Clone Sequence Records
BO07681.3prime Sequence
939 bp (799 high quality bases) assembled on 2006-01-06
> BO07681.3prime
ATGGTCTAGAAAGCTTGCCCATTTGTCTATGGACATATCGCTCAGTGCGT
CAGATAACTTCTCCAGATCCACGACATCATTGGTTTTTTCACCTTTGCTG
CTCCTGCCTATGGGATCCAGAGGTCCTTTTCTAATGGACATTTCTTTCAG
ACATGAGTCACACTTTAAGTTAGTGGAACTGGGACTGCGTTGGTCATCGG
AGGAAAGTCCTGCAACTGCCAGTGTGGCGACGGCCTGGTGCCTCCAAATG
AAATTCTCTCGACGTTTCAAGTCCTCGGCTAGAGCGCGCAATCTTTGGCG
CTCCAACCTTGTGGATTCCTGTAATCGTCGCACCTTGTCCTCCTTCTCCT
TCAGGTCGTTCTTTTCCTGGCACAAAATTTGGTCATATAGCATGCGGACA
TTGTCGTCCCTTCGCGAGCAGGCCCGTTTCACCATGGCATTCAGAGTATT
CTCGAAACTGAGATCCAACTCGGAGATCTGCAAGCTGGTGATCATATCGT
TCCGCAGAAAGGGCTCCAGGCAGGTGGTCAGAAAATTGAGTCGCACTGAC
TCGCCTGGCCATTTTTTCAGAAGCTGGCAGGCCGCACGGCAGGATTGATA
GATACCCTCCTGGGGAAGTTTCGTTTTGGCCAACGCCGACTTCTCGGCAA
TCTGCTTCTCCAGAATTTGGCTCCTGCTAAGGTATAGCTTTTCCGCTTCC
ACCGTGCGACAGTGCAGCGAGTCGATTTCCTTAAGCAGATCCTGGTTAGA
CCGCTTAATGCTCTCGAACTCGGGCGTGGAAATGGGATAGGGCACCCCAG
GGGAGAAAGAACTACTGCCACTGCCATAGTTGGAGACATTGGTGTCCGAG
TCCTCAATATCTTCAACCGGCGACATTTGCCCCCTCCTCACAGTAGTCGT
CCCATGGTACTCGTTCAGCAAATCGTCCATGGGGCGACT
BO07681.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:08:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7366-PA | 1170 | CG7366-RA | 303..1167 | 883..19 | 4325 | 100 | Minus |
| CG7366-PA | 1170 | CG7366-RA | 247..297 | 939..889 | 255 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:16:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7366-RA | 1340 | CG7366-RA | 338..1258 | 939..19 | 4560 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 07:16:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8201160..8202080 | 19..939 | 4545 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-02-12 07:16:30 has no hits.
BO07681.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:26:07 Download gff for
BO07681.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-PA | 247..1170 | 15..939 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:11:19 Download gff for
BO07681.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-PA | 247..1170 | 15..939 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:37:05 Download gff for
BO07681.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 338..1261 | 15..939 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 11:27:48 Download gff for
BO07681.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 338..1261 | 15..939 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 11:27:48 Download gff for
BO07681.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8201157..8202080 | 15..939 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:37:05 Download gff for
BO07681.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8194257..8195180 | 15..939 | 99 | | Plus |
BO07681.5prime Sequence
885 bp (823 high quality bases) assembled on 2006-01-06
> BO07681.5prime
GAAGTTATCAGTCGACATGACTCAGTTAAGCGAGTTCGCCCTGGACAGCC
ACTTTGCCTCCGAGCTGCGCAGCCTGCAGTTGTATTCCAAGGAGCACCCT
GTCAGCCAAGATGACCACGACATAAGTCAGCGTTGGATGCAGCACTTCCA
AAACGCCAAGGGTTTGGATAAATTCGCACGAAACTGCATGCTGCTGATGA
TGTGCGAACAGTTGCGAGATCTTGGCCACTTGAGCAAACCCTTCACCGAA
CTGAAGAACTTGAGTCGCCCCATGGACGATTTGCTGAACGAGTACCATGG
GACGACTACTGTGGAGGAGGGGCAAATGTCGCCGGTTGAAGATATTGAGG
ACTCGGACACCAATGTCTCCAACTATGGCAGTGGCAGTAGTTCTTTCTCC
CCTGGGGTGCCCTATCCCATTTCCACGCCCGAGTTCGAGAGCATTAAGCG
GTCTAACCAGGATCTGCTTAAGGAAATCGACTCGCTGCACTGTCGCACGG
TGGAAGCGGAAAAGCTATACCTTAGCAGGAGCCAAATTCTGGAGAAGCAG
ATTGCCGAGAAGTCGGCGTTGGCCAAAACGAAACTTCCCCAGGAGGGTAT
CTATCAATCCTGCCGTGCGGCCTGCCAGCTTCTGAAAAAATGGCCAGGCG
AGTCAGTGCGACTCAATTTTCTGACCACCTGCCTGGAGCCCTTTCTGCGG
AACGATATGATCACCAGCTTGCAGATCTCCGAGTTGGATCTCAGTTTCGA
GAATACTCTGAATGCCATGGTGAAACGGGCCTGCTCGCGAAGGGACGACA
ATGTCCGCATGCTATATGACCAAATTTTGTGCCAGGAAAAGAACGACCTG
AAGGAGAAGGAGGACAAGGTGCGACGATTACAGGA
BO07681.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:08:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7366-PA | 1170 | CG7366-RA | 1..869 | 17..885 | 4345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:55:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7366-RA | 1340 | CG7366-RA | 92..960 | 17..885 | 4345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:55:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8201458..8202326 | 885..17 | 4345 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 02:55:41 has no hits.
