Clone BO07664 Report

Search the DGRC for BO07664

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:76
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG9008-RA
Protein status:BO07664.pep: validated full length
Sequenced Size:925

Clone Sequence Records

BO07664.3prime Sequence

923 bp (817 high quality bases) assembled on 2006-01-06

> BO07664.3prime
ATGGTCTAGAAAGCTTGCGCGATTCCGCTTGGTCTTGCGACTCACATTGC
CCTCGATGATAATCTGAAGGATCTGGCTGGCCTCGAAAGCGGTGCCCGGC
AGCAGGATCACCGGCGATGTCACATTGCCCGCCTCCACGCACAACATGTT
GGGGAACTCGTCGTCCCCGAAGTCACTCATCTCACGCGATCGATCGATCC
AAGGATTCCAGATGACCGTATCGGGAAAATTGTACTTGTGCAGTCTCATC
TTCCTGCCGGACACCACGTTTGTGATGACGTGCTCCTGCGGCGTGTGCTG
GTAGATCCTGTCGGTCCACTCATTGACGGTGACCACCTCGCGTCCCTCCT
GATAGAGCGCATTCTCCCGCGTCTTGTCGATGAAGTGACAGCCCTGGAGG
CCGGTGATCTGACATCGGCGCACATCGGGCACCTTTAGGTAGGTGTGCAG
CAGCATGTTGAAGGTGAAGCTCAGCTCCTTGCTGGGATTGTAGACGCCGA
TGTGGAAGTGCAGCTCCTTTTCGCGCAGGATCAGCCTATAAGTGATGCGA
AACTGATAATTCCATATGGATCGCGTAAAATCGTTGTCCATCAGCGAAAA
TATGGCCTCCACATCGCCATTGTGAAGCCTGTCTGGCGGTCTCTCCAGGT
GCCACCTGGTAATCCTCGCAAATCCATGCTGCGGCCCAAAGGACCACGCA
CCGAACTGAGGGAAGACAAAGGGAATCCCACCGCGTATCGCCTTCTTGCC
ATCGAATGAGGCTAGTTTGCTGACAAACAACTGCTCCTGATTGTTTACCC
GCCAGGACACGACCGTCGCACCGTGCAAGTTGATGGTGCANGTTGTATTG
TTTCCGCGATCCAGAACAACTACACTCGTTGCGGCCATTGCGGGCGCTGT
CGTGGGCATGTCGACTGATAACT

BO07664.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:07:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG9008-PA 894 CG9008-RA 5..891 905..19 4391 99.7 Minus
CG9008-PB 576 CG9008-RB 1..573 591..19 2865 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:04:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG9008-RA 1987 CG9008-RA 434..1324 909..19 4414 99.7 Minus
CG9008-RE 2194 CG9008-RE 434..1279 909..64 4189 99.6 Minus
CG9008-RD 2125 CG9008-RD 434..1279 909..64 4189 99.6 Minus
CG9008-RE 2194 CG9008-RE 1483..1531 67..19 245 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:04:13
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13775471..13775808 216..553 1690 100 Plus
2L 23513712 2L 13775876..13776034 552..710 795 100 Plus
2L 23513712 2L 13775255..13775407 64..216 765 100 Plus
2L 23513712 2L 13779642..13779732 819..909 414 96.7 Plus
2L 23513712 2L 13776098..13776159 711..772 310 100 Plus
2L 23513712 2L 13777771..13777823 770..822 265 100 Plus
2L 23513712 2L 13775003..13775051 19..67 245 100 Plus
Blast to na_te.dros performed on 2015-02-12 10:04:14 has no hits.

BO07664.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:25:39 Download gff for BO07664.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9008-PA 1..894 18..909 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:10:35 Download gff for BO07664.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9008-PA 1..894 18..909 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:46:03 Download gff for BO07664.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 429..1331 10..914 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:02:19 Download gff for BO07664.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 429..1331 10..914 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:02:19 Download gff for BO07664.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 13779645..13779737 822..914 94   Plus
2L 13774995..13775047 10..63 92 <- Plus
2L 13775255..13775406 64..215 100 <- Plus
2L 13775471..13775808 216..553 100 <- Plus
2L 13775878..13776034 554..710 100 <- Plus
2L 13776098..13776156 711..769 100 <- Plus
2L 13777771..13777822 770..821 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:46:03 Download gff for BO07664.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13774995..13775047 10..63 92 <- Plus
arm_2L 13775255..13775406 64..215 100 <- Plus
arm_2L 13775471..13775808 216..553 100 <- Plus
arm_2L 13775878..13776034 554..710 100 <- Plus
arm_2L 13776098..13776156 711..769 100 <- Plus
arm_2L 13777771..13777822 770..821 100 <- Plus
arm_2L 13779645..13779737 822..914 94   Plus

