Clone BO07616 Report

Search the DGRC for BO07616

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:76
Well:16
Vector:pDNR-Dual
Associated Gene/TranscriptCG32982-RA
Protein status:BO07616.pep: validated full length
Sequenced Size:2179

Clone Sequence Records

BO07616.3prime Sequence

905 bp (864 high quality bases) assembled on 2006-01-06

> BO07616.3prime
ATGGTCTAGAAAGCTTGCTACACGCGTGGGCGTGCCATATATAGCCCCCG
ATCCGACTCCGGATCCGAGTCCACCATTATTCCGGCGCTGGGCGAGTGGC
GAGGCTGGTTGGGGAGTCGGTCCATTGTTGTTGTTGAGGCGACGCTGCTG
ACTGTCCGAATAGGCCCGCTCTCGAAACTTAAGGCCCTGGGCTTCGTTGA
TGATGGCGGCCAGGGCGGGATGTTGGTAGCGCTCCCGGAAAATGGCCGAT
CCGTTTATGCGATCCGATCCGTTGGTGTTGCCATTCAGGGTGCCCATGTT
CCCATTCCCATTGCCATAGTGCATCATCGTCAGTTTGTGCTGCGGCGTAT
GCTGTGGCGTCAGTGATGTGGGGGGCGTGGCATTACCGTTCTTATAGTAG
CGATTCTGGTTGGGATCGTAAGTGGCCTGCTCCTGATTCTGATTGAGACG
ATTGGCCATCTTGATGGAGGCACAGCGATCCTCCTCGTTGTTGCGCATCT
TCAAGATGCGTTGATCTTGGGTGCTCAGCTTTTTGGCTCGAAAACTGCCG
CCTGGCGATGAGTTATTCAGCAGTGTTCCCCTCGACGAACTGCCATTGGT
CTCTGTGCTGTCCCTGCTCGCCTCCCGGTAGCTCGAGGGGCGGTGCGTCG
ATGGGGGCGTGTCCAGGCCACTATCATGGGCCGAACAGTCCAGTTCGGTT
TTGGCCAGCCCGATGTTGCTGCCGCCGCCAGTGGGTAACATTGGTTGAAC
TGAGTGCCTCATATCAGTGGGCGCCCTTGGCTTCCGGTACAGCCAATCGC
GGTCCAGTTCGTTGCCATTATCCGGAGTAGCGCTAACTCCCCGGAACAGT
CTGGGTCTCCTCAGCTGAACCTCCGTCTCCTCGGTCTCCTCATCCACCAC
CTGAT

BO07616.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:06:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-PA 2148 CG32982-RA 1259..2145 905..19 4435 100 Minus
CG32982-PB 1653 CG32982-RB 842..1231 905..516 1950 100 Minus
CG32982-PC 1716 CG32982-RC 905..1294 905..516 1950 100 Minus
CG32982-PB 1653 CG32982-RB 1285..1631 516..170 1735 100 Minus
CG32982-PC 1716 CG32982-RC 1348..1694 516..170 1735 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:03:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-RF 2931 CG32982-RF 1770..2656 905..19 4435 100 Minus
CG32982-RG 2766 CG32982-RG 1605..2491 905..19 4435 100 Minus
CG32982-RA 2761 CG32982-RA 1605..2491 905..19 4435 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:03:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9162363..9162708 516..171 1730 100 Minus
2L 23513712 2L 9162074..9162309 751..516 1180 100 Minus
2L 23513712 2L 9161857..9162012 905..750 780 100 Minus
2L 23513712 2L 9163293..9163446 172..19 770 100 Minus
Blast to na_te.dros performed on 2015-02-12 10:03:14 has no hits.

BO07616.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:24:03 Download gff for BO07616.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-PA 1259..2148 18..905 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:08:25 Download gff for BO07616.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-PA 1259..2148 18..905 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:45:43 Download gff for BO07616.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 1605..2495 13..905 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:01:14 Download gff for BO07616.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 1605..2495 13..905 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:01:14 Download gff for BO07616.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 9161857..9162012 750..905 100 -> Minus
2L 9162076..9162308 517..749 100 -> Minus
2L 9162363..9162708 171..516 100 -> Minus
2L 9163295..9163450 13..170 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:45:43 Download gff for BO07616.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9161857..9162012 750..905 100 -> Minus
arm_2L 9162076..9162308 517..749 100 -> Minus
arm_2L 9162363..9162708 171..516 100 -> Minus
arm_2L 9163295..9163450 13..170 98   Minus