BO07681.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:26:08 Download gff for
BO07681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-PA | 1..868 | 17..884 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:11:21 Download gff for
BO07681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-PA | 1..868 | 17..884 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:22:58 Download gff for
BO07681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 87..959 | 9..884 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:23:05 Download gff for
BO07681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 87..959 | 9..884 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:23:05 Download gff for
BO07681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8201459..8202331 | 9..884 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:22:58 Download gff for
BO07681.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8194559..8195431 | 9..884 | 99 | | Minus |
BO07681.complete Sequence
1201 bp (1201 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630894
> BO07681.complete
GAAGTTATCAGTCGACATGACTCAGTTAAGCGAGTTCGCCCTGGACAGCC
ACTTTGCCTCCGAGCTGCGCAGCCTGCAGTTGTATTCCAAGGAGCACCCT
GTCAGCCAAGATGACCACGACATAAGTCAGCGTTGGATGCAGCACTTCCA
AAACGCCAAGGGTTTGGATAAATTCGCACGAAACTGCATGCTGCTGATGA
TGTGCGAACAGTTGCGAGATCTTGGCCACTTGAGCAAACCCTTCACCGAA
CTGAAGAACTTGAGTCGCCCCATGGACGATTTGCTGAACGAGTACCATGG
GACGACTACTGTGGAGGAGGGGCAAATGTCGCCGGTTGAAGATATTGAGG
ACTCGGACACCAATGTCTCCAACTATGGCAGTGGCAGTAGTTCTTTCTCC
CCTGGGGTGCCCTATCCCATTTCCACGCCCGAGTTCGAGAGCATTAAGCG
GTCTAACCAGGATCTGCTTAAGGAAATCGACTCGCTGCACTGTCGCACGG
TGGAAGCGGAAAAGCTATACCTTAGCAGGAGCCAAATTCTGGAGAAGCAG
ATTGCCGAGAAGTCGGCGTTGGCCAAAACGAAACTTCCCCAGGAGGGTAT
CTATCAATCCTGCCGTGCGGCCTGCCAGCTTCTGAAAAAATGGCCAGGCG
AGTCAGTGCGACTCAATTTTCTGACCACCTGCCTGGAGCCCTTTCTGCGG
AACGATATGATCACCAGCTTGCAGATCTCCGAGTTGGATCTCAGTTTCGA
GAATACTCTGAATGCCATGGTGAAACGGGCCTGCTCGCGAAGGGACGACA
ATGTCCGCATGCTATATGACCAAATTTTGTGCCAGGAAAAGAACGACCTG
AAGGAGAAGGAGGACAAGGTGCGACGATTACAGGAATCCACAAGGTTGGA
GCGCCAAAGATTGCGCGCTCTAGCCGAGGACTTGAAACGTCGAGAGAATT
TCATTTGGAGGCACCAGGCCGTCGCCACACTGGCAGTTGCAGGACTTTCC
TCCGATGACCAACGCAGTCCCAGTTCCACTAACTTAAAGTGTGACTCATG
TCTGAAAGAAATGTCCATTAGAAAAGGACCTCTGGATCCCATAGGCAGGA
GCAGCAAAGGTGAAAAAACCAATGATGTCGTGGATCTGGAGAAGTTATCT
GACGCACTGAGCGATATGTCCATAGACAAATGGGCAAGCTTTCTAGACCA
T
BO07681.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:33:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7366-RA | 1170 | CG7366-PA | 1..1167 | 17..1183 | 5835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:33:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7366-RA | 1340 | CG7366-RA | 92..1258 | 17..1183 | 5835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:33:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8201160..8202326 | 1183..17 | 5835 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:33:43 has no hits.
BO07681.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:15:06 Download gff for
BO07681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 1..1170 | 17..1187 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:36:47 Download gff for
BO07681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 66..1240 | 9..1187 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:04:03 Download gff for
BO07681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 92..1258 | 17..1185 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:15:06 Download gff for
BO07681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 66..1240 | 9..1187 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:22:06 Download gff for
BO07681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7366-RA | 92..1258 | 17..1185 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:22:06 Download gff for
BO07681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8201158..8202326 | 17..1185 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:04:03 Download gff for
BO07681.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8194258..8195426 | 17..1185 | 99 | | Minus |
BO07681.pep Sequence
Translation from 16 to 1201
> BO07681.pep
MTQLSEFALDSHFASELRSLQLYSKEHPVSQDDHDISQRWMQHFQNAKGL
DKFARNCMLLMMCEQLRDLGHLSKPFTELKNLSRPMDDLLNEYHGTTTVE
EGQMSPVEDIEDSDTNVSNYGSGSSSFSPGVPYPISTPEFESIKRSNQDL
LKEIDSLHCRTVEAEKLYLSRSQILEKQIAEKSALAKTKLPQEGIYQSCR
AACQLLKKWPGESVRLNFLTTCLEPFLRNDMITSLQISELDLSFENTLNA
MVKRACSRRDDNVRMLYDQILCQEKNDLKEKEDKVRRLQESTRLERQRLR
ALAEDLKRRENFIWRHQAVATLAVAGLSSDDQRSPSSTNLKCDSCLKEMS
IRKGPLDPIGRSSKGEKTNDVVDLEKLSDALSDMSIDKWASFLDH
BO07681.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:48:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7366-PA | 389 | CG7366-PA | 1..389 | 1..389 | 2005 | 100 | Plus |
| CG8006-PA | 503 | CG8006-PA | 1..94 | 1..95 | 180 | 40 | Plus |
