Clone Sequence Records
BO07654.3prime Sequence
855 bp (762 high quality bases) assembled on 2006-01-06
> BO07654.3prime
ATGGTCTAGAAAGCTTGCGGCTTCCTTCCTGCAACGTCCTGCCATGAGCT
TGAGTCCTTCTGCACACTTGGGATCCAGGTTGAAGAGACTGCGCTGATTT
ACCGACTCTGGACTTGCTTCCTCAGCATCCGACTTGGGATCTCGGTTGGC
TCCAGGCGCTGTGCTCAATTCTGGTGACAGAAAATCATGGGTGTTGAAGA
GGTCGTTGATGTTTTGGTCAACATTGTCAGAAGATTGAGCTCGCCCTGGA
ATAGGTTGGATCACAGAAGACTGCGGATGCCCGGGAATCGGTTGAATTGT
CTGCGCTCCGCCAGATCCCGCAGTTTCGTAATCCTGGCCGGGTCGAGGCT
GCAAAGTCTTGGGGGACTGGAAATTGAAGTCGGAAAAGTCTTCATCTGCG
CTTCCGGGACGCGGTTGTATGGAATTATTAGAAGTACCAGGTTTCCGTCC
CTGGTTTAGACCTGGTTGTTGAAACTCTCCAGAATTCTGGTCTGGTTGTT
GGAATCCTCCAGAACTCTGGTCTGGCTGCCGGAATCCTCCAGTACTCTGG
CCTGGCTGTTGGAATCCTCCAGTACTCTGGCCTGGCTGTTGGAATCCCCC
AGTACTCTGGCCTGGCTGTTGGAATCCCCCAGAACTCTGGCCTGGTTGCT
GGAATCCTCCAGTACTCTGGCCTGGCTGTTGGAATCCTCCAGAATTTTGG
CTTGGTTGCCGGAACCCCCCATTATTTTGGCCTGACTGTTGGAATCCGCC
AGCATTTTCATTTGGCTGTTCGAATCCACCAGGGTTTTGGCCAGGTCGAG
GCTGTAGGGTATTTGGATCACCACCCGGCTGCTGGGGTTTCAATCCTCGA
AGGTA
BO07654.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:07:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11395-PA | 1371 | CG11395-RA | 537..1368 | 850..19 | 4135 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:55:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11395-RB | 2279 | CG11395-RB | 584..1420 | 855..19 | 4155 | 99.8 | Minus |
| CG11395-RA | 1515 | CG11395-RA | 584..1420 | 855..19 | 4155 | 99.8 | Minus |
| CG11395-RB | 2279 | CG11395-RB | 657..947 | 752..462 | 765 | 84.2 | Minus |
| CG11395-RB | 2279 | CG11395-RB | 687..977 | 782..492 | 765 | 84.2 | Minus |
| CG11395-RA | 1515 | CG11395-RA | 657..947 | 752..462 | 765 | 84.2 | Minus |
| CG11395-RA | 1515 | CG11395-RA | 687..977 | 782..492 | 765 | 84.2 | Minus |
| CG11395-RB | 2279 | CG11395-RB | 681..902 | 698..477 | 705 | 87.8 | Minus |
| CG11395-RB | 2279 | CG11395-RB | 741..962 | 758..537 | 705 | 87.8 | Minus |
| CG11395-RA | 1515 | CG11395-RA | 681..902 | 698..477 | 705 | 87.8 | Minus |
| CG11395-RA | 1515 | CG11395-RA | 741..962 | 758..537 | 705 | 87.8 | Minus |
| CG11395-RB | 2279 | CG11395-RB | 648..888 | 701..461 | 530 | 81.3 | Minus |
| CG11395-RB | 2279 | CG11395-RB | 738..978 | 791..551 | 530 | 81.3 | Minus |