BO07616.5prime Sequence

948 bp (828 high quality bases) assembled on 2006-01-06

> BO07616.5prime
GAAGTTATCAGTCGACATGCTCATGCACACAACATCAATTTCCACAACGT
CGACGGCCACCATGACCAACTCATCGTCCTCCGCCACGCCCACACCCGGG
TCGACTTCCTCCAACAACAGTGCCACGCTCGACGCGCTGCACCAGCAACA
ACAGCAGCAGCACCAGCAGCATCAGCTGCAGCAACAACTGCAGCAGTTGC
ACACGAACGCCGCAAACAATTCACGGCCCCCCTCACGTGCCCCCTCCATT
CTGGACAGTCCGACCCTGGCGCGTGTGGAGCGGGCTCGTCTGCGACTGGA
GCAGCAGGAGCGGGAGCGGGAACGGGAGCGTAGCAGCCAGCGGGAGGTGG
GCGGCGGCAGCGGAGGAGGCGGCGGCGGTGGTAGCAGCACTGGCACTGGC
AGCACCGCCACAACCATGAATCGTGAGGATAGCCTGGAGCGCAGTATTTT
GGATCCCAAGCAATCCTTGCTGGCAGGACGCATTCCGGTGGCCTCCATGA
CAGGACCCATTAAACGCGGACTGCTCTGGCAGCAAAGGGATCGGCTCTTC
TCTCGCTGGAAGGAGCGATACTTTGTGCTCACTCGTGACTACTTGCACTG
CTTCAAAAGAGCCTCGGGATCGGCCAATGAACGTGCCTCGGATATGGGAC
AGTTTATCTTCAAGGTCAAGCTGGTGGACGTGGAGAAGGTGGAGTGGCTG
AATCGGCGCTCCTACAGCGCCATTGGTCTGCTACTGGGTCGCGAGGGTCG
TGTTCTACTCCGCTGCGATGATGGCCTCGAGGATTGGTTCGAGCTGCTGG
AGGAATGCACAATGACCTCCAAGGAGCGCAGACGAGCCCTGAAGATTGCC
CAAGGACCCAGATCCCGAGCCTCATTGGCTGCTCCCGTTTCGCATGCTTC
GCTGCAGTTCCAGCATTTTGGACTCGGAGGCACTTACTCGAGTGCCCT

BO07616.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:06:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-PA 2148 CG32982-RA 1..932 17..948 4660 100 Plus
CG32982-PB 1653 CG32982-RB 27..515 460..948 2445 100 Plus
CG32982-PC 1716 CG32982-RC 91..578 461..948 2440 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:15:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-RG 2766 CG32982-RG 347..1278 17..948 4660 100 Plus
CG32982-RA 2761 CG32982-RA 347..1278 17..948 4660 100 Plus
CG32982-RH 2682 CG32982-RH 347..995 17..665 3245 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:15:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9127023..9127466 17..460 2220 100 Plus
2L 23513712 2L 9161383..9161530 801..948 740 100 Plus
2L 23513712 2L 9161129..9161269 663..803 705 100 Plus
2L 23513712 2L 9154657..9154765 459..567 545 100 Plus
2L 23513712 2L 9156497..9156596 567..666 500 100 Plus
Blast to na_te.dros performed on 2015-02-12 07:15:25 has no hits.

BO07616.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:24:04 Download gff for BO07616.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-PA 1..932 17..948 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:08:26 Download gff for BO07616.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-PA 1..932 17..948 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:36:45 Download gff for BO07616.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 347..1278 17..948 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:23:52 Download gff for BO07616.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 347..1278 17..948 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:23:52 Download gff for BO07616.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 9127023..9127466 17..460 100 -> Plus
2L 9154659..9154765 461..567 100 -> Plus
2L 9156498..9156594 568..664 100 -> Plus
2L 9161131..9161268 665..802 100 -> Plus
2L 9161385..9161530 803..948 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:36:45 Download gff for BO07616.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9156498..9156594 568..664 100 -> Plus
arm_2L 9161131..9161268 665..802 100 -> Plus
arm_2L 9161385..9161530 803..948 100   Plus
arm_2L 9127023..9127466 17..460 100 -> Plus
arm_2L 9154659..9154765 461..567 100 -> Plus

