BO07615.3prime Sequence
942 bp (939 high quality bases) assembled on 2006-01-06
> BO07615.3prime
ATGGTCTAGAAAGCTGCAATGCCCCGCCTGACTGGTTTGGGTGCGAACAG
CACCTTTGCCGGCTTGCAGAGCTCCAGTTCGCTGCCGGGACGCACGGCCA
GGCACAGTTGGATCTCCACCAGCGACGACTCCGTCCAAACGCTGTGCGAC
AGCAGGATTGTGGTGCGCAGGCGCACATTGGTCTTGTGCTCGCCCTGCTC
CGTCATAATGGGCTTGAAGTCACTCTGCTTCGGCACCACGGTGTGCATGT
GCTGGTCCGGATACTTGATCTTGATCCGCATGTCCGCCTTCTGGGACTCC
AGCAGATTGTCGATTTCCGCAACAAAAGGAACGGCTGCTATCAGGCCAGC
CGTGACCTTAATTACATTATCCTGCGATTGCAGCGGACACGGCTCAAGGA
TGTTGGCCACACAGCGGCGTATTTTGTCATTGGCGGGTGGCAATGCAAGC
GGAGGAGCCTGCTGGACCAGCGGCAGAATTTCGCGAAAGACGCGACCCGG
CTTGGGATCCGATATGCCATCCAGTTTGATTAGCAGCTGGCGGGTGAAGC
TATCCGGCTGGGCATCCCTACTGACCGACTCTTTCATGGGCATATCGGTC
TCTACCACCGGTGGCTTCTCCTCCTCATCCTTCGTATTCGCCTTGATGAA
CTCACTTATATCGCCGGCGGTTTGCAAAAGCATCTGGCACGGGCCCAATG
CACTCTGTGAGCGATCCCTGACCACGAGGACCAAGTGAAGCGCGCAAGCC
CTCAGGCGCAGCTGCTTCACCTGCAAGATATCGCCGTAATTGAGGCCGGA
GAAAGTGTGCTGCAGCTTGAGACAGTTTCGGATGAGTGCTGCCAGTGATT
CTTCAAGGGCACCCTGCTTCGTTGCGTGCTGGCGCAACGCTGCATCTGTT
CGATCTGGATCTGGGCCGCCAAGAAGGTCTCTAGAAAGTTTG
BO07615.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:06:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12113-PA | 3069 | l(1)G0095-RA | 2233..3066 | 851..18 | 4170 | 100 | Minus |
CG12113-PA | 3069 | l(1)G0095-RA | 2141..2232 | 942..851 | 460 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:03:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
IntS4-RA | 3466 | CG12113-RA | 2224..3149 | 942..18 | 4605 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:03:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8555556..8556481 | 18..942 | 4580 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-12 10:03:09 has no hits.
BO07615.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:24:01 Download gff for
BO07615.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12113-PA | 2141..3069 | 14..942 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:08:22 Download gff for
BO07615.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12113-PA | 2141..3069 | 14..942 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:45:42 Download gff for
BO07615.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
IntS4-RA | 2224..3153 | 13..942 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:01:07 Download gff for
BO07615.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
IntS4-RA | 2224..3153 | 13..942 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:01:07 Download gff for
BO07615.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8555552..8556481 | 13..942 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:45:42 Download gff for
BO07615.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8449585..8450514 | 13..942 | 99 | | Plus |
BO07615.5prime Sequence
909 bp (873 high quality bases) assembled on 2006-01-06
> BO07615.5prime
GAAGTTATCAGTCGACATGGCGCTGGCCATTAAGAAGCGCGTAGGCACCT
ACGTGGAAACGGTGGACGGGTCGCCGCCGGTGAAGAAGCTGCGTCTGCAA
ACGCTGGCCGCTGATGCCAAGGGCGGGAAATCCGGAAAAGTGGGCAATGT
GGAGCGCAAGCTGACGGCGCTCAACCAATTGGACGCCTATGTGGGCAACC
TGCCCGCCGGTGCGTTGGTCCTGCCCACTGGGACACCAGTTGCTTCGACG
GGAGCCCCGTCAACAGGTGTCATCGGAAATCCGCCGGCTGCGGCGACTGG
AGCTCCCCCAATGACGGCCGCGAATAGCAGGGAACTGCTGGAGCTCTTGG
TCAAGATAACCGATGAGATATCCTATGAGGACGTGGAAATGGGCGAGCTT
AAGGAGGTGGCCAGCAAGATCTTCCAACTGTATCAGCTGCAGGAACGCGA
TAGCGACACCTCCATCCGGGTGAAGCTGCTCGAGCTGCTGTCCGGATTGG
GTTGCGAGTGTGCCACCGAGCAGGCGCTTACCATGATCATCGACTACTTT
ATCTTCTTGTTGAGGAAGGAGGTGTCCCAAAAGGTGCTCGCCCAGGGCAT
GATGTGCCTGTTTCGAATCGGGGAGCGCAGGAAGCACATGTTGCCCATAT
CGTACAAAACCCAGGTGGCCCACCTAGCCAAGGAGCAGCTGCGCTCCGGT
TCGGCGCATACGCAGAAGAACGCCATGCTGGTAATCGGTCGTTTTGCCAC
CAAAATGGAGGGTGAGCGTCATTACGTATGGAAGTTAGCCTTCTACATCG
ACTCGCANGACTCGAGCGTTCGTGCCCAGGCTCTGCACGCCCTGCTGACC
CTCGGCGAACGGGGATCCCAAACTGCCGCGGTGCTCTATAAGCGTGCCGT
CGAGGCCAT
BO07615.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:06:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12113-PA | 3069 | l(1)G0095-RA | 1..855 | 17..871 | 4256 | 99.8 | Plus |
CG12113-PA | 3069 | l(1)G0095-RA | 862..893 | 878..909 | 160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:47:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
IntS4-RA | 3466 | CG12113-RA | 83..976 | 16..909 | 4414 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:46:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8557806..8558699 | 909..16 | 4384 | 99.3 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:47:02 has no hits.
BO07615.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:24:02 Download gff for
BO07615.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12113-PA | 1..893 | 17..909 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:08:23 Download gff for
BO07615.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12113-PA | 1..893 | 17..909 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:07:42 Download gff for
BO07615.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
IntS4-RA | 83..976 | 16..909 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:27:53 Download gff for
BO07615.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
IntS4-RA | 83..976 | 16..909 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:27:53 Download gff for
BO07615.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8557806..8558699 | 16..909 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:07:42 Download gff for
BO07615.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8451839..8452732 | 16..909 | 99 | | Minus |