Clone BO07651 Report

Search the DGRC for BO07651

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:76
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptHr96-RA
Protein status:BO07651.pep: full length peptide match
Sequenced Size:2203

Clone Sequence Records

BO07651.3prime Sequence

907 bp (776 high quality bases) assembled on 2006-01-06

> BO07651.3prime
ATGGTCTAGAAAGCTTGCGTGATTTTTCAAATCGAATATTTCACGCAGCA
AGGGCTCCACCTGGGATGGGTTAACATTCAAATAGACATTAATTATGAAC
TTGTTCAGACGCTCCACATCTGAAATCTTTTGGATTAGCTTGATAAACGC
GTTTCTCGCCTCACAGCCAGAATAAACACTCTCCAGATATCTTCGCAGAA
GATAATAGTAGGAATTCTGTTCCAATCTAATCACGTCTTTGTGTATCACT
CGCGATCGAGCCGAGGTAAAAAGGACAATGGCACACATGATCAGGATTAT
GTTCTCGTCCATGCGCCACTTCTCGTCAAACGTTGTGATGAACTTTTGGT
GCTCCTCGTAGATATTGCCTTCGGCAAACTTGAGCAGGTCAGTGCGTATG
TTGCCCATGTTCTCTTTGGTATGGGGTACCTTCCAGGCGGCGCGATCGTC
GTCGTAAATCATTACGGAGCGCATTATCATCATTTCTGTGCAGCCACCTT
TGAGTAGGGCCACCTGGTCCTCCTGGCACATGTCACGGAATGCTGTAATC
TTCTTGGCCATTTTGATAAGCCGCTTGATGGCCACCGCCGTCAGATTGAT
CAGCTGCAATAGCTTTGGGTTGTGGCGAGTGTCGTCGGGCTTAATGCGAT
CATCGCCCATCATCAGGGCGCTGAGGTCCTCGTCCACGGGATCATAAAGA
GCCTCGCTGGCCAGTCGCAGCTCCCGCAGCTTCATTTGCTCCGCCTCGTT
TAGCTCGCGATCCAACTGCTGGGTGGATGGGGCGCAGATGGGTTGCTGCA
GGTGCGGCTGGCTATTGTTTGCAGCCGAATTGCATCCACCGTACGTAGAC
TGAGTGCCGTAGGACATCTCCTCCTTTACGCGCGATGCCGCTTGTTGTAT
GCTATTG

BO07651.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:07:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG11783-PA 2172 Hr96-RA 1281..2169 907..19 4445 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:54:27
Subject Length Description Subject Range Query Range Score Percent Strand
Hr96-RA 2834 CG11783-RA 1590..2478 907..19 4445 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:54:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25026957..25027224 907..640 1340 100 Minus
3R 32079331 3R 25028246..25028461 641..426 1080 100 Minus
3R 32079331 3R 25028527..25028741 431..217 1075 100 Minus
3R 32079331 3R 25028796..25028995 218..19 1000 100 Minus
Blast to na_te.dros performed on 2015-02-11 03:54:23 has no hits.

BO07651.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:25:13 Download gff for BO07651.3prime
Subject Subject Range Query Range Percent Splice Strand
Hr96-PA 1281..2172 18..907 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:09:58 Download gff for BO07651.3prime
Subject Subject Range Query Range Percent Splice Strand
CG11783-PA 1281..2172 18..907 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:56:45 Download gff for BO07651.3prime
Subject Subject Range Query Range Percent Splice Strand
Hr96-RA 1590..2478 19..907 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:51:00 Download gff for BO07651.3prime
Subject Subject Range Query Range Percent Splice Strand
Hr96-RA 1590..2478 19..907 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:51:00 Download gff for BO07651.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 25026957..25027224 640..907 100 -> Minus
3R 25028248..25028457 430..639 100 -> Minus
3R 25028529..25028741 217..429 100 -> Minus
3R 25028798..25028994 20..216 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:56:45 Download gff for BO07651.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20852679..20852946 640..907 100 -> Minus
arm_3R 20853970..20854179 430..639 100 -> Minus
arm_3R 20854251..20854463 217..429 100 -> Minus
arm_3R 20854520..20854716 20..216 100 -> Minus

