Clone BO07695 Report

Search the DGRC for BO07695

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:76
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptCG6465-RA
Protein status:BO07695.pep: validated full length
Sequenced Size:1237

Clone Sequence Records

BO07695.3prime Sequence

884 bp (865 high quality bases) assembled on 2006-01-06

> BO07695.3prime
ATGGTCTAGAAAGCTTGCGACATTCGCAATGTTGCTAATTATTTTCTGAA
ATATCTGCACACCGCGCAAATAGATATCCGCCTGAATGAACTCATCGTGA
TCGTGGAGCAATACAGGTGTATTATTCATGGGTGAGAAGCCCAAAGCTGG
GATGCCAACGGCACGAATGTATCTGCTATCAGTTCCTCCGGTAAATATTT
GCGGTTTGATGGATATGTGCATCTCATCGGTAGCTTTCTTGAAAGCAAGC
CAGAAGGGATTACTCCCATCGATGGCGGTGGGCGGGACTTTAGGTTGCTT
CTGTTCGTAAGTGATCTCGATGCCACCACCCACGTCGGCACACCATTTGT
GGAGGTTAGCCTCAAACTCCTCAAAGTCCACATCTAGAGCCAAACGACAA
TCGAAGCAGACCATTAGCAAGGGAGGCACCACATTGCTCTGAACTCCGCC
ACCGAGTTTGGTCAAATTAATGGTCGTTACATCGCCAATGACCAACTCTG
GATTATTCTGCAATCTTTGAACCTGACTCCTACGAAACTCCATCATCTTT
CCGACTATATAGTTCAGTTTTTCACCAGCAGTATTGGGCAGCAAAAGCGA
TCCATGACCAGCAGTCCCACTGATGTTGAAATATACACGCCAAACTGCTC
GTTCTGCATAGAAAAGAGGCAGCTGCTCATCGGGTGAAGCCAATCCCTCG
TCCATTGCAAATCCCACATTAAGAGCACGGAAATCTTCAGTTGGCACAAA
AGGTCTCATGCCATAACGACCGCCCATTTCCTCATCCGCCACAAAGGAAA
TGTGGATAGTTCGTTTGAATTTCGCTCCACTTCTCTTGAGCGCTCTAACT
GCGGCTAGATGCTGCATTCCCACGGACTTCATAT

BO07695.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:08:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG6465-PA 1206 CG6465-RA 338..1203 884..19 4330 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 02:56:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG6465-RA 1377 CG6465-RA 429..1294 884..19 4330 100 Minus
CG17110-RC 2911 CG17110-RC 632..727 631..536 240 83.3 Minus
CG6726-RC 2911 CG6726-RC 632..727 631..536 240 83.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 02:56:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10676094..10676377 355..638 1420 100 Plus
3R 32079331 3R 10675643..10675844 19..220 1010 100 Plus
3R 32079331 3R 10676440..10676589 637..786 750 100 Plus
3R 32079331 3R 10675902..10676036 220..354 675 100 Plus
3R 32079331 3R 10676650..10676748 786..884 495 100 Plus
3R 32079331 3R 23092608..23092703 631..536 240 83.3 Minus
3R 32079331 3R 23098473..23098537 623..559 190 86.2 Minus
Blast to na_te.dros performed on 2015-02-11 02:56:12 has no hits.

BO07695.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:26:31 Download gff for BO07695.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6465-PA 338..1206 18..884 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:11:53 Download gff for BO07695.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6465-PA 338..1206 18..884 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:23:04 Download gff for BO07695.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6465-RA 429..1299 11..884 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:23:13 Download gff for BO07695.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6465-RA 429..1299 11..884 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:23:13 Download gff for BO07695.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 10675638..10675844 11..220 98 <- Plus
3R 10675903..10676036 221..354 100 <- Plus
3R 10676094..10676377 355..638 100 <- Plus
3R 10676442..10676588 639..785 100 <- Plus
3R 10676650..10676748 786..884 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:23:04 Download gff for BO07695.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6501360..6501566 11..220 98 <- Plus
arm_3R 6501625..6501758 221..354 100 <- Plus
arm_3R 6501816..6502099 355..638 100 <- Plus
arm_3R 6502164..6502310 639..785 100 <- Plus
arm_3R 6502372..6502470 786..884 100   Plus

