Clone Sequence Records
BO07596.3prime Sequence
812 bp (761 high quality bases) assembled on 2006-01-06
> BO07596.3prime
ATGGTCTAGAAAGCTTGCCTCATCCTTGTTGTTGATGGCACGCAGGCGTT
CGAGCTCGGCACGCTCCTCCTTGTTGCGCAACAGGGGGACATTGTAGTCG
AAGGCGTAGAAGAAGCCCTTGGGCTCGCCGGTCTCCTCGGGTCCGGGCAC
ATATGGCGGCTCCTCGTGCACGTAGGGCTGGTACTCGGGCTCAGTGGGCT
GGTAGCGACCCTCCTGCTGGTACTCGGCGGCATAAGGATCGGGATTGTGG
CCAGCGGCGGCGGCCAGCTCACCCCACAGCTTGAAGTGCTCCTCCTCGGC
CTTGAGGACAGCCGGAGTCTTAGTGGCCGGCAGTTTAAGGTGTGCCGGAC
GATTGTCCTCCACATGGAAACCGGTCTTATCAGCATAATAGTTGGCCACA
AAGTCACGGCCATGTGGTTGGACATACTTGTACGATCCGGTCACTTTGCC
CGTCTCATCGCGCTTCTCGTTCTTGCCCTGGTTCCAATCCCTATAGCCAT
AGGCAAATTGACCCAAACCATCCTGACCATGATACTGATGGGCATCGTAG
TGCTCCTCCACATACTCCTCGGGATGCTCGATCACACGACCCATGTAGAC
GAACTCTCCCTTCTCGTTGCGCGCCTCGGGCAGGGGATTCTCACCGGTTT
TCGGGGCATACTCGATGTCGCCAATGCCACGCAGTTGGGCGCTGTTAAGG
AATTGCTGCGCCTCCTCGGGAGTTATGTTGATCTTGAAGATGTTCTCACC
GCTGGCTAGTGTGGCCAGCAACAGGGCAGCCAAGATGTAGCACTTCATGT
CGACTGATAACT
BO07596.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:06:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3672-PA | 783 | CG3672-RA | 1..780 | 798..19 | 3900 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:13:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67B-RA | 1010 | CG3672-RA | 93..872 | 798..19 | 3900 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:13:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9405289..9406036 | 766..19 | 3740 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 13:13:03 has no hits.
BO07596.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:23:32 Download gff for
BO07596.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3672-PA | 1..783 | 15..798 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:07:44 Download gff for
BO07596.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3672-PA | 1..783 | 15..798 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:07:00 Download gff for
BO07596.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67B-RA | 81..883 | 5..808 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:41:11 Download gff for
BO07596.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67B-RA | 81..883 | 5..808 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:41:11 Download gff for
BO07596.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9404877..9404921 | 766..808 | 91 | -> | Minus |
| 3L | 9405290..9406047 | 5..765 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:07:00 Download gff for
BO07596.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9397977..9398021 | 766..808 | 91 | -> | Minus |
| arm_3L | 9398390..9399147 | 5..765 | 99 | | Minus |
BO07596.5prime Sequence
812 bp (811 high quality bases) assembled on 2006-01-06
> BO07596.5prime
GAAGTTATCAGTCGACATGAAGTGCTACATCTTGGCTGCCCTGTTGCTGG
CCACACTAGCCAGCGGTGAGAACATCTTCAAGATCAACATAACTCCCGAG
GAGGCGCAGCAATTCCTTAACAGCGCCCAACTGCGTGGCATTGGCGACAT
CGAGTATGCCCCGAAAACCGGTGAGAATCCCCTGCCCGAGGCGCGCAACG
AGAAGGGAGAGTTCGTCTACATGGGTCGTGTGATCGAGCATCCCGAGGAG
TATGTGGAGGAGCACTACGATGCCCATCAGTATCATGGTCAGGATGGTTT
GGGTCAATTTGCCTATGGCTATAGGGATTGGAACCAGGGCAAGAACGAGA
AGCGCGATGAGACGGGCAAAGTGACCGGATCGTACAAGTATGTCCAACCA
CATGGCCGTGACTTTGTGGCCAACTATTATGCTGATAAGACCGGTTTCCA
TGTGGAGGACAATCGTCCGGCACACCTTAAACTGCCGGCCACTAAGACTC
CGGCTGTCCTCAAGGCCGAGGAGGAGCACTTCAAGCTGTGGGGTGAGCTG
GCCGCCGCCGCTGGCCACAATCCCGATCCTTATGCCGCCGAGTACCAGCA
GGAGGGTCGCTACCAGCCCACTGAGCCCGAGTACCAGCCCTACGTGCACG
AGGAGCCGCCATATGTGCCCGGACCCGAGGAGACCGGCGAGCCCAAGGGC
TTCTTCTACGCCTTCGACTACAATGTCCCCCTGTTGCGCAACAAGGAGGA
GCGTGCCGAGCTCGAACGCCTGCGTGCCATCAACAACAAGGATGAGGCAA
GCTTTCTAGACC
BO07596.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:06:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3672-PA | 783 | CG3672-RA | 1..780 | 17..796 | 3900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:33:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67B-RA | 1010 | CG3672-RA | 93..872 | 17..796 | 3900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:33:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9405289..9406036 | 49..796 | 3740 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 05:33:17 has no hits.
