Clone BO07645 Report

Search the DGRC for BO07645

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:76
Well:45
Vector:pDNR-Dual
Associated Gene/TranscriptCG3045-RA
Protein status:BO07645.pep: validated full length
Sequenced Size:1531

Clone Sequence Records

BO07645.3prime Sequence

937 bp (777 high quality bases) assembled on 2006-01-06

> BO07645.3prime
ATGGTCTAGAAAGCTTGCCTCTGTTTCCGTTTCATTCTTCACAATCAGTC
GTTGCTTTTTTACAAAATGCTCTATCCGGTTCTCCAAACTCTCACATCGT
TTGCGTTCTAAAAGAGGCTGATATTGACGCGGATTGACGGAATCTTGCAA
CAGGATTACCTGAGCCAGTACCTTCTCTTTTGGCTTAAAATTCTCTTCAA
ATAAGTTTTCCAATTGTTGCAGCACATTGCGTATCATGGTGCTCTTAACG
CTAAATTGCGTCCACTCACACTGGGTGTTTTCAATAAGCTTTTGTAGATT
TTCCTCATTGTAAATCCACGCTGTAAGATCACGCTCCAAGTGCTCCGGAG
CATTTAAGTCATTTGATTCGTCGGCGGCTGTATCCATGGCTTCTTCGTCT
GCATCACCGCTGCTTGGATGGTTTACACTTCTTGTTGTGTGGTCTCGAAA
GTCGCAACGAAACAGATTTAAGGGCAATCCAATTGCGGGGGTGTACTGAG
GCTTGCAGGGATTAGACTCCACATCAAGCAGGTCACTTATTACGCCCGGG
TTTTCCTTTTTTTGGCCAACAAGTAAAAGCACCGCCATTATGCAACGGAT
TTGGTGCCAAAGGAAGGCATTTGCTTGAATCTCCAGGTAGTACATGTCGT
AGCCTGAATTTGTATGATTTGTCTGATCACAAGCTTCCACCCTGGCAGAT
TGCAAGTTTCTCATGTAGTTGGTTACTCCGTTGTGCACGTCCATTTTGCA
GAAATTACGGAAGTCGGCGTGACGCACTAGGAGATCACAGGCTTTACGCA
TGGCAGCAATGTCCAGGTCACCCTTAGGAAAGTAGTAACGATAGGTGCGG
GAAACGCAATCAAATCGAGCGCTATAAACCGGACTGCGCAGTGGCATCCA
AGCCACGCACTGAATGTCTTGGGCAGCACTCGATTCA

BO07645.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:07:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG3045-PA 1500 CG3045-RA 599..1497 917..19 4495 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:34:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG3045-RA 1663 CG3045-RA 670..1589 937..19 4575 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:34:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22173007..22173570 93..656 2820 100 Plus
2R 25286936 2R 22173625..22173910 653..937 1380 99.7 Plus
2R 25286936 2R 22172877..22172951 19..93 375 100 Plus
Blast to na_te.dros performed on 2015-02-13 05:34:05 has no hits.

BO07645.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:25:01 Download gff for BO07645.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3045-PA 579..1500 16..936 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:09:44 Download gff for BO07645.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3045-PA 579..1500 16..936 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:04:23 Download gff for BO07645.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 671..1589 19..936 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:47:15 Download gff for BO07645.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 671..1589 19..936 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:47:15 Download gff for BO07645.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 22172877..22172950 19..92 100 <- Plus
2R 22173007..22173567 93..653 100 <- Plus
2R 22173626..22173909 654..936 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:04:23 Download gff for BO07645.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18061131..18061414 654..936 99   Plus
arm_2R 18060382..18060455 19..92 100 <- Plus
arm_2R 18060512..18061072 93..653 100 <- Plus

