Clone BO07633 Report

Search the DGRC for BO07633

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:76
Well:33
Vector:pDNR-Dual
Associated Gene/TranscriptCG2046-RA
Protein status:BO07633.pep: validated full length
Sequenced Size:739

Clone Sequence Records

BO07633.3prime Sequence

737 bp (736 high quality bases) assembled on 2006-01-06

> BO07633.3prime
ATGGTCTAGAAAGCTTGCCATGTACAAATAAGAGCTCTCCTTCCGCGGAG
GGATGTAGCTCGAGCTGCAGGCAACGCCCGCGGCTTTAAGTACCTTGATC
ACTGGCTGCGCAGCTGTGGCGTCGAGGGGCAGCTTGTCGGTGTAAATAAC
GAAAGAGGTAACAGGCAATTCCATCTGATCCCGCCAACTGGCAACGCCTG
CTGCAACTCCAGCGATAAAGTTGGGAGCCTCTAGTTCAGTGATATCCTTC
TGGTTGGCACCTATGCCGCGGACAACGGCAATGTGATCCCGGTAGAGCTG
GATGTCCTCGCTTTTGAACTCGACCTTTGGCTTAAGCGTCAGAGTGATCA
CTTTCTTGGCAAGCTTCACGTACGGCAGTAGGAGCTCCGCTACCTCGCCG
CTACTGGTCAGGTCCTCGTTGATTATGGCCAGCAACTGTTTGGACGAATG
ACTCCAGTGCAGGGTCGAGTTATTGGCAGGAATGGCGCACACACGCTTTG
CATCCTTTTCCAGCAGAGAAGAGGCGAAGTGAGTGACGTTGACGCCCTCA
ATGACCACCAGCATCTCGCTCTCCACAGGGGCAGCTTCCCCATCGCAATC
ATCATCAAACTTCAGCTGCAGCTTCTCCACCGGCTTAAGGTTCTCCAATT
CATCCTCGTCGCAGTCGTCCCAGAAGGCACGCGACGAGGGTATATTTAGT
TCTCCAAATCCTGGACAGCTCATGTCGACTGATAACT

BO07633.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:07:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG2046-PA 708 CG2046-RA 1..705 723..19 3525 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:15:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG2046-RA 893 CG2046-RA 96..800 723..19 3525 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5793641..5794068 195..622 2140 100 Plus
3R 32079331 3R 5793401..5793577 19..195 885 100 Plus
3R 32079331 3R 5794121..5794222 622..723 510 100 Plus
Blast to na_te.dros performed 2015-02-12 07:15:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsil\Loa 7779 Dsil\Loa DSV28T24 7779bp AKA(S39346) Derived from X60177 (Rel. 37, Last updated, Version 8). 1743..1806 487..426 116 68.8 Minus

BO07633.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:24:37 Download gff for BO07633.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2046-PA 1..708 16..723 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:09:08 Download gff for BO07633.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2046-PA 1..708 16..723 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:36:49 Download gff for BO07633.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2046-RA 88..810 8..731 98   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:25:05 Download gff for BO07633.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2046-RA 88..810 8..731 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:25:05 Download gff for BO07633.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 5793391..5793576 8..194 97 <- Plus
3R 5793641..5794068 195..622 100 <- Plus
3R 5794122..5794230 623..731 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:36:49 Download gff for BO07633.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1619113..1619298 8..194 97 <- Plus
arm_3R 1619363..1619790 195..622 100 <- Plus
arm_3R 1619844..1619952 623..731 97   Plus

BO07633.5prime Sequence

737 bp (736 high quality bases) assembled on 2006-01-06

> BO07633.5prime
GAAGTTATCAGTCGACATGAGCTGTCCAGGATTTGGAGAACTAAATATAC
CCTCGTCGCGTGCCTTCTGGGACGACTGCGACGAGGATGAATTGGAGAAC
CTTAAGCCGGTGGAGAAGCTGCAGCTGAAGTTTGATGATGATTGCGATGG
GGAAGCTGCCCCTGTGGAGAGCGAGATGCTGGTGGTCATTGAGGGCGTCA
ACGTCACTCACTTCGCCTCTTCTCTGCTGGAAAAGGATGCAAAGCGTGTG
TGCGCCATTCCTGCCAATAACTCGACCCTGCACTGGAGTCATTCGTCCAA
ACAGTTGCTGGCCATAATCAACGAGGACCTGACCAGTAGCGGCGAGGTAG
CGGAGCTCCTACTGCCGTACGTGAAGCTTGCCAAGAAAGTGATCACTCTG
ACGCTTAAGCCAAAGGTCGAGTTCAAAAGCGAGGACATCCAGCTCTACCG
GGATCACATTGCCGTTGTCCGCGGCATAGGTGCCAACCAGAAGGATATCA
CTGAACTAGAGGCTCCCAACTTTATCGCTGGAGTTGCAGCAGGCGTTGCC
AGTTGGCGGGATCAGATGGAATTGCCTGTTACCTCTTTCGTTATTTACAC
CGACAAGCTGCCCCTCGACGCCACAGCTGCGCAGCCAGTGATCAAGGTAC
TTAAAGCCGCGGGCGTTGCCTGCAGCTCGAGCTACATCCCTCCGCGGAAG
GAGAGCTCTTATTTGTACATGGCAAGCTTTCTAGACC

