Clone Sequence Records
BO07626.3prime Sequence
862 bp (817 high quality bases) assembled on 2006-01-06
> BO07626.3prime
ATGGTCTAGAAAGCTTGCGGACATTGTTTCGCGGCGCTCCTTCTTCTTCG
ATTTGCTCCGCTTGGCTGGCTGCGGCTTCTGCTCCTTCACTTCCTTCGCA
GACGTCTCTTCGAGAATCCGCTGGAAGAGCAGCGCACTGGTTTGCCCGTC
CAATTGACGGCTCTCGCCGAGTCCCGCAGGACTGTTGGAGCTGTTGGGGC
TGGTGGCAAAACTCTCGGCCAAGTAATTCCAGCCACGTTGCGCGGTGGGG
ACGCTCAGCTTATCGAGCAGCCGGTTGGCCAGCTGGGGAATTATGGGCTG
CAACACAATGCCGCTGAGCCGCAACGCGTCCATTGTCATGGCGATTATGG
TCTCCAAACGGGCCTGGTTGCCATCCGGTGCTCCCGCCTTTAGCGTCCAG
GGCTTGGAGCTCTCGAAGAAGTTGTTGGCCGCATGCAGAGCCGCCATCGT
TGTGTCGGCCACCAAGTGGAAGTGATTGCACTCATAATGCGACTCGCATC
GCTCTGACAGCTGCAGAAGCGAATCCTGCAGGCGTTTTGCCACATCCAGG
CTCCGGAGGAGATCCGCCAAGTGCTCCGCGCTGGGTGATGGATAGATTTG
GCCGGGATTCAGCGACTTGGCACTGGCACGCGATAGCAGATTGCCCAGGG
TGTCCGCCAGCTCCGAGTTGAGGATGCGCTGCGCCTTTACGTGGCTGTAG
TTGCCATCGCTGTGGGCCACGCCCTCCCGCAGAAGGAAGTATCGCAGGCC
CTCCATGGTGTACTGCTGCGCTGCCTGGAGGGGATCCACCACGTTGTGCT
TGCTCTTTGACATCTTCTGCCCCTCGACGGGTCCATGCGAGTGAACGTAC
AGCTGTCCAGGA
BO07626.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:06:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31322-PA | 1749 | Aats-met-RA | 935..1746 | 830..19 | 4035 | 99.8 | Minus |
| CG31322-PA | 1749 | Aats-met-RA | 903..930 | 862..835 | 140 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:38:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-met-RC | 4314 | CG31322-RC | 987..1830 | 862..19 | 4160 | 99.6 | Minus |
| Aats-met-RB | 2337 | CG31322-RB | 987..1830 | 862..19 | 4160 | 99.6 | Minus |
| Aats-met-RA | 1862 | CG31322-RA | 987..1830 | 862..19 | 4160 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:38:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14251527..14252014 | 19..506 | 2440 | 100 | Plus |
| 3R | 32079331 | 3R | 14252631..14252828 | 504..701 | 990 | 100 | Plus |
| 3R | 32079331 | 3R | 14258631..14258791 | 702..862 | 745 | 97.5 | Plus |
Blast to na_te.dros performed on 2015-02-12 23:38:22 has no hits.