| CG11395-RA | 1515 | CG11395-RA | 648..888 | 701..461 | 530 | 81.3 | Minus |
| CG11395-RA | 1515 | CG11395-RA | 738..978 | 791..551 | 530 | 81.3 | Minus |
| CG11395-RB | 2279 | CG11395-RB | 687..858 | 632..461 | 470 | 84.9 | Minus |
| CG11395-RB | 2279 | CG11395-RB | 807..978 | 752..581 | 470 | 84.9 | Minus |
| CG11395-RA | 1515 | CG11395-RA | 687..858 | 632..461 | 470 | 84.9 | Minus |
| CG11395-RA | 1515 | CG11395-RA | 807..978 | 752..581 | 470 | 84.9 | Minus |
| CG11395-RB | 2279 | CG11395-RB | 657..828 | 632..461 | 335 | 79.7 | Minus |
| CG11395-RB | 2279 | CG11395-RB | 807..978 | 782..611 | 335 | 79.7 | Minus |
| CG11395-RA | 1515 | CG11395-RA | 657..828 | 632..461 | 335 | 79.7 | Minus |
| CG11395-RA | 1515 | CG11395-RA | 807..978 | 782..611 | 335 | 79.7 | Minus |
| CG11395-RB | 2279 | CG11395-RB | 657..798 | 602..461 | 275 | 79.6 | Minus |
| CG11395-RB | 2279 | CG11395-RB | 837..978 | 782..641 | 275 | 79.6 | Minus |
| CG11395-RA | 1515 | CG11395-RA | 657..798 | 602..461 | 275 | 79.6 | Minus |
| CG11395-RA | 1515 | CG11395-RA | 837..978 | 782..641 | 275 | 79.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:55:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17137900..17138736 | 855..19 | 4155 | 99.8 | Minus |
| 2R | 25286936 | 2R | 17137973..17138263 | 752..462 | 765 | 84.2 | Minus |
| 2R | 25286936 | 2R | 17138003..17138293 | 782..492 | 765 | 84.2 | Minus |
| 2R | 25286936 | 2R | 17137997..17138218 | 698..477 | 705 | 87.8 | Minus |
| 2R | 25286936 | 2R | 17138057..17138278 | 758..537 | 705 | 87.8 | Minus |
| 2R | 25286936 | 2R | 17137964..17138204 | 701..461 | 530 | 81.3 | Minus |
| 2R | 25286936 | 2R | 17138054..17138294 | 791..551 | 530 | 81.3 | Minus |
| 2R | 25286936 | 2R | 17138003..17138174 | 632..461 | 470 | 84.9 | Minus |
| 2R | 25286936 | 2R | 17138123..17138294 | 752..581 | 470 | 84.9 | Minus |
| 2R | 25286936 | 2R | 17137973..17138144 | 632..461 | 335 | 79.7 | Minus |
| 2R | 25286936 | 2R | 17138123..17138294 | 782..611 | 335 | 79.7 | Minus |
| 2R | 25286936 | 2R | 17137973..17138114 | 602..461 | 275 | 79.6 | Minus |
| 2R | 25286936 | 2R | 17138153..17138294 | 782..641 | 275 | 79.6 | Minus |
Blast to na_te.dros performed on 2015-02-11 03:55:39 has no hits.