BO07664.5prime Sequence

923 bp (761 high quality bases) assembled on 2006-01-06

> BO07664.5prime
GAAGTTATCAGTCGACATGGCCACGACAGCGGCCGCAATGGCCGCAACGA
GTGTAGTTGTTCTGGATCGCGGAAACAATACAACCTGCACCATCAACTTG
CACGGTGCGACGGTCGTGTCCTGGCGGGTAAACAATCAGGAGCAGTTGTT
TGTCAGCAAACTAGCCTCATTCGATGGCAAGAAGGCGATACGCGGTGGGA
TTCCCTTTGTCTTCCCTCAGTTCGGTGCGTGGTCCTTTGGGCCGCAGCAT
GGATTTGCGAGGATTACCAGGTGGCACCTGGAGAGACCGCCAGACAGGCT
TCACAATGGCGATGTGGAGGCCATATTTTCGCTGATGGACAACGATTTTA
CGCGATCCATATGGAATTATCAGTTTCGCATCACTTATAGGCTGATCCTG
CGCGAAAAGGAGCTGCACTTCCACATCGGCGTCTACAATCCCAGCAAGGA
GCTGAGCTTCACCTTCAACATGCTGCTGCACACCTACCTAAAGGTGCCCG
ATGTGCGCCGATGTCAGATCACCGGCCTCCAGGGCTGTCACTTCATCGAC
AAGACGCGGGAGAATGCGCTCTATCAGGAGGGACGCGAGGTGGTCACCGT
CAATGAGTGGACCGACAGGATCTACCAGCACACGCCGCAGGAGCACGTCA
TCACAAACGTGGTGTCCGGCAGGAAGATGAGACTGCACAAGTACAATTTT
CCCGATACGGTCATCTGGAATCCTTGGATCGATCGATCGCGTGAGATGAG
TGACTTCGGGGACGACGAGTTCCCCAACATGTTGTGCGTGGAGGCGGGCA
ATGTGACATCGCCGGTGATCCTGCTGCCGGGCACCGCTTTCGAGGCCAGC
CAGATCCTTCAGATTATCATCGAGGGCAATGTGAGTCGCAAGACCAAGCG
GAATCGCGCAAGCTTTCTAGACC

BO07664.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:07:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG9008-PA 894 CG9008-RA 1..891 17..907 4455 100 Plus
CG9008-PB 576 CG9008-RB 1..573 335..907 2865 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:04:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG9008-RA 1987 CG9008-RA 434..1324 17..907 4455 100 Plus
CG9008-RE 2194 CG9008-RE 434..1279 17..862 4230 100 Plus
CG9008-RD 2125 CG9008-RD 434..1279 17..862 4230 100 Plus
CG9008-RE 2194 CG9008-RE 1483..1531 859..907 245 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:04:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13775471..13775808 710..373 1690 100 Minus
2L 23513712 2L 13775876..13776034 374..216 795 100 Minus
2L 23513712 2L 13775255..13775407 862..710 765 100 Minus
2L 23513712 2L 13779642..13779732 107..17 455 100 Minus
2L 23513712 2L 13776098..13776159 215..154 310 100 Minus
2L 23513712 2L 13777771..13777823 156..104 265 100 Minus
2L 23513712 2L 13775003..13775051 907..859 245 100 Minus
Blast to na_te.dros performed on 2015-02-12 10:04:18 has no hits.

BO07664.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:25:40 Download gff for BO07664.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9008-PA 1..894 17..908 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:10:36 Download gff for BO07664.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9008-PA 1..894 17..908 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:46:04 Download gff for BO07664.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 429..1331 12..916 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:02:26 Download gff for BO07664.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 429..1331 12..916 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:02:26 Download gff for BO07664.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 13775255..13775406 711..862 100 <- Minus
2L 13775471..13775808 373..710 100 <- Minus
2L 13775878..13776034 216..372 100 <- Minus
2L 13776098..13776156 157..215 100 <- Minus
2L 13777771..13777822 105..156 100 <- Minus
2L 13779645..13779737 12..104 97   Minus
2L 13774995..13775047 863..916 92 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:46:04 Download gff for BO07664.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13774995..13775047 863..916 92 <- Minus
arm_2L 13775255..13775406 711..862 100 <- Minus
arm_2L 13775471..13775808 373..710 100 <- Minus
arm_2L 13775878..13776034 216..372 100 <- Minus
arm_2L 13776098..13776156 157..215 100 <- Minus
arm_2L 13777771..13777822 105..156 100 <- Minus
arm_2L 13779645..13779737 12..104 97   Minus

