Clone BO07702 Report

Search the DGRC for BO07702

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:77
Well:2
Vector:pDNR-Dual
Associated Gene/TranscriptAdam-RA
Protein status:BO07702.pep: validated full length
Sequenced Size:742

Clone Sequence Records

BO07702.5prime Sequence

740 bp (739 high quality bases) assembled on 2006-01-06

> BO07702.5prime
GAAGTTATCAGTCGACATGGCCGACGATTGGGAATCCGCAGCAGACAGCG
AGGTGGTCATCCGGCCGACTGCCGCCGCCAGCGTAAACAAGTGGGAGGGC
GAGGACGAGGATGAGGACATCAAGGACAGCTGGGAGGATGAGGAGGAAAA
AAAGGACGAGGAGAAGCCTACGAAAACAGAAGCACCAGCCAAACCGAAGC
CAAATAAGGCGCTAAAAGCCAAACTGGAACAGCAGGCGCTCCTAGAGGAG
GAAGCGGAGGCAAAACGTTTGGCCAACCTATCGCCTGCAGAAAAGTTGGC
TGAGAAGCTGCGATTGCAAAAAATCCAGGAGGCCTCTGATCTCAAGCATG
CCCAGGAAGCGTTCGGTGTGACGAGTACGTGCGGAGGTCTTGACGCCTTC
AACCCCGAGACCAAGGAGGAGTTCAAGGAATTTGGCGCAACGCTCAGCTG
GAAGGTGGGCCAATTCCGCGAGTCGGAGCACTTCCCCCAATTTGTTGAGG
ATCTGGTGCGCAGCCTATGCGTGAATCTGAGCGCTGCTGACATCAAAAAG
GTCAAGATGAACGTGGAAATCTTGCACTCGGAAAAGCTGAAGCTGGAAAA
GGCCAATGCTAAAAAGCCCGCTGGAAAGGGCAAGGGCAAGGTCACTCTCC
GCACCGAAAACGACGACATTGACGGTTACCAAAAGTACGGAAATGACTTC
ACCGAAGACTATGACGACTTCATGGCAAGCTTTCTAGACC

BO07702.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:08:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG12131-PA 711 Adam-RA 1..708 17..724 3540 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:33:22
Subject Length Description Subject Range Query Range Score Percent Strand
Adam-RB 1228 CG12131-RB 155..864 15..724 3550 100 Plus
Adam-RA 1363 CG12131-RA 290..999 15..724 3550 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:33:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9969918..9970207 238..527 1450 100 Plus
2R 25286936 2R 9970272..9970409 528..665 690 100 Plus
2R 25286936 2R 9969739..9969854 123..238 580 100 Plus
2R 25286936 2R 9969460..9969553 32..125 470 100 Plus
2R 25286936 2R 9970474..9970533 665..724 300 100 Plus
Blast to na_te.dros performed on 2015-02-11 17:33:19 has no hits.

BO07702.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:26:39 Download gff for BO07702.5prime
Subject Subject Range Query Range Percent Splice Strand
Adam-PA 1..711 17..727 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:12:02 Download gff for BO07702.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12131-PA 1..711 17..727 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:44:17 Download gff for BO07702.5prime
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 285..1003 9..728 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:17:10 Download gff for BO07702.5prime
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 285..1003 9..728 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:17:10 Download gff for BO07702.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 9969919..9970207 239..527 100 -> Plus
2R 9970272..9970408 528..664 100 -> Plus
2R 9970474..9970537 665..728 96   Plus
2R 9969461..9969552 33..124 100 -> Plus
2R 9969741..9969854 125..238 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:44:17 Download gff for BO07702.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5856966..5857057 33..124 100 -> Plus
arm_2R 5857246..5857359 125..238 100 -> Plus
arm_2R 5857424..5857712 239..527 100 -> Plus
arm_2R 5857777..5857913 528..664 100 -> Plus
arm_2R 5857979..5858042 665..728 96   Plus