BO07626.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:24:22 Download gff for
BO07626.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31322-PA | 904..1749 | 16..861 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:08:50 Download gff for
BO07626.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31322-PA | 904..1749 | 16..861 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:27:10 Download gff for
BO07626.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-met-RA | 988..1835 | 14..861 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:34:01 Download gff for
BO07626.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-met-RA | 988..1835 | 14..861 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:34:01 Download gff for
BO07626.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14251522..14252011 | 14..503 | 99 | <- | Plus |
| 3R | 14252631..14252828 | 504..701 | 100 | <- | Plus |
| 3R | 14258631..14258790 | 702..861 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:27:10 Download gff for
BO07626.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10077244..10077733 | 14..503 | 99 | <- | Plus |
| arm_3R | 10078353..10078550 | 504..701 | 100 | <- | Plus |
| arm_3R | 10084353..10084512 | 702..861 | 98 | | Plus |
BO07626.5prime Sequence
873 bp (793 high quality bases) assembled on 2006-01-06
> BO07626.5prime
GAAGTTATCAGTCGACATGCTTATTAGAAGAATTAAGTGCCTCAGATATT
TGGGAACTCGCTACAACAGTTCGCACTATGTGACAACTCCAATTTTCTAT
GTAAATGCAGCTCCTCACATTGGACACCTGTACTCAGCGGTCATAGCCGA
TGCCCACTGTCGCTACCAGAGGCTAAGGTATCCAGAGCAGGATGTACGAC
TCTGCACGGGAACGGATGAGCACGGCACAAAGATCCAGCAGGCGGCATCT
CTTCACGGGGTGCCCGTTGCCAAATACTGTGATGATATATCGCAGCGATA
TCGAGAGGTCTTCCGCAGTGCCAGCATCCAGCAGGATGACTTTATTCGCA
CCACGGAGGATCGCCACAAGCGGGCAGTGGCCAATTTCTGGCGCACACTT
CACACACGCGGCCACATATATTCGGCCGCCTACAGTGGTTGGTATTGCGT
GTCTGACGAAACCTTCCTCACCGACTCCCAGCTGAGATTGGACGAGGCCA
CTGGTACCCGATACTCCCTGGAATCTGGACATCCCGTCGAGTGGACCGAG
GAAACGAACTATATGTTTCGACTGTCACAATTCCAGGACGATGTGCGCCA
TTGGGTGAAAACGGAGGCGCGCGTACGTCCGGCCAAGTTCGAAAAGATTC
TGCTGGATACGCTCAGCGAACCACTGCCGGATGTATCGGTATCACGTCCT
TCCAACCGCGTACACTGGGCCATTCCCGTTCCCGATGATGACTCGCAGAC
TGTCTACGTCTGGTTAGATGCTTTAGTCAACTATCTCAGCTCTGTGGGAT
ATCCAGATGAAAAGTTTTCTGCCCACTGGCCACCGGCGCAGCAAGTGATA
GGGAAAGACATCCCTCAGTTCCA
BO07626.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:06:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31322-PA | 1749 | Aats-met-RA | 1..847 | 17..863 | 4210 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:39:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-met-RC | 4314 | CG31322-RC | 85..941 | 17..873 | 4225 | 99.7 | Plus |
| Aats-met-RB | 2337 | CG31322-RB | 85..941 | 17..873 | 4225 | 99.7 | Plus |
| Aats-met-RA | 1862 | CG31322-RA | 85..941 | 17..873 | 4225 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:39:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14258963..14259386 | 814..391 | 2120 | 100 | Minus |
| 3R | 32079331 | 3R | 14259467..14259749 | 391..109 | 1415 | 100 | Minus |
| 3R | 32079331 | 3R | 14259814..14259907 | 110..17 | 470 | 100 | Minus |
| 3R | 32079331 | 3R | 14258837..14258897 | 873..813 | 245 | 93.4 | Minus |
Blast to na_te.dros performed on 2015-02-09 19:39:38 has no hits.
BO07626.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:24:23 Download gff for
BO07626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31322-PA | 1..856 | 17..872 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:08:51 Download gff for
BO07626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31322-PA | 1..856 | 17..872 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:09:57 Download gff for
BO07626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-met-RA | 77..940 | 5..872 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:20:51 Download gff for