BO07695.5prime Sequence

810 bp (729 high quality bases) assembled on 2006-01-06

> BO07695.5prime
GAAGTTATCAGTCGACATGGCCACCAGCAAGTGGGAATCCGATGAGGAGA
TACAGTACTTTCGCGAGTATCTGCGCATCCCAAGTGTCCATCCCGATCCG
GACTATGCACCATGCGTCGAATTTCTCAGACGACAGGCAAATCTGATGGA
TCTGCCAATGAAGGTGTATTACCCGGCAAATGAACAGAATCCCGTAGTGG
TTTTGACATGGAAGGGACTCAATCCCGAGTTGCCCAGCATTCTGCTGAAC
TCCCACATGGACGTGGTTCCCGTATTTCCAGAAAACTGGACTCACCCGCC
ATTTGGAGCCGACATCGATGAGGAGGGTCGCATTTTTGCCAGGGGAACAC
AAGATATGAAGTCCGTGGGAATGCAGCATCTAGCCGCAGTTAGAGCGCTC
AAGAGAAGTGGAGCGAAATTCAAACGAACTATCCACATTTCCTTTGTGGC
GGATGAGGAAATGGGCGGTCGTTATGGCATGAGACCTTTTGTGCCAACTG
AAGATTTCCGTGCTCTTAATGTGGGATTTGCAATGGACGAGGGATTGGCT
TCACCCGATGAGCAGCTGCCTCTTTTCTATGCAGAACGAGCAGTTTGGCG
TGTATATTTCAACATCAGTGGGACTGCTGGTCATGGATCGCTTTTGCTGC
CCAATACTGCTGGTGAAAAACTGAACTATATAGTCGGAAAGATGATGGAG
TTTCGTAGGAGTCAGGTTCAAAGATTGCAGAATAATCCAGAGTTGGTCAT
TGGCGATGTAACGACCATTAATTTGACCAAACTCGGTGGCGGAGTTCAGA
GCAATGTGGT

BO07695.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:08:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG6465-PA 1206 CG6465-RA 1..794 17..810 3970 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:34:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG6465-RA 1377 CG6465-RA 92..885 17..810 3970 100 Plus
CG17110-RC 2911 CG17110-RC 632..727 607..702 240 83.3 Plus
CG6726-RC 2911 CG6726-RC 632..727 607..702 240 83.3 Plus
CG17110-RC 2911 CG17110-RC 1808..1932 246..370 190 76.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:34:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10676650..10676995 452..107 1730 100 Minus
3R 32079331 3R 10676167..10676377 810..600 1055 100 Minus
3R 32079331 3R 10676440..10676589 601..452 750 100 Minus
3R 32079331 3R 10677070..10677160 107..17 455 100 Minus
3R 32079331 3R 23092608..23092703 607..702 240 83.3 Plus
3R 32079331 3R 23098473..23098537 615..679 190 86.2 Plus
3R 32079331 3R 23093968..23094092 246..370 190 76.8 Plus
Blast to na_te.dros performed on 2015-02-13 05:34:57 has no hits.