BO07651.5prime Sequence

788 bp (776 high quality bases) assembled on 2006-01-06

> BO07651.5prime
GAAGTTATCAGTCGACATGTCGCCGCCGAAGAACTGCGCGGTGTGCGGGG
ACAAGGCTCTGGGCTACAACTTCAATGCGGTCACCTGCGAGAGCTGCAAG
GCGTTCTTCCGACGGAACGCGCTGGCCAAGAAGCAGTTCACCTGCCCCTT
CAACCAAAACTGCGACATCACTGTGGTCACTCGACGCTTCTGCCAGAAAT
GCCGCCTGCGCAAGTGCCTGGATATCGGGATGAAGAGTGAAAACATTATG
TCCGAGGAGGACAAGCTGATCAAGCGGCGCAAGATCGAGACCAACCGGGC
CAAGCGACGCCTCATGGAGAACGGCACGGATGCGTGCGACGCCGATGGCG
GCGAGGAAAGGGATCACAAAGCGCCGGCGGATAGCAGCAGCAGCAACCTT
GACCACTACTCGGGGTCACAGGACTCGCAGAGCTGCGGCTCGGCGGACAG
CGGGGCCAATGGGTGCTCCGGCAGACAGGCCAGTTCGCCGGGCACACAGG
TCAATCCGCTTCAGATGACGGCCGAGAAGATAGTCGACCAGATCGTATCC
GACCCGGATCGAGCCTCGCAGGCCATCAACCGGTTGATGCGCACGCAGAA
AGAGGCTATATCGGTGATGGAGAAGGTAATCAGCTCACAAAAGGACGCCT
TAAGGCTGGTGTCGCATTTGATCGACTATCCAGGCGACGCACTCAAGATC
ATTTCAAAGTTTATGAACTCGCCCTTTAACGCGCTGACAGTATTCACCAA
ATTCATGAGCTCACCCACGGACGGCGTTGAAATTATCT

BO07651.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:07:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG11783-PA 2172 Hr96-RA 1..772 17..788 3860 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:11:32
Subject Length Description Subject Range Query Range Score Percent Strand
Hr96-RA 2834 CG11783-RA 304..1081 11..788 3875 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:11:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25025538..25026211 11..684 3355 99.9 Plus
3R 32079331 3R 25026276..25026335 681..740 300 100 Plus
3R 32079331 3R 25026398..25026448 738..788 255 100 Plus
Blast to na_te.dros performed 2015-02-12 00:11:28
Subject Length Description Subject Range Query Range Score Percent Strand
jockey 5020 jockey DMLINEJA 5020bp Derived from M22874 (g157823) (Rel. 47, Last updated, Version 5). 3180..3226 628..674 109 70.2 Plus

BO07651.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:25:14 Download gff for BO07651.5prime
Subject Subject Range Query Range Percent Splice Strand
Hr96-PA 1..772 17..788 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:10:00 Download gff for BO07651.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11783-PA 1..772 17..788 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:48:33 Download gff for BO07651.5prime
Subject Subject Range Query Range Percent Splice Strand
Hr96-RA 304..1081 11..788 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:54:33 Download gff for BO07651.5prime
Subject Subject Range Query Range Percent Splice Strand
Hr96-RA 304..1081 11..788 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:54:33 Download gff for BO07651.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 25025538..25026210 11..683 99 -> Plus
3R 25026279..25026335 684..740 100 -> Plus
3R 25026401..25026448 741..788 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:48:33 Download gff for BO07651.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20851260..20851932 11..683 99 -> Plus
arm_3R 20852001..20852057 684..740 100 -> Plus
arm_3R 20852123..20852170 741..788 100   Plus