BO07596.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:23:33 Download gff for
BO07596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3672-PA | 1..783 | 17..800 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:07:45 Download gff for
BO07596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3672-PA | 1..783 | 17..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:04:14 Download gff for
BO07596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67B-RA | 81..883 | 7..810 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:46:20 Download gff for
BO07596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67B-RA | 81..883 | 7..810 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:46:20 Download gff for
BO07596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9404877..9404921 | 7..49 | 91 | -> | Plus |
| 3L | 9405290..9406047 | 50..810 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:04:14 Download gff for
BO07596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9397977..9398021 | 7..49 | 91 | -> | Plus |
| arm_3L | 9398390..9399147 | 50..810 | 99 | | Plus |
BO07596.complete Sequence
814 bp (814 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630852
> BO07596.complete
GAAGTTATCAGTCGACATGAAGTGCTACATCTTGGCTGCCCTGTTGCTGG
CCACACTAGCCAGCGGTGAGAACATCTTCAAGATCAACATAACTCCCGAG
GAGGCGCAGCAATTCCTTAACAGCGCCCAACTGCGTGGCATTGGCGACAT
CGAGTATGCCCCGAAAACCGGTGAGAATCCCCTGCCCGAGGCGCGCAACG
AGAAGGGAGAGTTCGTCTACATGGGTCGTGTGATCGAGCATCCCGAGGAG
TATGTGGAGGAGCACTACGATGCCCATCAGTATCATGGTCAGGATGGTTT
GGGTCAATTTGCCTATGGCTATAGGGATTGGAACCAGGGCAAGAACGAGA
AGCGCGATGAGACGGGCAAAGTGACCGGATCGTACAAGTATGTCCAACCA
CATGGCCGTGACTTTGTGGCCAACTATTATGCTGATAAGACCGGTTTCCA
TGTGGAGGACAATCGTCCGGCACACCTTAAACTGCCGGCCACTAAGACTC
CGGCTGTCCTCAAGGCCGAGGAGGAGCACTTCAAGCTGTGGGGTGAGCTG
GCCGCCGCCGCTGGCCACAATCCCGATCCTTATGCCGCCGAGTACCAGCA
GGAGGGTCGCTACCAGCCCACTGAGCCCGAGTACCAGCCCTACGTGCACG
AGGAGCCGCCATATGTGCCCGGACCCGAGGAGACCGGCGAGCCCAAGGGC
TTCTTCTACGCCTTCGACTACAATGTCCCCCTGTTGCGCAACAAGGAGGA
GCGTGCCGAGCTCGAACGCCTGCGTGCCATCAACAACAAGGATGAGGCAA
GCTTTCTAGACCAT
BO07596.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:51:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67B-RA | 783 | CG3672-PA | 1..780 | 17..796 | 3900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:51:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67B-RA | 1010 | CG3672-RA | 93..872 | 17..796 | 3900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:51:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9405289..9406036 | 49..796 | 3740 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 14:51:34 has no hits.
BO07596.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:00:48 Download gff for
BO07596.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67B-RA | 1..783 | 17..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:32:58 Download gff for
BO07596.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67B-RA | 83..885 | 7..810 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:46:07 Download gff for
BO07596.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67B-RA | 93..872 | 17..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:00:49 Download gff for
BO07596.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67B-RA | 83..885 | 7..810 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:54:17 Download gff for
BO07596.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67B-RA | 93..872 | 17..798 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:54:17 Download gff for
BO07596.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9404889..9404921 | 17..49 | 100 | -> | Plus |
| 3L | 9405290..9406036 | 50..798 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:46:07 Download gff for
BO07596.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9397989..9398021 | 17..49 | 100 | -> | Plus |
| arm_3L | 9398390..9399136 | 50..798 | 99 | | Plus |
BO07596.pep Sequence
Translation from 16 to 814
> BO07596.pep
MKCYILAALLLATLASGENIFKINITPEEAQQFLNSAQLRGIGDIEYAPK
TGENPLPEARNEKGEFVYMGRVIEHPEEYVEEHYDAHQYHGQDGLGQFAY
GYRDWNQGKNEKRDETGKVTGSYKYVQPHGRDFVANYYADKTGFHVEDNR
PAHLKLPATKTPAVLKAEEEHFKLWGELAAAAGHNPDPYAAEYQQEGRYQ
PTEPEYQPYVHEEPPYVPGPEETGEPKGFFYAFDYNVPLLRNKEERAELE
RLRAINNKDEASFLDH
BO07596.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:46:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67B-PA | 260 | CG3672-PA | 1..260 | 1..260 | 1417 | 100 | Plus |
