Clone BO07615 Report

Search the DGRC for BO07615

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:76
Well:15
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

BO07615.3prime Sequence

942 bp (939 high quality bases) assembled on 2006-01-06

> BO07615.3prime
ATGGTCTAGAAAGCTGCAATGCCCCGCCTGACTGGTTTGGGTGCGAACAG
CACCTTTGCCGGCTTGCAGAGCTCCAGTTCGCTGCCGGGACGCACGGCCA
GGCACAGTTGGATCTCCACCAGCGACGACTCCGTCCAAACGCTGTGCGAC
AGCAGGATTGTGGTGCGCAGGCGCACATTGGTCTTGTGCTCGCCCTGCTC
CGTCATAATGGGCTTGAAGTCACTCTGCTTCGGCACCACGGTGTGCATGT
GCTGGTCCGGATACTTGATCTTGATCCGCATGTCCGCCTTCTGGGACTCC
AGCAGATTGTCGATTTCCGCAACAAAAGGAACGGCTGCTATCAGGCCAGC
CGTGACCTTAATTACATTATCCTGCGATTGCAGCGGACACGGCTCAAGGA
TGTTGGCCACACAGCGGCGTATTTTGTCATTGGCGGGTGGCAATGCAAGC
GGAGGAGCCTGCTGGACCAGCGGCAGAATTTCGCGAAAGACGCGACCCGG
CTTGGGATCCGATATGCCATCCAGTTTGATTAGCAGCTGGCGGGTGAAGC
TATCCGGCTGGGCATCCCTACTGACCGACTCTTTCATGGGCATATCGGTC
TCTACCACCGGTGGCTTCTCCTCCTCATCCTTCGTATTCGCCTTGATGAA
CTCACTTATATCGCCGGCGGTTTGCAAAAGCATCTGGCACGGGCCCAATG
CACTCTGTGAGCGATCCCTGACCACGAGGACCAAGTGAAGCGCGCAAGCC
CTCAGGCGCAGCTGCTTCACCTGCAAGATATCGCCGTAATTGAGGCCGGA
GAAAGTGTGCTGCAGCTTGAGACAGTTTCGGATGAGTGCTGCCAGTGATT
CTTCAAGGGCACCCTGCTTCGTTGCGTGCTGGCGCAACGCTGCATCTGTT
CGATCTGGATCTGGGCCGCCAAGAAGGTCTCTAGAAAGTTTG

BO07615.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:06:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG12113-PA 3069 l(1)G0095-RA 2233..3066 851..18 4170 100 Minus
CG12113-PA 3069 l(1)G0095-RA 2141..2232 942..851 460 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:03:10
Subject Length Description Subject Range Query Range Score Percent Strand
IntS4-RA 3466 CG12113-RA 2224..3149 942..18 4605 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8555556..8556481 18..942 4580 99.9 Plus
Blast to na_te.dros performed on 2015-02-12 10:03:09 has no hits.

BO07615.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:24:01 Download gff for BO07615.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12113-PA 2141..3069 14..942 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:08:22 Download gff for BO07615.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12113-PA 2141..3069 14..942 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:45:42 Download gff for BO07615.3prime
Subject Subject Range Query Range Percent Splice Strand
IntS4-RA 2224..3153 13..942 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:01:07 Download gff for BO07615.3prime
Subject Subject Range Query Range Percent Splice Strand
IntS4-RA 2224..3153 13..942 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:01:07 Download gff for BO07615.3prime
Subject Subject Range Query Range Percent Splice Strand
X 8555552..8556481 13..942 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:45:42 Download gff for BO07615.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 8449585..8450514 13..942 99   Plus

BO07615.5prime Sequence

909 bp (873 high quality bases) assembled on 2006-01-06

> BO07615.5prime
GAAGTTATCAGTCGACATGGCGCTGGCCATTAAGAAGCGCGTAGGCACCT
ACGTGGAAACGGTGGACGGGTCGCCGCCGGTGAAGAAGCTGCGTCTGCAA
ACGCTGGCCGCTGATGCCAAGGGCGGGAAATCCGGAAAAGTGGGCAATGT
GGAGCGCAAGCTGACGGCGCTCAACCAATTGGACGCCTATGTGGGCAACC
TGCCCGCCGGTGCGTTGGTCCTGCCCACTGGGACACCAGTTGCTTCGACG
GGAGCCCCGTCAACAGGTGTCATCGGAAATCCGCCGGCTGCGGCGACTGG
AGCTCCCCCAATGACGGCCGCGAATAGCAGGGAACTGCTGGAGCTCTTGG
TCAAGATAACCGATGAGATATCCTATGAGGACGTGGAAATGGGCGAGCTT
AAGGAGGTGGCCAGCAAGATCTTCCAACTGTATCAGCTGCAGGAACGCGA
TAGCGACACCTCCATCCGGGTGAAGCTGCTCGAGCTGCTGTCCGGATTGG
GTTGCGAGTGTGCCACCGAGCAGGCGCTTACCATGATCATCGACTACTTT
ATCTTCTTGTTGAGGAAGGAGGTGTCCCAAAAGGTGCTCGCCCAGGGCAT
GATGTGCCTGTTTCGAATCGGGGAGCGCAGGAAGCACATGTTGCCCATAT
CGTACAAAACCCAGGTGGCCCACCTAGCCAAGGAGCAGCTGCGCTCCGGT
TCGGCGCATACGCAGAAGAACGCCATGCTGGTAATCGGTCGTTTTGCCAC
CAAAATGGAGGGTGAGCGTCATTACGTATGGAAGTTAGCCTTCTACATCG
ACTCGCANGACTCGAGCGTTCGTGCCCAGGCTCTGCACGCCCTGCTGACC
CTCGGCGAACGGGGATCCCAAACTGCCGCGGTGCTCTATAAGCGTGCCGT
CGAGGCCAT

BO07615.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:06:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG12113-PA 3069 l(1)G0095-RA 1..855 17..871 4256 99.8 Plus
CG12113-PA 3069 l(1)G0095-RA 862..893 878..909 160 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:47:05
Subject Length Description Subject Range Query Range Score Percent Strand
IntS4-RA 3466 CG12113-RA 83..976 16..909 4414 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:46:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8557806..8558699 909..16 4384 99.3 Minus
Blast to na_te.dros performed on 2015-02-10 15:47:02 has no hits.

BO07615.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:24:02 Download gff for BO07615.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12113-PA 1..893 17..909 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:08:23 Download gff for BO07615.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12113-PA 1..893 17..909 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:07:42 Download gff for BO07615.5prime
Subject Subject Range Query Range Percent Splice Strand
IntS4-RA 83..976 16..909 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:27:53 Download gff for BO07615.5prime
Subject Subject Range Query Range Percent Splice Strand
IntS4-RA 83..976 16..909 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:27:53 Download gff for BO07615.5prime
Subject Subject Range Query Range Percent Splice Strand
X 8557806..8558699 16..909 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:07:42 Download gff for BO07615.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 8451839..8452732 16..909 99   Minus