BO07702.3prime Sequence

740 bp (739 high quality bases) assembled on 2006-01-06

> BO07702.3prime
ATGGTCTAGAAAGCTTGCCATGAAGTCGTCATAGTCTTCGGTGAAGTCAT
TTCCGTACTTTTGGTAACCGTCAATGTCGTCGTTTTCGGTGCGGAGAGTG
ACCTTGCCCTTGCCCTTTCCAGCGGGCTTTTTAGCATTGGCCTTTTCCAG
CTTCAGCTTTTCCGAGTGCAAGATTTCCACGTTCATCTTGACCTTTTTGA
TGTCAGCAGCGCTCAGATTCACGCATAGGCTGCGCACCAGATCCTCAACA
AATTGGGGGAAGTGCTCCGACTCGCGGAATTGGCCCACCTTCCAGCTGAG
CGTTGCGCCAAATTCCTTGAACTCCTCCTTGGTCTCGGGGTTGAAGGCGT
CAAGACCTCCGCACGTACTCGTCACACCGAACGCTTCCTGGGCATGCTTG
AGATCAGAGGCCTCCTGGATTTTTTGCAATCGCAGCTTCTCAGCCAACTT
TTCTGCAGGCGATAGGTTGGCCAAACGTTTTGCCTCCGCTTCCTCCTCTA
GGAGCGCCTGCTGTTCCAGTTTGGCTTTTAGCGCCTTATTTGGCTTCGGT
TTGGCTGGTGCTTCTGTTTTCGTAGGCTTCTCCTCGTCCTTTTTTTCCTC
CTCATCCTCCCAGCTGTCCTTGATGTCCTCATCCTCGTCCTCGCCCTCCC
ACTTGTTTACGCTGGCGGCGGCAGTCGGCCGGATGACCACCTCGCTGTCT
GCTGCGGATTCCCAATCGTCGGCCATGTCGACTGATAACT

BO07702.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:08:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG12131-PA 711 Adam-RA 1..708 726..19 3540 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:00:59
Subject Length Description Subject Range Query Range Score Percent Strand
Adam-RB 1228 CG12131-RB 155..864 728..19 3550 100 Minus
Adam-RA 1363 CG12131-RA 290..999 728..19 3550 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:00:56
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9969918..9970207 505..216 1450 100 Minus
2R 25286936 2R 9970272..9970409 215..78 690 100 Minus
2R 25286936 2R 9969739..9969854 620..505 580 100 Minus
2R 25286936 2R 9969460..9969553 711..618 470 100 Minus
2R 25286936 2R 9970474..9970533 78..19 300 100 Minus
Blast to na_te.dros performed on 2015-02-11 22:00:58 has no hits.

BO07702.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:26:37 Download gff for BO07702.3prime
Subject Subject Range Query Range Percent Splice Strand
Adam-PA 1..711 16..726 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:12:01 Download gff for BO07702.3prime
Subject Subject Range Query Range Percent Splice Strand
CG12131-PA 1..711 16..726 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:46:16 Download gff for BO07702.3prime
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 285..1003 15..734 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:47:33 Download gff for BO07702.3prime
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 285..1003 15..734 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:47:33 Download gff for BO07702.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 9969461..9969552 619..710 100 -> Minus
2R 9969741..9969854 505..618 100 -> Minus
2R 9969919..9970207 216..504 100 -> Minus
2R 9970272..9970408 79..215 100 -> Minus
2R 9970474..9970537 15..78 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:46:16 Download gff for BO07702.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5856966..5857057 619..710 100 -> Minus
arm_2R 5857246..5857359 505..618 100 -> Minus
arm_2R 5857424..5857712 216..504 100 -> Minus
arm_2R 5857777..5857913 79..215 100 -> Minus
arm_2R 5857979..5858042 15..78 96   Minus