BO07616.complete Sequence

2179 bp (2179 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ630862

> BO07616.complete
GAAGTTATCAGTCGACATGCTCATGCACACAACATCAATTTCCACAACGT
CGACGGCCACCATGACCAACTCATCGTCCTCCGCCACGCCCACACCCGGG
TCGACTTCCTCCAACAACAGTGCCACGCTCGACGCGCTGCACCAGCAACA
ACAGCAGCAGCACCAGCAGCATCAGCTGCAGCAACAACTGCAGCAGTTGC
ACACGAACGCCGCAAACAATTCACGGCCCCCCTCACGTGCCCCCTCCATT
CTGGACAGTCCGACCCTGGCGCGTGTGGAGCGGGCTCGTCTGCGACTGGA
GCAGCAGGAGCGGGAGCGGGAACGGGAGCGTAGCAGCCAGCGGGAGGTGG
GCGGCGGCAGCGGAGGAGGCGGCGGCGGTGGTAGCAGCACTGGCACTGGC
AGCACCGCCACAACCATGAATCGTGAGGATAGCCTGGAGCGCAGTATTTT
GGATCCCAAGCAATCCTTGCTGGCAGGACGCATTCCGGTGGCCTCCATGA
CAGGACCCATTAAACGCGGACTGCTCTGGCAGCAAAGGGATCGGCTCTTC
TCTCGCTGGAAGGAGCGATACTTTGTGCTCACTCGTGACTACTTGCACTG
CTTCAAAAGAGCCTCGGGATCGGCCAATGAACGTGCCTCGGATATGGGAC
AGTTTATCTTCAAGGTCAAGCTGGTGGACGTGGAGAAGGTGGAGTGGCTG
AATCGGCGCTCCTACAGCGCCATTGGTCTGCTACTGGGTCGCGAGGGTCG
TGTTCTACTCCGCTGCGATGATGGCCTCGAGGATTGGTTCGAGCTGCTGG
AGGAATGCACAATGACCTCCAAGGAGCGCAGACGAGCCCTGAAGATTGCC
CAAGGACCCAGATCCCGAGCCTCATTGGCTGCTCCCGTTTCGCATGCTTC
GCTGCAGTTCCAGCATTTTGGACTCGGAGGCACTTACTCGAGTGCCCTGG
ACGATTGGCTGATGACGAATGGAACCGGTGGTCTGGCCCGGCACAAGATT
GGAGCTGGCAGTCTGAACGGTTATGGCGGGGCCAATCCCTTCCTGTTCTC
CGATTCGGTGCCGGATCTGAGTGCCCTGAACAACGAAAACCACAATCATC
ACCTGAGCGGCATCAGCACGAACCACTCGACGCCGCAAAAGATACCGCAC
CACAGCAATGCGAATCTCAGTCGATACTCCAATGGATATGTCTCGGCCCA
GAACAGTTTCACCCAAGCCGGAGCACTCTACGGATCGCCTAGGCGGATCT
TTATCAACAGCAGCTTCGGTTCCAATCAGGTGGTGGATGAGGAGACCGAG
GAGACGGAGGTTCAGCTGAGGAGACCCAGACTGTTCCGGGGAGTTAGCGC
TACTCCGGATAATGGCAACGAACTGGACCGCGATTGGCTGTACCGGAAGC
CAAGGGCGCCCACTGATATGAGGCACTCAGTTCAACCAATGTTACCCACT
GGCGGCGGCAGCAACATCGGGCTGGCCAAAACCGAACTGGACTGTTCGGC
CCATGATAGTGGCCTGGACACGCCCCCATCGACGCACCGCCCCTCGAGCT
ACCGGGAGGCGAGCAGGGACAGCACAGAGACCAATGGCAGTTCGTCGAGG
GGAACACTGCTGAATAACTCATCGCCAGGCGGCAGTTTTCGAGCCAAAAA
GCTGAGCACCCAAGATCAACGCATCTTGAAGATGCGCAACAACGAGGAGG
ATCGCTGTGCCTCCATCAAGATGGCCAATCGTCTCAATCAGAATCAGGAG
CAGGCCACTTACGATCCCAACCAGAATCGCTACTATAAGAACGGTAATGC
CACGCCCCCCACATCACTGACGCCACAGCATACGCCGCAGCACAAACTGA
CGATGATGCACTATGGCAATGGGAATGGGAACATGGGCACCCTGAATGGC
AACACCAACGGATCGGATCGCATAAACGGATCGGCCATTTTCCGGGAGCG
CTACCAACATCCCGCCCTGGCCGCCATCATCAACGAAGCCCAGGGCCTTA
AGTTTCGAGAGCGGGCCTATTCGGACAGTCAGCAGCGTCGCCTCAACAAC
AACAATGGACCGACTCCCCAACCAGCCTCGCCACTCGCCCAGCGCCGGAA
TAATGGTGGACTCGGATCCGGAGTCGGATCGGGGGCTATATATGGCACGC
CCACGCGTGTAGCAAGCTTTCTAGACCAT

