Clone BO07674 Report

Search the DGRC for BO07674

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:76
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG10082-RB
Protein status:BO07674.pep: validated full length
Sequenced Size:2050

Clone Sequence Records

BO07674.3prime Sequence

936 bp (880 high quality bases) assembled on 2006-01-06

> BO07674.3prime
ATGGTCTAGAAAGCTTGCGGCGCGTTCCTCGGCCACAATTTCGTTGAGCA
GGCGGTTGAGGCTATCCAGACCGGTAAGGAATCCCCCGTCGGGTCCATGG
TGCACCGGAGCTGCCGCCGGAGTGGGTAGCATGGTGCCATTGCGCGGCAC
GAATGCCGTGTGGGCAAAGTCGATGAGCCGGACGTCCACGAAGCACTGGT
TATCATCAGTGGGCGGTGCCGACATGTCCAGCGACTTTGAGCTTTGCTGC
AGAAGTGCATTGCGACGCTGCTCATTGTTATTATCCAGGAGCAGGCCCGA
CAGCAGAGATTGCTGGTTTGAGATACTCTCACAGCTGCGCAGTTGTGGGG
CTGCCTTAGCTGGCGAGGATACGGCCGAAACGGGTGTCGAAGTGATCGTC
GACTTCTTCGCTTCTCGCAAATCCGATTCCCCCAGGCTCGCAGACTGCTG
ATCATCATCATTGCATCGTAGCCGCTTCACTGCACCCTTGACCGATTTCA
GAGAGGAGGCGCTGGATGAAGCGGGCGAAACCAGTGAACGGACTGTGGTG
CCGCCATTGGAAACGCTCGAGTTTCCGGCAGTGAGTGGCGGGGAGGACGC
AGAGTCGGCAGCTGTGGCGGCGTCAAAAGATTGCTGAGACTTATATCGCT
TAAACATAGCCTCCGTTGGCCCAATGATACTGCTTTCGTAATCTGAACTT
GCGTCATCACTGCTGTTATTGCATGTCTGCCGCCCACTGGCCACAGCCTT
TATCTGCTCGGATAATCCGGAGAAGTCGTCGCTGCTGTTGCTGCTATAGT
TCATCCATGAGTCACCGGAATGTGGCGATGAAGTCGTCACGCTGGGCAGC
GCTGGCTCTGGGTCCAGAAATACTGTCTCTTCGGAGATTGGAATGAATGC
TCCCTGGCCCTTTCCGGCAGGGCAGCGGCAGCGGCT

BO07674.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:08:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG10082-PA 2709 CG10082-RA 1807..2706 918..19 4500 100 Minus
CG10082-PB 2019 CG10082-RB 1117..2016 918..19 4500 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:53:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG10082-RB 2795 CG10082-RB 1519..2437 936..19 4555 99.8 Minus
CG10082-RA 4001 CG10082-RA 2218..3136 936..19 4555 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:53:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21656367..21657070 722..19 3520 100 Minus
2R 25286936 2R 21656093..21656308 936..722 1015 99.1 Minus
Blast to na_te.dros performed 2015-02-13 01:53:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2779..2902 801..678 114 63.1 Minus

BO07674.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:25:54 Download gff for BO07674.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10082-PB 1098..2019 15..936 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:10:57 Download gff for BO07674.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10082-PB 1098..2019 15..936 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:33:15 Download gff for BO07674.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10082-RA 2218..3147 7..936 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:25:23 Download gff for BO07674.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10082-RA 2218..3147 7..936 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:25:23 Download gff for BO07674.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21656093..21656307 723..936 99 -> Minus
2R 21656367..21657081 7..722 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:33:15 Download gff for BO07674.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17543598..17543812 723..936 99 -> Minus
arm_2R 17543872..17544586 7..722 99   Minus