BO07664.complete Sequence

925 bp (925 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630885

> BO07664.complete
GAAGTTATCAGTCGACATGGCCACGACAGCGGCCGCAATGGCCGCAACGA
GTGTAGTTGTTCTGGATCGCGGAAACAATACAACCTGCACCATCAACTTG
CACGGTGCGACGGTCGTGTCCTGGCGGGTAAACAATCAGGAGCAGTTGTT
TGTCAGCAAACTAGCCTCATTCGATGGCAAGAAGGCGATACGCGGTGGGA
TTCCCTTTGTCTTCCCTCAGTTCGGTGCGTGGTCCTTTGGGCCGCAGCAT
GGATTTGCGAGGATTACCAGGTGGCACCTGGAGAGACCGCCAGACAGGCT
TCACAATGGCGATGTGGAGGCCATATTTTCGCTGATGGACAACGATTTTA
CGCGATCCATATGGAATTATCAGTTTCGCATCACTTATAGGCTGATCCTG
CGCGAAAAGGAGCTGCACTTCCACATCGGCGTCTACAATCCCAGCAAGGA
GCTGAGCTTCACCTTCAACATGCTGCTGCACACCTACCTAAAGGTGCCCG
ATGTGCGCCGATGTCAGATCACCGGCCTCCAGGGCTGTCACTTCATCGAC
AAGACGCGGGAGAATGCGCTCTATCAGGAGGGACGCGAGGTGGTCACCGT
CAATGAGTGGACCGACAGGATCTACCAGCACACGCCGCAGGAGCACGTCA
TCACAAACGTGGTGTCCGGCAGGAAGATGAGACTGCACAAGTACAATTTT
CCCGATACGGTCATCTGGAATCCTTGGATCGATCGATCGCGTGAGATGAG
TGACTTCGGGGACGACGAGTTCCCCAACATGTTGTGCGTGGAGGCGGGCA
ATGTGACATCGCCGGTGATCCTGCTGCCGGGCACCGCTTTCGAGGCCAGC
CAGATCCTTCAGATTATCATCGAGGGCAATGTGAGTCGCAAGACCAAGCG
GAATCGCGCAAGCTTTCTAGACCAT

BO07664.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:39:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG9008-RA 894 CG9008-PA 1..891 17..907 4455 100 Plus
CG9008-RE 870 CG9008-PE 1..846 17..862 4230 100 Plus
CG9008-RD 927 CG9008-PD 1..846 17..862 4230 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:39:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG9008-RA 1987 CG9008-RA 434..1324 17..907 4455 100 Plus
CG9008-RE 2194 CG9008-RE 434..1279 17..862 4230 100 Plus
CG9008-RD 2125 CG9008-RD 434..1279 17..862 4230 100 Plus
CG9008-RE 2194 CG9008-RE 1483..1531 859..907 245 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:39:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13775471..13775808 710..373 1690 100 Minus
2L 23513712 2L 13775876..13776034 374..216 795 100 Minus
2L 23513712 2L 13775255..13775407 862..710 765 100 Minus
2L 23513712 2L 13779642..13779732 107..17 455 100 Minus
2L 23513712 2L 13776098..13776159 215..154 310 100 Minus
2L 23513712 2L 13777771..13777823 156..104 265 100 Minus
2L 23513712 2L 13775003..13775051 907..859 245 100 Minus
Blast to na_te.dros performed on 2014-11-27 15:39:39 has no hits.

BO07664.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:15:11 Download gff for BO07664.complete
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 1..894 17..908 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:36:54 Download gff for BO07664.complete
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 427..1329 12..916 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:26 Download gff for BO07664.complete
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 434..1324 17..909 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:15:11 Download gff for BO07664.complete
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 427..1329 12..916 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:13:11 Download gff for BO07664.complete
Subject Subject Range Query Range Percent Splice Strand
CG9008-RA 434..1324 17..909 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:13:11 Download gff for BO07664.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13774999..13775047 863..909 95 <- Minus
2L 13775255..13775406 711..862 100 <- Minus
2L 13775471..13775808 373..710 100 <- Minus
2L 13775878..13776034 216..372 100 <- Minus
2L 13776098..13776156 157..215 100 <- Minus
2L 13777771..13777822 105..156 100 <- Minus
2L 13779645..13779732 17..104 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:26 Download gff for BO07664.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13779645..13779732 17..104 100   Minus
arm_2L 13777771..13777822 105..156 100 <- Minus
arm_2L 13774999..13775047 863..909 95 <- Minus
arm_2L 13775255..13775406 711..862 100 <- Minus
arm_2L 13775471..13775808 373..710 100 <- Minus
arm_2L 13775878..13776034 216..372 100 <- Minus
arm_2L 13776098..13776156 157..215 100 <- Minus

BO07664.pep Sequence

Translation from 16 to 925

> BO07664.pep
MATTAAAMAATSVVVLDRGNNTTCTINLHGATVVSWRVNNQEQLFVSKLA
SFDGKKAIRGGIPFVFPQFGAWSFGPQHGFARITRWHLERPPDRLHNGDV
EAIFSLMDNDFTRSIWNYQFRITYRLILREKELHFHIGVYNPSKELSFTF
NMLLHTYLKVPDVRRCQITGLQGCHFIDKTRENALYQEGREVVTVNEWTD
RIYQHTPQEHVITNVVSGRKMRLHKYNFPDTVIWNPWIDRSREMSDFGDD
EFPNMLCVEAGNVTSPVILLPGTAFEASQILQIIIEGNVSRKTKRNRASF
LDH

BO07664.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:48:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG9008-PA 297 CG9008-PA 1..297 1..297 1590 100 Plus
CG9008-PE 289 CG9008-PE 1..283 1..283 1520 99.6 Plus
CG9008-PD 308 CG9008-PD 1..282 1..282 1517 100 Plus