BO07654.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:25:19 Download gff for
BO07654.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11395-PA | 533..1371 | 18..854 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:10:07 Download gff for
BO07654.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11395-PA | 533..1371 | 18..854 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:56:48 Download gff for
BO07654.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11395-RA | 585..1420 | 19..854 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:52:42 Download gff for
BO07654.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11395-RA | 585..1420 | 19..854 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:52:42 Download gff for
BO07654.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17137901..17138736 | 19..854 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:56:48 Download gff for
BO07654.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13025406..13026241 | 19..854 | 99 | | Minus |
BO07654.5prime Sequence
745 bp (744 high quality bases) assembled on 2006-01-06
> BO07654.5prime
GAAGTTATCAGTCGACATGTTTTTGCAACTCTTATCTATAAGGTTGGCTA
TGTCACTGATCCTTTTAATCAGTGGACAATGGACTTCAGCTCGTCCCCAG
AATCCTTACTACGTGGAAAACGGCGGACATGGATATCCGAACCATCATCG
CCACCATGGTCATCACGTACATGGGTCAGGATATGGCCCAGGATCCATTG
GACCACCTCCCTTTGTCTTCGGTCGTTTTCCACCGCCTCCTTCGTATTAT
CCAGATAATCAACCATCAGGAGGTCGTCAACCGTATTATCCGAACGTCGG
TGCAGTTCAAGGACAACCTGGCAGTCAATTTCACCAACATGGAGGTGGTT
TTCATAGAGGACAACAGGAATATCCCTACCCTGTAGGTGATTTTAACAGG
GGACATCCAGGCCTCCAGCAACCGGGTGGAGATTTCAACAGGGGCCAACC
AGGTTTTCAGCAGCCAGGAAATGAATTCAATAGACCACAACCATCTGGAA
GGGCGCCAGGACATCAACAATCTGGCAGCCATGAGGAGCTACCCACCTAC
CCTCGAGGATTGGAACCCCAGCAGCCGGGTGGTGATCCAAATACCCTACA
GCCTCGACCTGGCCAAAACCCTGGTGGATTCGAACAGCCAAATGAAAATG
CTGGCGGATTCCAACAGTCAGGCCAAAATAATGGGGGGTTCCGGCAACCA
AGCCAAAATTCTGGAGGATTCCAACAGCCAGGCCAGAGTACTGGA
BO07654.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:07:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11395-PA | 1371 | CG11395-RA | 1..729 | 17..745 | 3645 | 100 | Plus |
| CG11395-PA | 1371 | CG11395-RA | 815..849 | 711..745 | 175 | 100 | Plus |
| CG11395-PA | 1371 | CG11395-RA | 753..788 | 709..744 | 155 | 97.2 | Plus |
| CG11395-PA | 1371 | CG11395-RA | 790..819 | 716..745 | 150 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:40:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11395-RB | 2279 | CG11395-RB | 53..781 | 17..745 | 3645 | 100 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 53..781 | 17..745 | 3645 | 100 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 741..840 | 645..744 | 305 | 87 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 741..840 | 645..744 | 305 | 87 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 807..901 | 651..745 | 280 | 86.3 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 807..901 | 651..745 | 280 | 86.3 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 837..961 | 621..745 | 250 | 80 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 738..871 | 612..745 | 250 | 79.1 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 738..871 | 612..745 | 250 | 79.1 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 837..961 | 621..745 | 250 | 80 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 807..931 | 621..745 | 220 | 78.4 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 807..931 | 621..745 | 220 | 78.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:40:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17137491..17138097 | 139..745 | 3035 | 100 | Plus |
| 2R | 25286936 | 2R | 17137292..17137414 | 17..139 | 615 | 100 | Plus |
| 2R | 25286936 | 2R | 17138057..17138156 | 645..744 | 305 | 87 | Plus |
| 2R | 25286936 | 2R | 17138123..17138217 | 651..745 | 280 | 86.3 | Plus |
| 2R | 25286936 | 2R | 17138054..17138187 | 612..745 | 250 | 79.1 | Plus |
| 2R | 25286936 | 2R | 17138153..17138277 | 621..745 | 250 | 80 | Plus |
| 2R | 25286936 | 2R | 17138123..17138247 | 621..745 | 220 | 78.4 | Plus |
Blast to na_te.dros performed on 2015-02-09 19:40:46 has no hits.