BO07674.5prime Sequence

891 bp (779 high quality bases) assembled on 2006-01-06

> BO07674.5prime
GAAGTTATCAGTCGACATGGGCGTCATGCAGGCCACCACCATGGGCGGAG
CCAAGCTGGACAAGCGCTACTCGCCTAGTTTCCGGGATGACGCGGCCGCC
GTTCCCGTTCGCAAGATGAGCGCCTCCAAGAGGAAGCGGGATGAGGTGCT
GAGAATGAAGGTGCACAAGAATGGACAGGCCGCTGAAGTGATCAAAAGCA
TCTCACAACTGGACAACACCAATAAGCAATACTTCCTTATGCTCGAGAAC
ATCACATCGCAGTTCCGCAATCCCTGCATCCTGGACCTCAAGATGGGCAC
TCGTCAGCATGGAGATGATGCGTCGGCGGAGAAGCGCTCCAAGCAGATGG
CCAAGTGCGCGGCCAGCACATCCGGATCGCTCGGCGTTCGCTTGTGCGGA
ATGCAGACCTACCTGGCCGATCTGGAACAGTATGCCAAGCGTGACAAGTA
CTGGGGCCGCGAGCTTAACGAGGGCGGATTCAAGACTGCGTTGCACGATT
TCTTTCACAATGGCTACCGCCTGCGCATCCGTGTCATCCGCAAGATTCTG
CAGCGCCTGCTCCAATTACGAAGGGTGATTGAAAAGCAGTCGAGCTACAG
ATTCTACTCTTGCTCACTGCTCATTGTGTACGAGGGCTTTGAGGAGAATC
CAATGGCCCCCCCTCCCTCGATGAGTCAGGATGAGTGGCCAGAGGCGCCC
AGGTCGGCCACTGTGCCCGGCACTGTCTTCGATTATCATCCGGAGAACAG
CATAGACGAGGACGATCTGGAGGATGACGACGAGGCAGGCAACGAGGCTG
GCGATGAGCTGGAGGCGCACGACACCGACGATGATCTGCATCTGGTGGCC
GCCGACAGTGGCAACGCTTCGGCGACGAACAGCAGCACAGG

BO07674.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:08:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG10082-PB 2019 CG10082-RB 1..875 17..891 4375 100 Plus
CG10082-PA 2709 CG10082-RA 694..1565 20..891 4360 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:31:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG10082-RB 2795 CG10082-RB 422..1296 17..891 4375 100 Plus
CG10082-RA 4001 CG10082-RA 1124..1995 20..891 4360 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:31:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21655121..21655502 231..612 1910 100 Plus
2R 25286936 2R 21655591..21655870 612..891 1400 100 Plus
2R 25286936 2R 21654774..21654907 20..153 670 100 Plus
2R 25286936 2R 21654968..21655046 152..230 395 100 Plus
Blast to na_te.dros performed on 2015-02-11 17:31:42 has no hits.

BO07674.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:25:55 Download gff for BO07674.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10082-PB 1..875 17..891 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:10:59 Download gff for BO07674.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10082-PB 1..875 17..891 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:44:10 Download gff for BO07674.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10082-RB 418..1296 12..891 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:13:06 Download gff for BO07674.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10082-RB 418..1296 12..891 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:13:06 Download gff for BO07674.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21654970..21655046 154..230 100 -> Plus
2R 21654770..21654907 12..153 97 -> Plus
2R 21655121..21655502 231..612 100 -> Plus
2R 21655592..21655870 613..891 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:44:10 Download gff for BO07674.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17542275..17542412 12..153 97 -> Plus
arm_2R 17542475..17542551 154..230 100 -> Plus
arm_2R 17542626..17543007 231..612 100 -> Plus
arm_2R 17543097..17543375 613..891 100   Plus