BO07633.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:07:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG2046-PA 708 CG2046-RA 1..705 17..721 3525 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:26:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG2046-RA 893 CG2046-RA 96..800 17..721 3525 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:26:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5793641..5794068 545..118 2140 100 Minus
3R 32079331 3R 5793401..5793577 721..545 885 100 Minus
3R 32079331 3R 5794121..5794222 118..17 510 100 Minus
Blast to na_te.dros performed 2015-02-13 16:26:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsil\Loa 7779 Dsil\Loa DSV28T24 7779bp AKA(S39346) Derived from X60177 (Rel. 37, Last updated, Version 8). 1743..1806 253..314 116 68.8 Plus

BO07633.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:24:38 Download gff for BO07633.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2046-PA 1..708 17..724 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:09:09 Download gff for BO07633.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2046-PA 1..708 17..724 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:12:12 Download gff for BO07633.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2046-RA 88..810 9..732 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 18:59:38 Download gff for BO07633.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2046-RA 88..810 9..732 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 18:59:38 Download gff for BO07633.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 5793391..5793576 546..732 97 <- Minus
3R 5793641..5794068 118..545 100 <- Minus
3R 5794122..5794230 9..117 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:12:12 Download gff for BO07633.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1619113..1619298 546..732 97 <- Minus
arm_3R 1619363..1619790 118..545 100 <- Minus
arm_3R 1619844..1619952 9..117 97   Minus

BO07633.complete Sequence

739 bp (739 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630869

> BO07633.complete
GAAGTTATCAGTCGACATGAGCTGTCCAGGATTTGGAGAACTAAATATAC
CCTCGTCGCGTGCCTTCTGGGACGACTGCGACGAGGATGAATTGGAGAAC
CTTAAGCCGGTGGAGAAGCTGCAGCTGAAGTTTGATGATGATTGCGATGG
GGAAGCTGCCCCTGTGGAGAGCGAGATGCTGGTGGTCATTGAGGGCGTCA
ACGTCACTCACTTCGCCTCTTCTCTGCTGGAAAAGGATGCAAAGCGTGTG
TGCGCCATTCCTGCCAATAACTCGACCCTGCACTGGAGTCATTCGTCCAA
ACAGTTGCTGGCCATAATCAACGAGGACCTGACCAGTAGCGGCGAGGTAG
CGGAGCTCCTACTGCCGTACGTGAAGCTTGCCAAGAAAGTGATCACTCTG
ACGCTTAAGCCAAAGGTCGAGTTCAAAAGCGAGGACATCCAGCTCTACCG
GGATCACATTGCCGTTGTCCGCGGCATAGGTGCCAACCAGAAGGATATCA
CTGAACTAGAGGCTCCCAACTTTATCGCTGGAGTTGCAGCAGGCGTTGCC
AGTTGGCGGGATCAGATGGAATTGCCTGTTACCTCTTTCGTTATTTACAC
CGACAAGCTGCCCCTCGACGCCACAGCTGCGCAGCCAGTGATCAAGGTAC
TTAAAGCCGCGGGCGTTGCCTGCAGCTCGAGCTACATCCCTCCGCGGAAG
GAGAGCTCTTATTTGTACATGGCAAGCTTTCTAGACCAT

BO07633.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:55:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG2046-RA 708 CG2046-PA 1..705 17..721 3525 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:55:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG2046-RA 893 CG2046-RA 96..800 17..721 3525 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:55:40
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 5793641..5794068 545..118 2140 100 Minus
3R 32079331 3R 5793401..5793577 721..545 885 100 Minus
3R 32079331 3R 5794121..5794222 118..17 510 100 Minus
Blast to na_te.dros performed 2014-11-27 14:55:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsil\Loa 7779 Dsil\Loa DSV28T24 7779bp AKA(S39346) Derived from X60177 (Rel. 37, Last updated, Version 8). 1743..1806 253..314 116 68.8 Plus

BO07633.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:53:40 Download gff for BO07633.complete
Subject Subject Range Query Range Percent Splice Strand
CG2046-RA 1..708 17..724 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:25:52 Download gff for BO07633.complete
Subject Subject Range Query Range Percent Splice Strand
CG2046-RA 102..824 9..732 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:34:51 Download gff for BO07633.complete
Subject Subject Range Query Range Percent Splice Strand
CG2046-RA 96..800 17..723 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:53:40 Download gff for BO07633.complete
Subject Subject Range Query Range Percent Splice Strand
CG2046-RA 102..824 9..732 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:56:00 Download gff for BO07633.complete
Subject Subject Range Query Range Percent Splice Strand
CG2046-RA 96..800 17..723 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:56:00 Download gff for BO07633.complete
Subject Subject Range Query Range Percent Splice Strand
3R 5793398..5793576 546..723 98 <- Minus
3R 5793641..5794068 118..545 100 <- Minus
3R 5794122..5794222 17..117 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:34:51 Download gff for BO07633.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 1619120..1619298 546..723 98 <- Minus
arm_3R 1619363..1619790 118..545 100 <- Minus
arm_3R 1619844..1619944 17..117 100   Minus

BO07633.pep Sequence

Translation from 16 to 739

> BO07633.pep
MSCPGFGELNIPSSRAFWDDCDEDELENLKPVEKLQLKFDDDCDGEAAPV
ESEMLVVIEGVNVTHFASSLLEKDAKRVCAIPANNSTLHWSHSSKQLLAI
INEDLTSSGEVAELLLPYVKLAKKVITLTLKPKVEFKSEDIQLYRDHIAV
VRGIGANQKDITELEAPNFIAGVAAGVASWRDQMELPVTSFVIYTDKLPL
DATAAQPVIKVLKAAGVACSSSYIPPRKESSYLYMASFLDH

BO07633.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:38:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG2046-PA 235 CG2046-PA 1..235 1..235 1202 100 Plus