BO07695.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:26:32 Download gff for BO07695.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6465-PA 1..794 17..810 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:11:54 Download gff for BO07695.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6465-PA 1..794 17..810 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:04:38 Download gff for BO07695.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6465-RA 82..885 6..810 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:48:31 Download gff for BO07695.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6465-RA 82..885 6..810 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:48:31 Download gff for BO07695.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10676167..10676377 600..810 100 <- Minus
3R 10676442..10676588 453..599 100 <- Minus
3R 10676650..10676994 108..452 100 <- Minus
3R 10677070..10677170 6..107 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:04:38 Download gff for BO07695.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6502372..6502716 108..452 100 <- Minus
arm_3R 6501889..6502099 600..810 100 <- Minus
arm_3R 6502164..6502310 453..599 100 <- Minus
arm_3R 6502792..6502892 6..107 96   Minus

BO07695.complete Sequence

1237 bp (1237 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630900

> BO07695.complete
GAAGTTATCAGTCGACATGGCCACCAGCAAGTGGGAATCCGATGAGGAGA
TACAGTACTTTCGCGAGTATCTGCGCATCCCAAGTGTCCATCCCGATCCG
GACTATGCACCATGCGTCGAATTTCTCAGACGACAGGCAAATCTGATGGA
TCTGCCAATGAAGGTGTATTACCCGGCAAATGAACAGAATCCCGTAGTGG
TTTTGACATGGAAGGGACTCAATCCCGAGTTGCCCAGCATTCTGCTGAAC
TCCCACATGGACGTGGTTCCCGTATTTCCAGAAAACTGGACTCACCCGCC
ATTTGGAGCCGACATCGATGAGGAGGGTCGCATTTTTGCCAGGGGAACAC
AAGATATGAAGTCCGTGGGAATGCAGCATCTAGCCGCAGTTAGAGCGCTC
AAGAGAAGTGGAGCGAAATTCAAACGAACTATCCACATTTCCTTTGTGGC
GGATGAGGAAATGGGCGGTCGTTATGGCATGAGACCTTTTGTGCCAACTG
AAGATTTCCGTGCTCTTAATGTGGGATTTGCAATGGACGAGGGATTGGCT
TCACCCGATGAGCAGCTGCCTCTTTTCTATGCAGAACGAGCAGTTTGGCG
TGTATATTTCAACATCAGTGGGACTGCTGGTCATGGATCGCTTTTGCTGC
CCAATACTGCTGGTGAAAAACTGAACTATATAGTCGGAAAGATGATGGAG
TTTCGTAGGAGTCAGGTTCAAAGATTGCAGAATAATCCAGAGTTGGTCAT
TGGCGATGTAACGACCATTAATTTGACCAAACTCGGTGGCGGAGTTCAGA
GCAATGTGGTGCCTCCCTTGCTAATGGTCTGCTTCGATTGTCGTTTGGCT
CTAGATGTGGACTTTGAGGAGTTTGAGGCTAACCTCCACAAATGGTGTGC
CGACGTGGGTGGTGGCATCGAGATCACTTACGAACAGAAGCAACCTAAAG
TCCCGCCCACCGCCATCGATGGGAGTAATCCCTTCTGGCTTGCTTTCAAG
AAAGCTACCGATGAGATGCACATATCCATCAAACCGCAAATATTTACCGG
AGGAACTGATAGCAGATACATTCGTGCCGTTGGCATCCCAGCTTTGGGCT
TCTCACCCATGAATAATACACCTGTATTGCTCCACGATCACGATGAGTTC
ATTCAGGCGGATATCTATTTGCGCGGTGTGCAGATATTTCAGAAAATAAT
TAGCAACATTGCGAATGTCGCAAGCTTTCTAGACCAT