BO07674.complete Sequence

2050 bp (2050 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ630891

> BO07674.complete
GAAGTTATCAGTCGACATGGGCGTCATGCAGGCCACCACCATGGGCGGAG
CCAAGCTGGACAAGCGCTACTCGCCTAGTTTCCGGGATGACGCGGCCGCC
GTTCCCGTTCGCAAGATGAGCGCCTCCAAGAGGAAGCGGGATGAGGTGCT
GAGAATGAAGGTGCACAAGAATGGACAGGCCGCTGAAGTGATCAAAAGCA
TCTCACAACTGGACAACACCAATAAGCAATACTTCCTTATGCTCGAGAAC
ATCACATCGCAGTTCCGCAATCCCTGCATCCTGGACCTCAAGATGGGCAC
TCGTCAGCATGGAGATGATGCGTCGGCGGAGAAGCGCTCCAAGCAGATGG
CCAAGTGCGCGGCCAGCACATCCGGATCGCTCGGCGTTCGCTTGTGCGGA
ATGCAGACCTACCTGGCCGATCTGGAACAGTATGCCAAGCGTGACAAGTA
CTGGGGCCGCGAGCTTAACGAGGGCGGATTCAAGACTGCGTTGCACGATT
TCTTTCACAATGGCTACCGCCTGCGCATCCGTGTCATCCGCAAGATTCTG
CAGCGCCTGCTCCAATTACGAAGGGTGATTGAAAAGCAGTCGAGCTACAG
ATTCTACTCTTGCTCACTGCTCATTGTGTACGAGGGCTTTGAGGAGAATC
CAATGGCCCCCCCTCCCTCGATGAGTCAGGATGAGTGGCCAGAGGCGCCC
AGGTCGGCCACTGTGCCCGGCACTGTCTTCGATTATCATCCGGAGAACAG
CATAGACGAGGACGATCTGGAGGATGACGACGAGGCAGGCAACGAGGCTG
GCGATGAGCTGGAGGCGCACGACACCGACGATGATCTGCATCTGGTGGCC
GCCGACAGTGGCAACGCTTCGGCGACGAACAGCAGCACAGGAGGAGATGC
CTGCAACTACGATGCAGATGCCTCCAACGATTCTAACTCATTGCTGAACC
TGGCTACCAGACGTCACCTGCACAAGCGTGGATTTGCAGAGGCAGCGGCG
CGAGGAGTTAAGCAGACGGCATCCCACAATACCACTACCGATGAGGAGGA
GGAGGATGAGCACCCGGCTATGCCACCGCCTCGGACTTGTGGTGTTATGG
CCGCCAAAGCGGCAGCCGCTGCCGCTGGCCTGGCCGGAAAGGGCCAGGGA
GCATTCATTCCAATCTCCGAAGAGACAGTATTTCTGGACCCAGAGCCAGC
GCTGCCCAGCGTGACGACTTCATCGCCACATTCCGGTGACTCATGGATGA
ACTATAGCAGCAACAGCAGCGACGACTTCTCCGGATTATCCGAGCAGATA
AAGGCTGTGGCCAGTGGGCGGCAGACATGCAATAACAGCAGTGATGACGC
AAGTTCAGATTACGAAAGCAGTATCATTGGGCCAACGGAGGCTATGTTTA
AGCGATATAAGTCTCAGCAATCTTTTGACGCCGCCACAGCTGCCGACTCT
GCGTCCTCCCCGCCACTCACTGCCGGAAACTCGAGCGTTTCCAATGGCGG
CACCACAGTCCGTTCACTGGTTTCGCCCGCTTCATCCAGCGCCTCCTCTC
TGAAATCGGTCAAGGGTGCAGTGAAGCGGCTACGATGCAATGATGATGAT
CAGCAGTCTGCGAGCCTGGGGGAATCGGATTTGCGAGAAGCGAAGAAGTC
GACGATCACTTCGACACCCGTTTCGGCCGTATCCTCGCCAGCTAAGGCAG
CCCCACAACTGCGCAGCTGTGAGAGTATCTCAAACCAGCAATCTCTGCTG
TCGGGCCTGCTCCTGGATAATAACAATGAGCAGCGTCGCAATGCACTTCT
GCAGCAAAGCTCAAAGTCGCTGGACATGTCGGCACCGCCCACTGATGATA
ACCAGTGCTTCGTGGACGTCCGGCTCATCGACTTTGCCCACACGGCATTC
GTGCCGCGCAATGGCACCATGCTACCCACTCCGGCGGCAGCTCCGGTGCA
CCATGGACCCGACGGGGGATTCCTTACCGGTCTGGATAGCCTCAACCGCC
TGCTCAACGAAATTGTGGCCGAGGAACGCGCCGCAAGCTTTCTAGACCAT