BO07651.complete Sequence

2203 bp (2203 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ630875

> BO07651.complete
GAAGTTATCAGTCGACATGTCGCCGCCGAAGAACTGCGCGGTGTGCGGGG
ACAAGGCTCTGGGCTACAACTTCAATGCGGTCACCTGCGAGAGCTGCAAG
GCGTTCTTCCGACGGAACGCGCTGGCCAAGAAGCAGTTCACCTGCCCCTT
CAACCAAAACTGCGACATCACTGTGGTCACTCGACGCTTCTGCCAGAAAT
GCCGCCTGCGCAAGTGCCTGGATATCGGGATGAAGAGTGAAAACATTATG
TCCGAGGAGGACAAGCTGATCAAGCGGCGCAAGATCGAGACCAACCGGGC
CAAGCGACGCCTCATGGAGAACGGCACGGATGCGTGCGACGCCGATGGCG
GCGAGGAAAGGGATCACAAAGCGCCGGCGGATAGCAGCAGCAGCAACCTT
GACCACTACTCGGGGTCACAGGACTCGCAGAGCTGCGGCTCGGCGGACAG
CGGGGCCAATGGGTGCTCCGGCAGACAGGCCAGTTCGCCGGGCACACAGG
TCAATCCGCTTCAGATGACGGCCGAGAAGATAGTCGACCAGATCGTATCC
GACCCGGATCGAGCCTCGCAGGCCATCAACCGGTTGATGCGCACGCAGAA
AGAGGCTATATCGGTGATGGAGAAGGTAATCAGCTCACAAAAGGACGCCT
TAAGGCTGGTGTCGCATTTGATCGACTATCCAGGCGACGCACTCAAGATC
ATTTCAAAGTTTATGAACTCGCCCTTTAACGCGCTGACAGTATTCACCAA
ATTCATGAGCTCACCCACGGACGGCGTTGAAATTATCTCAAAGATAGTTG
ATTCGCCCGCGGACGTGGTGGAGTTCATGCAGAACTTGATGCACTCGCCA
GAGGACGCCATCGATATAATGAACAAGTTCATGAATACCCCAGCGGAGGC
GCTGCGCATTCTTAACCGAATCCTAAGCGGCGGAGGAGCGAACGCAGCCC
AGCAGACAGCAGACCGCAAGCCATTGCTGGACAAGGAGCCGGCGGTGAAG
CCTGCAGCGCCAGCGGAGCGAGCTGATACTGTCATTCAAAGCATGCTGGG
CAACAGTCCGCCAATTTCGCCACATGATGCTGCCGTGGATCTGCAGTACC
ACTCGCCCGGTGTCGGGGAGCAGCCCAGTACATCGAGTAGCCACCCCTTG
CCTTACATAGCCAACTCGCCGGACTTCGATCTGAAGACCTTCATGCAGAC
CAACTACAACGACGAGCCCAGTCTGGACAGTGATTTTAGCATTAACTCAA
TCGAATCGGTGCTATCCGAGGTGATCCGCATTGAGTACCAGGCCTTCAAT
AGCATACAACAAGCGGCATCGCGCGTAAAGGAGGAGATGTCCTACGGCAC
TCAGTCTACGTACGGTGGATGCAATTCGGCTGCAAACAATAGCCAGCCGC
ACCTGCAGCAACCCATCTGCGCCCCATCCACCCAGCAGTTGGATCGCGAG
CTAAACGAGGCGGAGCAAATGAAGCTGCGGGAGCTGCGACTGGCCAGCGA
GGCTCTTTATGATCCCGTGGACGAGGACCTCAGCGCCCTGATGATGGGCG
ATGATCGCATTAAGCCCGACGACACTCGCCACAACCCAAAGCTATTGCAG
CTGATCAATCTGACGGCGGTGGCCATCAAGCGGCTTATCAAAATGGCCAA
GAAGATTACAGCATTCCGTGACATGTGCCAGGAGGACCAGGTGGCCCTAC
TCAAAGGTGGCTGCACAGAAATGATGATAATGCGCTCCGTAATGATTTAC
GACGACGATCGCGCCGCCTGGAAGGTACCCCATACCAAAGAGAACATGGG
CAACATACGCACTGACCTGCTCAAGTTTGCCGAAGGCAATATCTACGAGG
AGCACCAAAAGTTCATCACAACGTTTGACGAGAAGTGGCGCATGGACGAG
AACATAATCCTGATCATGTGTGCCATTGTCCTTTTTACCTCGGCTCGATC
GCGAGTGATACACAAAGACGTGATTAGATTGGAACAGAATTCCTACTATT
ATCTTCTGCGAAGATATCTGGAGAGTGTTTATTCTGGCTGTGAGGCGAGA
AACGCGTTTATCAAGCTAATCCAAAAGATTTCAGATGTGGAGCGTCTGAA
CAAGTTCATAATTAATGTCTATTTGAATGTTAACCCATCCCAGGTGGAGC
CCTTGCTGCGTGAAATATTCGATTTGAAAAATCACGCAAGCTTTCTAGAC
CAT

BO07651.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:13:35
Subject Length Description Subject Range Query Range Score Percent Strand
Hr96-RA 2172 CG11783-PA 1..2169 17..2185 10845 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:13:36
Subject Length Description Subject Range Query Range Score Percent Strand
Hr96-RA 2834 CG11783-RA 304..2478 11..2185 10860 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:13:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25026398..25027224 738..1564 4135 100 Plus
3R 32079331 3R 25025538..25026211 11..684 3355 99.9 Plus
3R 32079331 3R 25028246..25028461 1563..1778 1080 100 Plus
3R 32079331 3R 25028527..25028741 1773..1987 1075 100 Plus
3R 32079331 3R 25028796..25028995 1986..2185 1000 100 Plus
3R 32079331 3R 25026276..25026335 681..740 300 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:13:34 has no hits.