BO07626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-met-RA | 77..940 | 5..872 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:20:51 Download gff for
BO07626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14258838..14258895 | 815..872 | 94 | <- | Minus |
| 3R | 14258963..14259385 | 392..814 | 100 | <- | Minus |
| 3R | 14259467..14259747 | 111..391 | 100 | <- | Minus |
| 3R | 14259814..14259909 | 17..110 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:09:57 Download gff for
BO07626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10084560..10084617 | 815..872 | 94 | <- | Minus |
| arm_3R | 10084685..10085107 | 392..814 | 100 | <- | Minus |
| arm_3R | 10085189..10085469 | 111..391 | 100 | <- | Minus |
| arm_3R | 10085536..10085631 | 17..110 | 97 | <- | Minus |
BO07626.complete Sequence
1780 bp (1780 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ630864
> BO07626.complete
GAAGTTATCAGTCGACATGCTTATTAGAAGAATTAAGTGCCTCAGATATT
TGGGAACTCGCTACAACAGTTCGCACTATGTGACAACTCCAATTTTCTAT
GTAAATGCAGCTCCTCACATTGGACACCTGTACTCAGCGGTCATAGCCGA
TGCCCACTGTCGCTACCAGAGGCTAAGGTATCCAGAGCAGGATGTACGAC
TCTGCACGGGAACGGATGAGCACGGCACAAAGATCCAGCAGGCGGCATCT
CTTCACGGGGTGCCCGTTGCCAAATACTGTGATGATATATCGCAGCGATA
TCGAGAGGTCTTCCGCAGTGCCAGCATCCAGCAGGATGACTTTATTCGCA
CCACGGAGGATCGCCACAAGCGGGCAGTGGCCAATTTCTGGCGCACACTT
CACACACGCGGCCACATATATTCGGCCGCCTACAGTGGTTGGTATTGCGT
GTCTGACGAAACCTTCCTCACCGACTCCCAGCTGAGATTGGACGAGGCCA
CTGGTACCCGATACTCCCTGGAATCTGGACATCCCGTCGAGTGGACCGAG
GAAACGAACTATATGTTTCGACTGTCACAATTCCAGGACGATGTGCGCCA
TTGGGTGAAAACGGAGGCGCGCGTACGTCCGGCCAAGTTCGAAAAGATTC
TGCTGGATACGCTCAGCGAACCACTGCCGGATGTATCGGTATCACGTCCT
TCCAACCGCGTACACTGGGCCATTCCCGTTCCCGATGATGACTCGCAGAC
TGTCTACGTCTGGTTAGATGCTTTAGTCAACTATCTCAGCTCTGTGGGAT
ATCCAGATGAAAAGTTTTCTGCCCACTGGCCACCGGCGCAGCAAGTGATA
GGGAAGGACATCCTCAAGTTCCATGGCATTTACTGGACAGCTTTCCTCCT
GGCTGCCGGCTTGGAACCTCCTGGACAGCTGTACGTTCACTCGCATTGGA
CCGTCGATGGGCAGAAGATGTCAAAGAGCAAGCACAACGTGGTGGATCCC
CTCCAGGCAGCGCAGCAGTACACCATGGAGGGCCTGCGATACTTCCTTCT
GCGGGAGGGCGTGGCCCACAGCGATGGCAACTACAGCCACGTAAAGGCGC
AGCGCATCCTCAACTCGGAGCTGGCGGACACCCTGGGCAATCTGCTATCG
CGTGCCAGTGCCAAGTCGCTGAATCCCGGCCAAATCTATCCATCACCCAG
CGCGGAGCACTTGGCGGATCTCCTCCGGAGCCTGGATGTGGCAAAACGCC
TGCAGGATTCGCTTCTGCAGCTGTCAGAGCGATGCGAGTCGCATTATGAG
TGCAATCACTTCCACTTGGTGGCCGACACAACGATGGCGGCTCTGCATGC
GGCCAACAACTTCTTCGAGAGCTCCAAGCCCTGGACGCTAAAGGCGGGAG
CACCGGATGGCAACCAGGCCCGTTTGGAGACCATAATCGCCATGACAATG
GACGCGTTGCGGCTCAGCGGCATTGTGTTGCAGCCCATAATTCCCCAGCT
GGCCAACCGGCTGCTCGATAAGCTGAGCGTCCCCACCGCGCAACGTGGCT
GGAATTACTTGGCCGAGAGTTTTGCCACCAGCCCCAACAGCTCCAACAGT
CCTGCGGGACTCGGCGAGAGCCGTCAATTGGACGGGCAAACCAGTGCGCT
GCTCTTCCAGCGGATTCTCGAAGAGACGTCTGCGAAGGAAGTGAAGGAGC
AGAAGCCGCAGCCAGCCAAGCGGAGCAAATCGAAGAAGAAGGAGCGCCGC
GAAACAATGTCCGCAAGCTTTCTAGACCAT
BO07626.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:02:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-met-RC | 1749 | CG31322-PC | 1..1746 | 17..1762 | 8730 | 100 | Plus |
| Aats-met-RB | 1749 | CG31322-PB | 1..1746 | 17..1762 | 8730 | 100 | Plus |
| Aats-met-RA | 1749 | CG31322-PA | 1..1746 | 17..1762 | 8730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-met-RC | 4314 | CG31322-RC | 85..1830 | 17..1762 | 8730 | 100 | Plus |
| Aats-met-RB | 2337 | CG31322-RB | 85..1830 | 17..1762 | 8730 | 100 | Plus |
| Aats-met-RA | 1862 | CG31322-RA | 85..1830 | 17..1762 | 8730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14251527..14252014 | 1762..1275 | 2440 | 100 | Minus |
| 3R | 32079331 | 3R | 14258963..14259386 | 814..391 | 2120 | 100 | Minus |
| 3R | 32079331 | 3R | 14259467..14259749 | 391..109 | 1415 | 100 | Minus |
| 3R | 32079331 | 3R | 14258631..14258897 | 1079..813 | 1335 | 100 | Minus |
| 3R | 32079331 | 3R | 14252631..14252828 | 1277..1080 | 990 | 100 | Minus |
| 3R | 32079331 | 3R | 14259814..14259907 | 110..17 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:02:28 has no hits.