BO07702.complete Sequence

742 bp (742 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630901

> BO07702.complete
GAAGTTATCAGTCGACATGGCCGACGATTGGGAATCCGCAGCAGACAGCG
AGGTGGTCATCCGGCCGACTGCCGCCGCCAGCGTAAACAAGTGGGAGGGC
GAGGACGAGGATGAGGACATCAAGGACAGCTGGGAGGATGAGGAGGAAAA
AAAGGACGAGGAGAAGCCTACGAAAACAGAAGCACCAGCCAAACCGAAGC
CAAATAAGGCGCTAAAAGCCAAACTGGAACAGCAGGCGCTCCTAGAGGAG
GAAGCGGAGGCAAAACGTTTGGCCAACCTATCGCCTGCAGAAAAGTTGGC
TGAGAAGCTGCGATTGCAAAAAATCCAGGAGGCCTCTGATCTCAAGCATG
CCCAGGAAGCGTTCGGTGTGACGAGTACGTGCGGAGGTCTTGACGCCTTC
AACCCCGAGACCAAGGAGGAGTTCAAGGAATTTGGCGCAACGCTCAGCTG
GAAGGTGGGCCAATTCCGCGAGTCGGAGCACTTCCCCCAATTTGTTGAGG
ATCTGGTGCGCAGCCTATGCGTGAATCTGAGCGCTGCTGACATCAAAAAG
GTCAAGATGAACGTGGAAATCTTGCACTCGGAAAAGCTGAAGCTGGAAAA
GGCCAATGCTAAAAAGCCCGCTGGAAAGGGCAAGGGCAAGGTCACTCTCC
GCACCGAAAACGACGACATTGACGGTTACCAAAAGTACGGAAATGACTTC
ACCGAAGACTATGACGACTTCATGGCAAGCTTTCTAGACCAT

BO07702.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:34:50
Subject Length Description Subject Range Query Range Score Percent Strand
Adam-RB 711 CG12131-PB 1..708 17..724 3540 100 Plus
Adam-RA 711 CG12131-PA 1..708 17..724 3540 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:34:51
Subject Length Description Subject Range Query Range Score Percent Strand
Adam-RB 1228 CG12131-RB 155..864 15..724 3550 100 Plus
Adam-RA 1363 CG12131-RA 290..999 15..724 3550 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:34:48
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9969918..9970207 238..527 1450 100 Plus
2R 25286936 2R 9970272..9970409 528..665 690 100 Plus
2R 25286936 2R 9969739..9969854 123..238 580 100 Plus
2R 25286936 2R 9969460..9969553 32..125 470 100 Plus
2R 25286936 2R 9970474..9970533 665..724 300 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:34:49 has no hits.

BO07702.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:14:54 Download gff for BO07702.complete
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 1..711 17..727 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:36:34 Download gff for BO07702.complete
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 254..972 9..728 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:30:36 Download gff for BO07702.complete
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 292..999 17..726 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:14:55 Download gff for BO07702.complete
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 254..972 9..728 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:48:28 Download gff for BO07702.complete
Subject Subject Range Query Range Percent Splice Strand
Adam-RA 292..999 17..726 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:48:28 Download gff for BO07702.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9969461..9969552 33..124 100 -> Plus
2R 9969741..9969854 125..238 100 -> Plus
2R 9969919..9970207 239..527 100 -> Plus
2R 9970272..9970408 528..664 100 -> Plus
2R 9970474..9970533 665..726 96   Plus
2R 9969220..9969235 17..32 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:30:36 Download gff for BO07702.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5856725..5856740 17..32 100 -> Plus
arm_2R 5856966..5857057 33..124 100 -> Plus
arm_2R 5857246..5857359 125..238 100 -> Plus
arm_2R 5857424..5857712 239..527 100 -> Plus
arm_2R 5857777..5857913 528..664 100 -> Plus
arm_2R 5857979..5858038 665..726 96   Plus

BO07702.pep Sequence

Translation from 16 to 742

> BO07702.pep
MADDWESAADSEVVIRPTAAASVNKWEGEDEDEDIKDSWEDEEEKKDEEK
PTKTEAPAKPKPNKALKAKLEQQALLEEEAEAKRLANLSPAEKLAEKLRL
QKIQEASDLKHAQEAFGVTSTCGGLDAFNPETKEEFKEFGATLSWKVGQF
RESEHFPQFVEDLVRSLCVNLSAADIKKVKMNVEILHSEKLKLEKANAKK
PAGKGKGKVTLRTENDDIDGYQKYGNDFTEDYDDFMASFLDH

BO07702.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:48:46
Subject Length Description Subject Range Query Range Score Percent Strand
Adam-PB 236 CG12131-PB 1..236 1..236 1220 100 Plus
Adam-PA 236 CG12131-PA 1..236 1..236 1220 100 Plus