BO07645.5prime Sequence

958 bp (819 high quality bases) assembled on 2006-01-06

> BO07645.5prime
GAAGTTATCAGTCGACATGAGTGCAACAAATGACAAAAAAGTTGTGATAA
ATAAACGATTAAAAGGCTTAAGCCGAGAGGCACTTGAAAAACTGACTCAA
ACCGAGCTGATCGACAAGGTTATCCAACTGGAGGCCTATAACTTTCAGTT
GCGGAATCTGCTGCAGAAAAAGTTAAGCGAGAAAGATAAACATGATAAGG
AATACTCTGGATTAATTGGAAACGAAGCGGAGGGCAAAGTTAGCCAGGTG
GCCAAGACATCCAGCAAAGTGCAGAAGATACGTAAGTTCGATTGGAGCAG
TGCACACAAGCGTCATGTCTTGCTTAAGATTACCTACTTTGGTTGGGATT
ATCAAGGATTTGCCTGCCAGGAGGATTCCAATGATACTATCGAATCCAAC
TTGTTCCGCGCTCTAGCTCGTACCTGCCTCATCGAATCTCGCGCCACTTC
CAATTATCACCGCTGTGGACGCACAGACAAGGAGGTGAGCGCCTTCTGCC
AGGTTATCTCCATAGATCTGCGCAGCAAGCATCCGCCCGAATCCCAGCTG
GATCCCACAGCGCTTTCCTCCGAGATTGACTACTGTGGACTCCTGAATCG
AGTGCTGCCCAAGAACATTCAGTGCGTGGCTTGGATGCCACTGCGCAGTC
CGGTTTATAGCGCTCGATTTGATTGCGTTTCCCGCACCTATCGTTACTAC
TTTCCTAAGGGTGACCTGGACATTGCTGCCATGCGTAAAGCCTGTGATCT
CCTAGTGCGTCACGCCGACTTCCGTAATTTCTGCAAAATGGACGTGCACA
ACGGAGTAACCAACTACATGAGAAACTTGCAATCTGCCAGGGTGGAAGCT
TGTGATCAGACAAATCATACAAATTCAGGCTACGACATGTACTACCTGGA
GATTCAAGCAAATGCCTTCCTTTGGCACAAATCCCGTGCATAATGGCGGT
GCTTTTTA

BO07645.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:07:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG3045-PA 1500 CG3045-RA 1..912 17..928 4560 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:10:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG3045-RA 1663 CG3045-RA 93..1033 17..956 4650 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:10:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22173625..22174112 879..392 2440 100 Minus
2R 25286936 2R 22174316..22174599 300..17 1420 100 Minus
2R 25286936 2R 22174168..22174262 392..298 475 100 Minus
2R 25286936 2R 22173489..22173570 956..876 330 96.3 Minus
Blast to na_te.dros performed on 2015-02-12 00:10:17 has no hits.

BO07645.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:25:02 Download gff for BO07645.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3045-PA 1..941 17..957 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:09:45 Download gff for BO07645.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3045-PA 1..941 17..957 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:48:27 Download gff for BO07645.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 93..1033 17..957 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:54:19 Download gff for BO07645.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 93..1033 17..957 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:54:19 Download gff for BO07645.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 22174168..22174259 301..392 100 <- Minus
2R 22174316..22174599 17..300 100   Minus
2R 22173488..22173567 879..957 95 <- Minus
2R 22173626..22174111 393..878 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:48:27 Download gff for BO07645.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18060993..18061072 879..957 95 <- Minus
arm_2R 18061131..18061616 393..878 100 <- Minus
arm_2R 18061673..18061764 301..392 100 <- Minus
arm_2R 18061821..18062104 17..300 100   Minus

BO07645.complete Sequence

1531 bp (1531 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630873

> BO07645.complete
GAAGTTATCAGTCGACATGAGTGCAACAAATGACAAAAAAGTTGTGATAA
ATAAACGATTAAAAGGCTTAAGCCGAGAGGCACTTGAAAAACTGACTCAA
ACCGAGCTGATCGACAAGGTTATCCAACTGGAGGCCTATAACTTTCAGTT
GCGGAATCTGCTGCAGAAAAAGTTAAGCGAGAAAGATAAACATGATAAGG
AATACTCTGGATTAATTGGAAACGAAGCGGAGGGCAAAGTTAGCCAGGTG
GCCAAGACATCCAGCAAAGTGCAGAAGATACGTAAGTTCGATTGGAGCAG
TGCACACAAGCGTCATGTCTTGCTTAAGATTACCTACTTTGGTTGGGATT
ATCAAGGATTTGCCTGCCAGGAGGATTCCAATGATACTATCGAATCCAAC
TTGTTCCGCGCTCTAGCTCGTACCTGCCTCATCGAATCTCGCGCCACTTC
CAATTATCACCGCTGTGGACGCACAGACAAGGAGGTGAGCGCCTTCTGCC
AGGTTATCTCCATAGATCTGCGCAGCAAGCATCCGCCCGAATCCCAGCTG
GATCCCACAGCGCTTTCCTCCGAGATTGACTACTGTGGACTCCTGAATCG
AGTGCTGCCCAAGAACATTCAGTGCGTGGCTTGGATGCCACTGCGCAGTC
CGGTTTATAGCGCTCGATTTGATTGCGTTTCCCGCACCTATCGTTACTAC
TTTCCTAAGGGTGACCTGGACATTGCTGCCATGCGTAAAGCCTGTGATCT
CCTAGTGCGTCACGCCGACTTCCGTAATTTCTGCAAAATGGACGTGCACA
ACGGAGTAACCAACTACATGAGAAACTTGCAATCTGCCAGGGTGGAAGCT
TGTGATCAGACAAATCATACAAATTCAGGCTACGACATGTACTACCTGGA
GATTCAAGCAAATGCCTTCCTTTGGCACCAAATCCGTTGCATAATGGCGG
TGCTTTTACTTGTTGGCCAAAAAAAGGAAAACCCGGGCGTAATAAGTGAC
CTGCTTGATGTGGAGTCTAATCCCTGCAAGCCTCAGTACACCCCCGCAAT
TGGATTGCCCTTAAATCTGTTTCGTTGCGACTTTCGAGACCACACAACAA
GAAGTGTAAACCATCCAAGCAGCGGTGATGCAGACGAAGAAGCCATGGAT
ACAGCCGCCGACGAATCAAATGACTTAAATGCTCCGGAGCACTTGGAGCG
TGATCTTACAGCGTGGATTTACAATGAGGAAAATCTACAAAAGCTTATTG
AAAACACCCAGTGTGAGTGGACGCAATTTAGCGTTAAGAGCACCATGATA
CGCAATGTGCTGCAACAATTGGAAAACTTATTTGAAGAGAATTTTAAGCC
AAAAGAGAAGGTACTGGCTCAGGTAATCCTGTTGCAAGATTCCGTCAATC
CGCGTCAATATCAGCCTCTTTTAGAACGCAAACGATGTGAGAGTTTGGAG
AACCGGATAGAGCATTTTGTAAAAAAGCAACGACTGATTGTGAAGAATGA
AACGGAAACAGAGGCAAGCTTTCTAGACCAT