BO07616.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:31:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-RG 2163 CG32982-PG 1..2145 17..2161 10725 100 Plus
CG32982-RA 2148 CG32982-PA 1..2145 17..2161 10725 100 Plus
CG32982-RF 2193 CG32982-PF 490..2190 461..2161 8505 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:31:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-RG 2766 CG32982-RG 347..2491 17..2161 10725 100 Plus
CG32982-RA 2761 CG32982-RA 347..2491 17..2161 10725 100 Plus
CG32982-RF 2931 CG32982-RF 956..2656 461..2161 8505 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:31:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9161383..9162012 801..1430 3150 100 Plus
2L 23513712 2L 9127023..9127466 17..460 2220 100 Plus
2L 23513712 2L 9162363..9162708 1664..2009 1730 100 Plus
2L 23513712 2L 9162074..9162309 1429..1664 1180 100 Plus
2L 23513712 2L 9163293..9163446 2008..2161 770 100 Plus
2L 23513712 2L 9161129..9161269 663..803 705 100 Plus
2L 23513712 2L 9154657..9154765 459..567 545 100 Plus
2L 23513712 2L 9156497..9156596 567..666 500 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:31:45 has no hits.

BO07616.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:02:42 Download gff for BO07616.complete
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 1..2148 17..2162 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:54:52 Download gff for BO07616.complete
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 333..2477 17..2163 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:49 Download gff for BO07616.complete
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 347..2491 17..2163 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:02:42 Download gff for BO07616.complete
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 333..2481 17..2167 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:19:57 Download gff for BO07616.complete
Subject Subject Range Query Range Percent Splice Strand
CG32982-RA 347..2491 17..2163 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:19:57 Download gff for BO07616.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9154659..9154765 461..567 100 -> Plus
2L 9156498..9156594 568..664 100 -> Plus
2L 9161131..9161268 665..802 100 -> Plus
2L 9127023..9127466 17..460 100 -> Plus
2L 9161385..9162012 803..1430 100 -> Plus
2L 9162076..9162308 1431..1663 100 -> Plus
2L 9162363..9162708 1664..2009 100 -> Plus
2L 9163295..9163446 2010..2163 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:49 Download gff for BO07616.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9161131..9161268 665..802 100 -> Plus
arm_2L 9163295..9163446 2010..2163 98   Plus
arm_2L 9127023..9127466 17..460 100 -> Plus
arm_2L 9154659..9154765 461..567 100 -> Plus
arm_2L 9156498..9156594 568..664 100 -> Plus
arm_2L 9161385..9162012 803..1430 100 -> Plus
arm_2L 9162076..9162308 1431..1663 100 -> Plus
arm_2L 9162363..9162708 1664..2009 100 -> Plus

BO07616.pep Sequence

Translation from 16 to 2179

> BO07616.pep
MLMHTTSISTTSTATMTNSSSSATPTPGSTSSNNSATLDALHQQQQQQHQ
QHQLQQQLQQLHTNAANNSRPPSRAPSILDSPTLARVERARLRLEQQERE
RERERSSQREVGGGSGGGGGGGSSTGTGSTATTMNREDSLERSILDPKQS
LLAGRIPVASMTGPIKRGLLWQQRDRLFSRWKERYFVLTRDYLHCFKRAS
GSANERASDMGQFIFKVKLVDVEKVEWLNRRSYSAIGLLLGREGRVLLRC
DDGLEDWFELLEECTMTSKERRRALKIAQGPRSRASLAAPVSHASLQFQH
FGLGGTYSSALDDWLMTNGTGGLARHKIGAGSLNGYGGANPFLFSDSVPD
LSALNNENHNHHLSGISTNHSTPQKIPHHSNANLSRYSNGYVSAQNSFTQ
AGALYGSPRRIFINSSFGSNQVVDEETEETEVQLRRPRLFRGVSATPDNG
NELDRDWLYRKPRAPTDMRHSVQPMLPTGGGSNIGLAKTELDCSAHDSGL
DTPPSTHRPSSYREASRDSTETNGSSSRGTLLNNSSPGGSFRAKKLSTQD
QRILKMRNNEEDRCASIKMANRLNQNQEQATYDPNQNRYYKNGNATPPTS
LTPQHTPQHKLTMMHYGNGNGNMGTLNGNTNGSDRINGSAIFRERYQHPA
LAAIINEAQGLKFRERAYSDSQQRRLNNNNGPTPQPASPLAQRRNNGGLG
SGVGSGAIYGTPTRVASFLDH

BO07616.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:35:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG32982-PG 720 CG32982-PG 1..715 1..715 3736 100 Plus
CG32982-PA 715 CG32982-PA 1..715 1..715 3736 100 Plus
CG32982-PF 730 CG32982-PF 1..730 1..715 3710 97.9 Plus
CG32982-PH 687 CG32982-PH 1..687 1..715 3411 91.3 Plus
CG32982-PD 778 CG32982-PD 1..774 1..667 2717 72.7 Plus