BO07674.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:20:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG10082-RB 2019 CG10082-PB 1..2016 17..2032 10080 100 Plus
CG10082-RA 2709 CG10082-PA 694..2706 20..2032 10065 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:20:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG10082-RB 2795 CG10082-RB 422..2437 17..2032 10080 100 Plus
CG10082-RA 4001 CG10082-RA 1124..3136 20..2032 10065 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:20:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21655591..21656308 612..1329 3590 100 Plus
2R 25286936 2R 21656367..21657070 1329..2032 3520 100 Plus
2R 25286936 2R 21655121..21655502 231..612 1910 100 Plus
2R 25286936 2R 21654774..21654907 20..153 670 100 Plus
2R 25286936 2R 21654968..21655046 152..230 395 100 Plus
Blast to na_te.dros performed 2014-11-27 01:20:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2779..2902 1250..1373 114 63.1 Plus

BO07674.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:02:26 Download gff for BO07674.complete
Subject Subject Range Query Range Percent Splice Strand
CG10082-RB 1..2019 17..2036 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:04:03 Download gff for BO07674.complete
Subject Subject Range Query Range Percent Splice Strand
CG10082-RB 418..2448 12..2044 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:51:19 Download gff for BO07674.complete
Subject Subject Range Query Range Percent Splice Strand
CG10082-RB 422..2437 17..2034 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:02:26 Download gff for BO07674.complete
Subject Subject Range Query Range Percent Splice Strand
CG10082-RB 418..2448 12..2044 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:23:26 Download gff for BO07674.complete
Subject Subject Range Query Range Percent Splice Strand
CG10082-RB 422..2437 17..2034 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:23:26 Download gff for BO07674.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21654773..21654907 17..153 98 -> Plus
2R 21654970..21655046 154..230 100 -> Plus
2R 21655121..21655502 231..612 100 -> Plus
2R 21655592..21656307 613..1328 100 -> Plus
2R 21656367..21657070 1329..2034 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:51:19 Download gff for BO07674.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17542278..17542412 17..153 98 -> Plus
arm_2R 17542475..17542551 154..230 100 -> Plus
arm_2R 17542626..17543007 231..612 100 -> Plus
arm_2R 17543097..17543812 613..1328 100 -> Plus
arm_2R 17543872..17544575 1329..2034 99   Plus

BO07674.pep Sequence

Translation from 16 to 2050

> BO07674.pep
MGVMQATTMGGAKLDKRYSPSFRDDAAAVPVRKMSASKRKRDEVLRMKVH
KNGQAAEVIKSISQLDNTNKQYFLMLENITSQFRNPCILDLKMGTRQHGD
DASAEKRSKQMAKCAASTSGSLGVRLCGMQTYLADLEQYAKRDKYWGREL
NEGGFKTALHDFFHNGYRLRIRVIRKILQRLLQLRRVIEKQSSYRFYSCS
LLIVYEGFEENPMAPPPSMSQDEWPEAPRSATVPGTVFDYHPENSIDEDD
LEDDDEAGNEAGDELEAHDTDDDLHLVAADSGNASATNSSTGGDACNYDA
DASNDSNSLLNLATRRHLHKRGFAEAAARGVKQTASHNTTTDEEEEDEHP
AMPPPRTCGVMAAKAAAAAAGLAGKGQGAFIPISEETVFLDPEPALPSVT
TSSPHSGDSWMNYSSNSSDDFSGLSEQIKAVASGRQTCNNSSDDASSDYE
SSIIGPTEAMFKRYKSQQSFDAATAADSASSPPLTAGNSSVSNGGTTVRS
LVSPASSSASSLKSVKGAVKRLRCNDDDQQSASLGESDLREAKKSTITST
PVSAVSSPAKAAPQLRSCESISNQQSLLSGLLLDNNNEQRRNALLQQSSK
SLDMSAPPTDDNQCFVDVRLIDFAHTAFVPRNGTMLPTPAAAPVHHGPDG
GFLTGLDSLNRLLNEIVAEERAASFLDH

BO07674.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:36:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG10082-PB 672 CG10082-PB 1..672 1..672 3446 100 Plus
CG10082-PA 902 CG10082-PA 232..902 2..672 3441 100 Plus
Ipk2-PA 309 CG13688-PA 94..252 67..217 168 30.1 Plus