BO07654.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:25:20 Download gff for
BO07654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11395-PA | 1..728 | 17..744 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:10:08 Download gff for
BO07654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11395-PA | 1..728 | 17..744 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:10:05 Download gff for
BO07654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11395-RA | 40..780 | 5..744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:21:00 Download gff for
BO07654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11395-RA | 40..780 | 5..744 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:21:00 Download gff for
BO07654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17137279..17137413 | 5..138 | 96 | -> | Plus |
| 2R | 17137491..17138096 | 139..744 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:10:05 Download gff for
BO07654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13024784..13024918 | 5..138 | 96 | -> | Plus |
| arm_2R | 13024996..13025601 | 139..744 | 100 | | Plus |
BO07654.complete Sequence
1402 bp (1402 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630877
> BO07654.complete
GAAGTTATCAGTCGACATGTTTTTGCAACTCTTATCTATAAGGTTGGCTA
TGTCACTGATCCTTTTAATCAGTGGACAATGGACTTCAGCTCGTCCCCAG
AATCCTTACTACGTGGAAAACGGCGGACATGGATATCCGAACCATCATCG
CCACCATGGTCATCACGTACATGGGTCAGGATATGGCCCAGGATCCATTG
GACCACCTCCCTTTGTCTTCGGTCGTTTTCCACCGCCTCCTTCGTATTAT
CCAGATAATCAACCATCAGGAGGTCGTCAACCGTATTATCCGAACGTCGG
TGCAGTTCAAGGACAACCTGGCAGTCAATTTCACCAACATGGAGGTGGTT
TTCATAGAGGACAACAGGAATATCCCTACCCTGTAGGTGATTTTAACAGG
GGACATCCAGGCCTCCAGCAACCGGGTGGAGATTTCAACAGGGGCCAACC
AGGTTTTCAGCAGCCAGGAAATGAATTCAATAGACCACAACCATCTGGAA
GGGCGCCAGGACATCAACAATCTGGCAGCCATGAGGAGCTACCCACCTAC
CCTCGAGGATTGGAACCCCAGCAGCCGGGTGGTGATCCAAATACCCTACA
GCCTCGACCTGGCCAAAACCCTGGTGGATTCGAACAGCCAAATGAAAATG
CTGGCGGATTCCAACAGTCAGGCCAAAATAATGGGGGGTTCCGGCAACCA
AGCCAAAATTCTGGAGGATTCCAACAGCCAGGCCAGAGTACTGGAGGATT
CCAGCAACCAGGCCAGAGTTCTGGGGGATTCCAACAGCCAGGCCAGAGTA
CTGGGGGATTCCAACAGCCAGGCCAGAGTACTGGAGGATTCCAACAGCCA
GGCCAGAGTACTGGAGGATTCCGGCAGCCAGACCAGAGTTCTGGAGGATT
CCAACAACCAGACCAGAATTCTGGAGAGTTTCAACAACCAGGTCTAAACC
AGGGACGGAAACCTGGTACTTCTAATAATTCCATACAACCGCGTCCCGGA
AGCGCAGATGAAGACTTTTCCGACTTCAATTTCCAGTCCCCCAAGACTTT
GCAGCCTCGACCCGGCCAGGATTACGAAACTGCGGGATCTGGCGGAGCGC
AGACAATTCAACCGATTCCCGGGCATCCGCAGTCTTCTGTGATCCAACCT
ATTCCAGGGCGAGCTCAATCTTCTGACAATGTTGACCAAAACATCAACGA
CCTCTTCAACACCCATGATTTTCTGTCACCAGAATTGAGCACAGCGCCTG
GAGCCAACCGAGATCCCAAGTCGGATGCTGAGGAAGCAAGTCCAGAGTCG
GTAAATCAGCGCAGTCTCTTCAACCTGGATCCCAAGTGTGCAGAAGGACT
CAAGCTCATGGCAGGACGTTGCAGGAAGGAAGCCGCAAGCTTTCTAGACC
AT
BO07654.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:04:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11395-RB | 1371 | CG11395-PB | 1..1368 | 17..1384 | 6840 | 100 | Plus |
| CG11395-RA | 1371 | CG11395-PA | 1..1368 | 17..1384 | 6840 | 100 | Plus |
| CG11395-RB | 1371 | CG11395-PB | 605..895 | 651..941 | 765 | 84.2 | Plus |
| CG11395-RB | 1371 | CG11395-PB | 635..925 | 621..911 | 765 | 84.2 | Plus |
| CG11395-RA | 1371 | CG11395-PA | 605..895 | 651..941 | 765 | 84.2 | Plus |
| CG11395-RA | 1371 | CG11395-PA | 635..925 | 621..911 | 765 | 84.2 | Plus |
| CG11395-RB | 1371 | CG11395-PB | 629..850 | 705..926 | 705 | 87.8 | Plus |
| CG11395-RB | 1371 | CG11395-PB | 689..910 | 645..866 | 705 | 87.8 | Plus |
| CG11395-RA | 1371 | CG11395-PA | 629..850 | 705..926 | 705 | 87.8 | Plus |
| CG11395-RA | 1371 | CG11395-PA | 689..910 | 645..866 | 705 | 87.8 | Plus |
| CG11395-RB | 1371 | CG11395-PB | 596..836 | 702..942 | 530 | 81.3 | Plus |
| CG11395-RB | 1371 | CG11395-PB | 686..926 | 612..852 | 530 | 81.3 | Plus |
| CG11395-RA | 1371 | CG11395-PA | 596..836 | 702..942 | 530 | 81.3 | Plus |
| CG11395-RA | 1371 | CG11395-PA | 686..926 | 612..852 | 530 | 81.3 | Plus |
| CG11395-RB | 1371 | CG11395-PB | 635..806 | 771..942 | 470 | 84.9 | Plus |
| CG11395-RB | 1371 | CG11395-PB | 755..926 | 651..822 | 470 | 84.9 | Plus |
| CG11395-RA | 1371 | CG11395-PA | 635..806 | 771..942 | 470 | 84.9 | Plus |
| CG11395-RA | 1371 | CG11395-PA | 755..926 | 651..822 | 470 | 84.9 | Plus |
