Clone BO07719 Report

Search the DGRC for BO07719

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:77
Well:19
Vector:pDNR-Dual
Associated Gene/TranscriptEla-RA
Protein status:BO07719.pep: validated full length
Sequenced Size:1021

Clone Sequence Records

BO07719.3prime Sequence

874 bp (792 high quality bases) assembled on 2006-01-06

> BO07719.3prime
ATGGTCTAGAAAGCTTGCGTAGGCCGGCGAGTTGAAGGCACCGTTGTATC
CGCCCCCATATCCACTGCCATAGCCAAAGGCATTGTGATTGTTCAGCACT
CCAAATGGTCCCTTGTGGACGCCATCCTCCTTGTACTCGGTGTTCATCGA
GAAATGATGGTCCCAATGGCTCGGATCAGCGGGATTGTGAGCCGGATAGC
GATGATAGTTCATGCCGCTGGTGGCAGGAGCCTGACCAGCTGCTCCGGGC
ACTCCTGCCACTCCAGGTGCTCCCGGAACTCCAGCTACTCCAGGAACTCC
TGGTTGAGCCACAGCTCCGGGTAGCACTCCATAGGCGGGGAACTGGGCTG
GTTGAGGGTACGCTGGGTACTGTGGCAAGTATACTCCGGGGTAGGGATAG
CCAGGATAGGCACCAGTTCCCGGGAAGTAACCAGGTGCTCCTGCACCCAC
TGGCTGCTGGGGAGGAACTCCCACCGGATACTGAGCAGGAACTGCTCCAG
CAACAGGATAGCCAGGAGGAGAAACAGCACCTGCACTTTGGTAACCACCG
GATGATGAGGATCCTCCTGAAGAGCCTCCTGCAGCTGGGTACGGAACTGG
AGCCTGTTGTCCAGGAAAACCCGGAGGCGGATAAGCGGGAATCTGGTGAC
CTCCTGTAATTGTGAGTGCCGGATTTGGTGACTGGTTGCCAGGAAAAACA
ACGGAGTTCGTACTGGCCACTCGTACGCCAGAGCCACCCTGCTCATGGCC
ATGGGCATCGTCGATGGATCCAGTTGCGCCCGCATAACCCGATCCCAGCT
GACCAAGGCCAGGATAAAGTTGCGAATTGAGATTGGCCCGCTGGCGATGG
CGACTGCTGGTAATGCCTCCCGTC

BO07719.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:08:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG7021-PA 990 Ela-RA 132..987 874..19 4280 100 Minus
CG7021-PB 930 Ela-RB 293..927 653..19 3175 100 Minus
CG7021-PB 930 Ela-RB 132..293 874..713 810 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:19:00
Subject Length Description Subject Range Query Range Score Percent Strand
Ela-RC 2135 CG7021-RC 152..1014 874..12 4285 99.8 Minus
Ela-RA 1187 CG7021-RA 152..1014 874..12 4285 99.8 Minus
Ela-RB 1127 CG7021-RB 313..954 653..12 3180 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:18:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24866010..24866530 532..12 2575 99.6 Minus
3R 32079331 3R 24865501..24865846 874..529 1730 100 Minus
Blast to na_te.dros performed on 2015-02-13 13:18:59 has no hits.

BO07719.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:27:08 Download gff for BO07719.3prime
Subject Subject Range Query Range Percent Splice Strand
Ela-PA 132..990 16..874 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:12:47 Download gff for BO07719.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7021-PA 132..990 16..874 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:07:42 Download gff for BO07719.3prime
Subject Subject Range Query Range Percent Splice Strand
Ela-RA 152..1014 12..874 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:41:16 Download gff for BO07719.3prime
Subject Subject Range Query Range Percent Splice Strand
Ela-RA 152..1014 12..874 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:41:16 Download gff for BO07719.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 24865501..24865844 531..874 100 -> Minus
3R 24866012..24866530 12..530 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:07:42 Download gff for BO07719.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20691223..20691566 531..874 100 -> Minus
arm_3R 20691734..20692252 12..530 99   Minus