BO07645.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:37:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG3045-RA 1500 CG3045-PA 1..1497 17..1513 7485 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:37:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG3045-RA 1663 CG3045-RA 93..1589 17..1513 7485 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:37:22
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22173007..22173570 1439..876 2820 100 Minus
2R 25286936 2R 22173625..22174112 879..392 2440 100 Minus
2R 25286936 2R 22174316..22174599 300..17 1420 100 Minus
2R 25286936 2R 22174168..22174262 392..298 475 100 Minus
2R 25286936 2R 22172877..22172951 1513..1439 375 100 Minus
Blast to na_te.dros performed on 2014-11-27 23:37:23 has no hits.

BO07645.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:19:13 Download gff for BO07645.complete
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 1..1500 17..1516 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:41:55 Download gff for BO07645.complete
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 140..1636 17..1513 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:33:41 Download gff for BO07645.complete
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 93..1589 17..1515 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:19:13 Download gff for BO07645.complete
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 140..1636 17..1513 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:04:45 Download gff for BO07645.complete
Subject Subject Range Query Range Percent Splice Strand
CG3045-RA 93..1589 17..1515 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:04:45 Download gff for BO07645.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22174316..22174599 17..300 100   Minus
2R 22172874..22172950 1440..1515 97 <- Minus
2R 22173007..22173567 879..1439 100 <- Minus
2R 22173626..22174111 393..878 100 <- Minus
2R 22174168..22174259 301..392 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:33:41 Download gff for BO07645.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18060379..18060455 1440..1515 97 <- Minus
arm_2R 18060512..18061072 879..1439 100 <- Minus
arm_2R 18061131..18061616 393..878 100 <- Minus
arm_2R 18061673..18061764 301..392 100 <- Minus
arm_2R 18061821..18062104 17..300 100   Minus

BO07645.pep Sequence

Translation from 16 to 1531

> BO07645.pep
MSATNDKKVVINKRLKGLSREALEKLTQTELIDKVIQLEAYNFQLRNLLQ
KKLSEKDKHDKEYSGLIGNEAEGKVSQVAKTSSKVQKIRKFDWSSAHKRH
VLLKITYFGWDYQGFACQEDSNDTIESNLFRALARTCLIESRATSNYHRC
GRTDKEVSAFCQVISIDLRSKHPPESQLDPTALSSEIDYCGLLNRVLPKN
IQCVAWMPLRSPVYSARFDCVSRTYRYYFPKGDLDIAAMRKACDLLVRHA
DFRNFCKMDVHNGVTNYMRNLQSARVEACDQTNHTNSGYDMYYLEIQANA
FLWHQIRCIMAVLLLVGQKKENPGVISDLLDVESNPCKPQYTPAIGLPLN
LFRCDFRDHTTRSVNHPSSGDADEEAMDTAADESNDLNAPEHLERDLTAW
IYNEENLQKLIENTQCEWTQFSVKSTMIRNVLQQLENLFEENFKPKEKVL
AQVILLQDSVNPRQYQPLLERKRCESLENRIEHFVKKQRLIVKNETETEA
SFLDH

BO07645.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:33:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG3045-PA 499 CG3045-PA 1..499 1..499 2623 100 Plus