| CG11395-RB | 1371 | CG11395-PB | 605..776 | 771..942 | 335 | 79.7 | Plus |
| CG11395-RB | 1371 | CG11395-PB | 755..926 | 621..792 | 335 | 79.7 | Plus |
| CG11395-RA | 1371 | CG11395-PA | 605..776 | 771..942 | 335 | 79.7 | Plus |
| CG11395-RA | 1371 | CG11395-PA | 755..926 | 621..792 | 335 | 79.7 | Plus |
| CG11395-RB | 1371 | CG11395-PB | 785..926 | 621..762 | 275 | 79.6 | Plus |
| CG11395-RB | 1371 | CG11395-PB | 605..746 | 801..942 | 275 | 79.6 | Plus |
| CG11395-RA | 1371 | CG11395-PA | 605..746 | 801..942 | 275 | 79.6 | Plus |
| CG11395-RA | 1371 | CG11395-PA | 785..926 | 621..762 | 275 | 79.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:04:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11395-RB | 2279 | CG11395-RB | 53..1420 | 17..1384 | 6840 | 100 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 53..1420 | 17..1384 | 6840 | 100 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 657..947 | 651..941 | 765 | 84.2 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 687..977 | 621..911 | 765 | 84.2 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 657..947 | 651..941 | 765 | 84.2 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 687..977 | 621..911 | 765 | 84.2 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 681..902 | 705..926 | 705 | 87.8 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 741..962 | 645..866 | 705 | 87.8 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 681..902 | 705..926 | 705 | 87.8 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 741..962 | 645..866 | 705 | 87.8 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 648..888 | 702..942 | 530 | 81.3 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 738..978 | 612..852 | 530 | 81.3 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 648..888 | 702..942 | 530 | 81.3 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 738..978 | 612..852 | 530 | 81.3 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 687..858 | 771..942 | 470 | 84.9 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 807..978 | 651..822 | 470 | 84.9 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 687..858 | 771..942 | 470 | 84.9 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 807..978 | 651..822 | 470 | 84.9 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 807..978 | 621..792 | 335 | 79.7 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 657..828 | 771..942 | 335 | 79.7 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 657..828 | 771..942 | 335 | 79.7 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 807..978 | 621..792 | 335 | 79.7 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 657..798 | 801..942 | 275 | 79.6 | Plus |
| CG11395-RB | 2279 | CG11395-RB | 837..978 | 621..762 | 275 | 79.6 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 657..798 | 801..942 | 275 | 79.6 | Plus |
| CG11395-RA | 1515 | CG11395-RA | 837..978 | 621..762 | 275 | 79.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:04:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17137491..17138736 | 139..1384 | 6230 | 100 | Plus |
| 2R | 25286936 | 2R | 17137973..17138263 | 651..941 | 765 | 84.2 | Plus |
| 2R | 25286936 | 2R | 17138003..17138293 | 621..911 | 765 | 84.2 | Plus |
| 2R | 25286936 | 2R | 17137997..17138218 | 705..926 | 705 | 87.8 | Plus |
| 2R | 25286936 | 2R | 17138057..17138278 | 645..866 | 705 | 87.8 | Plus |
| 2R | 25286936 | 2R | 17137292..17137414 | 17..139 | 615 | 100 | Plus |
| 2R | 25286936 | 2R | 17137964..17138204 | 702..942 | 530 | 81.3 | Plus |
| 2R | 25286936 | 2R | 17138054..17138294 | 612..852 | 530 | 81.3 | Plus |
| 2R | 25286936 | 2R | 17138003..17138174 | 771..942 | 470 | 84.9 | Plus |
| 2R | 25286936 | 2R | 17138123..17138294 | 651..822 | 470 | 84.9 | Plus |
| 2R | 25286936 | 2R | 17137973..17138144 | 771..942 | 335 | 79.7 | Plus |
| 2R | 25286936 | 2R | 17138123..17138294 | 621..792 | 335 | 79.7 | Plus |
| 2R | 25286936 | 2R | 17137973..17138114 | 801..942 | 275 | 79.6 | Plus |
| 2R | 25286936 | 2R | 17138153..17138294 | 621..762 | 275 | 79.6 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:04:26 has no hits.