BO07626.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:02:43 Download gff for
BO07626.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-met-RA | 1..1749 | 17..1765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:21:40 Download gff for
BO07626.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-met-RA | 72..1830 | 5..1767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:43:02 Download gff for
BO07626.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-met-RA | 85..1830 | 17..1764 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:02:43 Download gff for
BO07626.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-met-RA | 72..1830 | 5..1767 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:16:58 Download gff for
BO07626.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-met-RA | 85..1830 | 17..1764 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:16:58 Download gff for
BO07626.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14259814..14259907 | 17..110 | 100 | | Minus |
| 3R | 14252631..14252828 | 1080..1277 | 100 | <- | Minus |
| 3R | 14258631..14258895 | 815..1079 | 100 | <- | Minus |
| 3R | 14258963..14259385 | 392..814 | 100 | <- | Minus |
| 3R | 14259467..14259747 | 111..391 | 100 | <- | Minus |
| 3R | 14251524..14252011 | 1278..1764 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:43:02 Download gff for
BO07626.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10084353..10084617 | 815..1079 | 100 | <- | Minus |
| arm_3R | 10078353..10078550 | 1080..1277 | 100 | <- | Minus |
| arm_3R | 10077246..10077733 | 1278..1764 | 99 | <- | Minus |
| arm_3R | 10084685..10085107 | 392..814 | 100 | <- | Minus |
| arm_3R | 10085189..10085469 | 111..391 | 100 | <- | Minus |
| arm_3R | 10085536..10085629 | 17..110 | 100 | | Minus |
BO07626.pep Sequence
Translation from 16 to 1780
> BO07626.pep
MLIRRIKCLRYLGTRYNSSHYVTTPIFYVNAAPHIGHLYSAVIADAHCRY
QRLRYPEQDVRLCTGTDEHGTKIQQAASLHGVPVAKYCDDISQRYREVFR
SASIQQDDFIRTTEDRHKRAVANFWRTLHTRGHIYSAAYSGWYCVSDETF
LTDSQLRLDEATGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKTE
ARVRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDDDSQTVYVWL
DALVNYLSSVGYPDEKFSAHWPPAQQVIGKDILKFHGIYWTAFLLAAGLE
PPGQLYVHSHWTVDGQKMSKSKHNVVDPLQAAQQYTMEGLRYFLLREGVA
HSDGNYSHVKAQRILNSELADTLGNLLSRASAKSLNPGQIYPSPSAEHLA
DLLRSLDVAKRLQDSLLQLSERCESHYECNHFHLVADTTMAALHAANNFF
ESSKPWTLKAGAPDGNQARLETIIAMTMDALRLSGIVLQPIIPQLANRLL
DKLSVPTAQRGWNYLAESFATSPNSSNSPAGLGESRQLDGQTSALLFQRI
LEETSAKEVKEQKPQPAKRSKSKKKERRETMSASFLDH
BO07626.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:35:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-met-PC | 582 | CG31322-PC | 1..582 | 1..582 | 3061 | 100 | Plus |
| Aats-met-PB | 582 | CG31322-PB | 1..582 | 1..582 | 3061 | 100 | Plus |
| Aats-met-PA | 582 | CG31322-PA | 1..582 | 1..582 | 3061 | 100 | Plus |
| CG15100-PA | 1022 | CG15100-PA | 258..764 | 22..504 | 274 | 23.5 | Plus |