BO07695.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG6465-RA 1206 CG6465-PA 1..1203 17..1219 6015 100 Plus
CG6726-RC 1206 CG6726-PC 591..686 607..702 240 83.3 Plus
CG6726-RA 1206 CG6726-PA 591..686 607..702 240 83.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:15:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG6465-RA 1377 CG6465-RA 92..1294 17..1219 6015 100 Plus
CG17110-RC 2911 CG17110-RC 632..727 607..702 240 83.3 Plus
CG6726-RC 2911 CG6726-RC 632..727 607..702 240 83.3 Plus
CG17110-RC 2911 CG17110-RC 1808..1932 246..370 190 76.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:15:42
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10676650..10676995 452..107 1730 100 Minus
3R 32079331 3R 10676094..10676377 883..600 1420 100 Minus
3R 32079331 3R 10675643..10675844 1219..1018 1010 100 Minus
3R 32079331 3R 10676440..10676589 601..452 750 100 Minus
3R 32079331 3R 10675902..10676036 1018..884 675 100 Minus
3R 32079331 3R 10677070..10677160 107..17 455 100 Minus
3R 32079331 3R 23092608..23092703 607..702 240 83.3 Plus
3R 32079331 3R 23093968..23094092 246..370 190 76.8 Plus
3R 32079331 3R 23098473..23098537 615..679 190 86.2 Plus
Blast to na_te.dros performed on 2014-11-28 00:15:43 has no hits.

BO07695.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:15:10 Download gff for BO07695.complete
Subject Subject Range Query Range Percent Splice Strand
CG6465-RA 1..1206 17..1220 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:36:52 Download gff for BO07695.complete
Subject Subject Range Query Range Percent Splice Strand
CG6465-RA 1..1218 6..1227 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:48:37 Download gff for BO07695.complete
Subject Subject Range Query Range Percent Splice Strand
CG6465-RA 92..1294 17..1221 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:15:10 Download gff for BO07695.complete
Subject Subject Range Query Range Percent Splice Strand
CG6465-RA 1..1218 6..1227 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:17:15 Download gff for BO07695.complete
Subject Subject Range Query Range Percent Splice Strand
CG6465-RA 92..1294 17..1221 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:17:15 Download gff for BO07695.complete
Subject Subject Range Query Range Percent Splice Strand
3R 10675641..10675844 1018..1221 99 <- Minus
3R 10675903..10676036 884..1017 100 <- Minus
3R 10676094..10676377 600..883 100 <- Minus
3R 10676442..10676588 453..599 100 <- Minus
3R 10676650..10676994 108..452 100 <- Minus
3R 10677070..10677160 17..107 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:48:37 Download gff for BO07695.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6501363..6501566 1018..1221 99 <- Minus
arm_3R 6501625..6501758 884..1017 100 <- Minus
arm_3R 6501816..6502099 600..883 100 <- Minus
arm_3R 6502164..6502310 453..599 100 <- Minus
arm_3R 6502372..6502716 108..452 100 <- Minus
arm_3R 6502792..6502882 17..107 100   Minus

BO07695.pep Sequence

Translation from 16 to 1237

> BO07695.pep
MATSKWESDEEIQYFREYLRIPSVHPDPDYAPCVEFLRRQANLMDLPMKV
YYPANEQNPVVVLTWKGLNPELPSILLNSHMDVVPVFPENWTHPPFGADI
DEEGRIFARGTQDMKSVGMQHLAAVRALKRSGAKFKRTIHISFVADEEMG
GRYGMRPFVPTEDFRALNVGFAMDEGLASPDEQLPLFYAERAVWRVYFNI
SGTAGHGSLLLPNTAGEKLNYIVGKMMEFRRSQVQRLQNNPELVIGDVTT
INLTKLGGGVQSNVVPPLLMVCFDCRLALDVDFEEFEANLHKWCADVGGG
IEITYEQKQPKVPPTAIDGSNPFWLAFKKATDEMHISIKPQIFTGGTDSR
YIRAVGIPALGFSPMNNTPVLLHDHDEFIQADIYLRGVQIFQKIISNIAN
VASFLDH

BO07695.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:48:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG6465-PA 401 CG6465-PA 1..401 1..401 2128 100 Plus
CG6726-PC 401 CG6726-PC 1..400 1..400 1409 64 Plus
CG6726-PA 401 CG6726-PA 1..400 1..400 1409 64 Plus
CG6726-PB 401 CG6726-PB 1..400 1..400 1409 64 Plus
CG17109-PB 400 CG17109-PB 1..400 1..401 1300 60.3 Plus