BO07651.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:02:35 Download gff for BO07651.complete
Subject Subject Range Query Range Percent Splice Strand
Hr96-RA 1..2172 17..2186 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:21:24 Download gff for BO07651.complete
Subject Subject Range Query Range Percent Splice Strand
Hr96-RA 300..2474 11..2185 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:49:55 Download gff for BO07651.complete
Subject Subject Range Query Range Percent Splice Strand
Hr96-RA 310..2478 17..2187 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:02:35 Download gff for BO07651.complete
Subject Subject Range Query Range Percent Splice Strand
Hr96-RA 300..2474 11..2185 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:09:00 Download gff for BO07651.complete
Subject Subject Range Query Range Percent Splice Strand
Hr96-RA 310..2478 17..2187 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:09:00 Download gff for BO07651.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25028529..25028741 1775..1987 100 -> Plus
3R 25025544..25026210 17..683 100 -> Plus
3R 25026279..25026335 684..740 100 -> Plus
3R 25026401..25027224 741..1564 100 -> Plus
3R 25028248..25028457 1565..1774 100 -> Plus
3R 25028798..25028995 1988..2187 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:49:55 Download gff for BO07651.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20852001..20852057 684..740 100 -> Plus
arm_3R 20851266..20851932 17..683 100 -> Plus
arm_3R 20852123..20852946 741..1564 100 -> Plus
arm_3R 20853970..20854179 1565..1774 100 -> Plus
arm_3R 20854251..20854463 1775..1987 100 -> Plus
arm_3R 20854520..20854717 1988..2187 99   Plus

BO07651.pep Sequence

Translation from 16 to 2203

> BO07651.pep
MSPPKNCAVCGDKALGYNFNAVTCESCKAFFRRNALAKKQFTCPFNQNCD
ITVVTRRFCQKCRLRKCLDIGMKSENIMSEEDKLIKRRKIETNRAKRRLM
ENGTDACDADGGEERDHKAPADSSSSNLDHYSGSQDSQSCGSADSGANGC
SGRQASSPGTQVNPLQMTAEKIVDQIVSDPDRASQAINRLMRTQKEAISV
MEKVISSQKDALRLVSHLIDYPGDALKIISKFMNSPFNALTVFTKFMSSP
TDGVEIISKIVDSPADVVEFMQNLMHSPEDAIDIMNKFMNTPAEALRILN
RILSGGGANAAQQTADRKPLLDKEPAVKPAAPAERADTVIQSMLGNSPPI
SPHDAAVDLQYHSPGVGEQPSTSSSHPLPYIANSPDFDLKTFMQTNYNDE
PSLDSDFSINSIESVLSEVIRIEYQAFNSIQQAASRVKEEMSYGTQSTYG
GCNSAANNSQPHLQQPICAPSTQQLDRELNEAEQMKLRELRLASEALYDP
VDEDLSALMMGDDRIKPDDTRHNPKLLQLINLTAVAIKRLIKMAKKITAF
RDMCQEDQVALLKGGCTEMMIMRSVMIYDDDRAAWKVPHTKENMGNIRTD
LLKFAEGNIYEEHQKFITTFDEKWRMDENIILIMCAIVLFTSARSRVIHK
DVIRLEQNSYYYLLRRYLESVYSGCEARNAFIKLIQKISDVERLNKFIIN
VYLNVNPSQVEPLLREIFDLKNHASFLDH

BO07651.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:35:56
Subject Length Description Subject Range Query Range Score Percent Strand
Hr96-PA 723 CG11783-PA 1..723 1..723 3728 100 Plus
EcR-PC 669 CG1765-PC 55..165 7..112 245 39.6 Plus
EcR-PE 849 CG1765-PE 235..345 7..112 245 39.6 Plus
EcR-PD 849 CG1765-PD 235..345 7..112 245 39.6 Plus
EcR-PA 849 CG1765-PA 235..345 7..112 245 39.6 Plus