BO07654.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:15:23 Download gff for
BO07654.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11395-RA | 1..1371 | 17..1385 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:37:11 Download gff for
BO07654.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11395-RA | 39..1419 | 5..1384 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:04:12 Download gff for
BO07654.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11395-RA | 61..1420 | 25..1386 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:15:23 Download gff for
BO07654.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11395-RA | 39..1419 | 5..1384 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:02:17 Download gff for
BO07654.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11395-RA | 61..1420 | 25..1386 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:02:17 Download gff for
BO07654.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17137300..17137413 | 25..138 | 100 | -> | Plus |
| 2R | 17137491..17138736 | 139..1386 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:04:12 Download gff for
BO07654.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13024805..13024918 | 25..138 | 100 | -> | Plus |
| arm_2R | 13024996..13026241 | 139..1386 | 99 | | Plus |
BO07654.pep Sequence
Translation from 16 to 1402
> BO07654.pep
MFLQLLSIRLAMSLILLISGQWTSARPQNPYYVENGGHGYPNHHRHHGHH
VHGSGYGPGSIGPPPFVFGRFPPPPSYYPDNQPSGGRQPYYPNVGAVQGQ
PGSQFHQHGGGFHRGQQEYPYPVGDFNRGHPGLQQPGGDFNRGQPGFQQP
GNEFNRPQPSGRAPGHQQSGSHEELPTYPRGLEPQQPGGDPNTLQPRPGQ
NPGGFEQPNENAGGFQQSGQNNGGFRQPSQNSGGFQQPGQSTGGFQQPGQ
SSGGFQQPGQSTGGFQQPGQSTGGFQQPGQSTGGFRQPDQSSGGFQQPDQ
NSGEFQQPGLNQGRKPGTSNNSIQPRPGSADEDFSDFNFQSPKTLQPRPG
QDYETAGSGGAQTIQPIPGHPQSSVIQPIPGRAQSSDNVDQNINDLFNTH
DFLSPELSTAPGANRDPKSDAEEASPESVNQRSLFNLDPKCAEGLKLMAG
RCRKEAASFLDH
BO07654.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:47:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11395-PB | 456 | CG11395-PB | 1..456 | 1..456 | 2536 | 100 | Plus |
| CG11395-PA | 456 | CG11395-PA | 1..456 | 1..456 | 2536 | 100 | Plus |
| Tequila-PF | 2379 | CG4821-PF | 1023..1329 | 13..335 | 292 | 28.2 | Plus |
| Tequila-PG | 2792 | CG4821-PG | 1023..1329 | 13..335 | 292 | 28.2 | Plus |
| Tequila-PF | 2379 | CG4821-PF | 1005..1223 | 167..376 | 273 | 31.9 | Plus |
| Tequila-PG | 2792 | CG4821-PG | 1005..1223 | 167..376 | 273 | 31.9 | Plus |
| AGO2-PB | 1214 | CG7439-PB | 46..326 | 75..332 | 246 | 34.6 | Plus |