BO07719.5prime Sequence

921 bp (874 high quality bases) assembled on 2006-01-06

> BO07719.5prime
GAAGTTATCAGTCGACATGTTAAGCAGGAGGGTCATCGCATTCGCCGCTC
TGGCCCTCATCCAGATAGCCAGCGGTCAGGCCTCGCAATTCAGCAGGGAC
GAAAGTCAGGAGGATCAGAAGACGGAGTTTAACCTGGCCTCCACTCTGAC
GGGAGGCATTACCAGCAGTCGCCATCGCCAGCGGGCCAATCTCAATTCGC
AACTTTATCCTGGCCTTGGTCAGCTGGGATCGGGTTATGCGGGCGCAACT
GGATCCATCGACGATGCCCATGGCCATGAGCAGGGTGGCTCTGGCGTACG
AGTGGCCAGTACGAACTCCGTTGTTTTTCCTGGCAACCAGTCACCAAATC
CGGCACTCACAATTACAGGAGGTCACCAGATTCCCGCTTATCCGCCTCCG
GGTTTTCCTGGACAACAGGCTCCAGTTCCGTACCCAGCTGCAGGAGGCTC
TTCAGGAGGATCCTCATCATCCGGTGGTTACCAAAGTGCAGGTGCTGTTT
CTCCTCCTGGCTATCCTGTTGCTGGAGCAGTTCCTGCTCAGTATCCGGTG
GGAGTTCCTCCCCAGCAGCCAGTGGGTGCAGGAGCACCTGGTTACTTCCC
GGGAACTGGTGCCTATCCTGGCTATCCCTACCCCGGAGTATACTTGCCAC
AGTACCCAGCGTACCCTCAACCAGCCCAGTTCCCCGCCTATGGAGTGCTA
CCCGGAGCTGTGGCTCAACCAGGAGTTCCTGGAGTAGCTGGAGTTCCGGG
AGCACCTGGAGTGGCAGGAGTGCCCGGAGCAGCTGGTCAGGCTCCTGCCA
CCAGCGGCATGAACTATCATCGCTATCCGGCTCACAATCCCGCTGATCCG
AGCCATTGGGACCATCATTTCTCGATGAACACCGAGTACAAGGAGGATGG
CGTCCACAAAGGGACATTTGG

BO07719.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:09:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG7021-PA 990 Ela-RA 1..893 17..909 4465 100 Plus
CG7021-PB 930 Ela-RB 293..833 369..909 2705 100 Plus
CG7021-PB 930 Ela-RB 1..293 17..309 1465 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:34:51
Subject Length Description Subject Range Query Range Score Percent Strand
Ela-RC 2135 CG7021-RC 20..925 16..921 4485 99.8 Plus
Ela-RA 1187 CG7021-RA 20..925 16..921 4485 99.8 Plus
Ela-RB 1127 CG7021-RB 313..865 369..921 2720 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:34:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24865369..24865846 16..493 2390 100 Plus
3R 32079331 3R 24866010..24866441 490..921 2115 99.3 Plus
Blast to na_te.dros performed on 2015-02-11 17:34:46 has no hits.

BO07719.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:27:09 Download gff for BO07719.5prime
Subject Subject Range Query Range Percent Splice Strand
Ela-PA 1..905 17..921 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:12:48 Download gff for BO07719.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7021-PA 1..905 17..921 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:44:24 Download gff for BO07719.5prime
Subject Subject Range Query Range Percent Splice Strand
Ela-RA 14..925 10..921 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:11:29 Download gff for BO07719.5prime
Subject Subject Range Query Range Percent Splice Strand
Ela-RA 14..925 10..921 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:11:29 Download gff for BO07719.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 24865363..24865844 10..491 99 -> Plus
3R 24866012..24866441 492..921 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:44:24 Download gff for BO07719.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20691085..20691566 10..491 99 -> Plus
arm_3R 20691734..20692163 492..921 99   Plus

BO07719.complete Sequence

1021 bp (1021 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630905

> BO07719.complete
GAAGTTATCAGTCGACATGTTAAGCAGGAGGGTCATCGCATTCGCCGCTC
TGGCCCTCATCCAGATAGCCAGCGGTCAGGCCTCGCAATTCAGCAGGGAC
GAAAGTCAGGAGGATCAGAAGACGGAGTTTAACCTGGCCTCCACTCTGAC
GGGAGGCATTACCAGCAGTCGCCATCGCCAGCGGGCCAATCTCAATTCGC
AACTTTATCCTGGCCTTGGTCAGCTGGGATCGGGTTATGCGGGCGCAACT
GGATCCATCGACGATGCCCATGGCCATGAGCAGGGTGGCTCTGGCGTACG
AGTGGCCAGTACGAACTCCGTTGTTTTTCCTGGCAACCAGTCACCAAATC
CGGCACTCACAATTACAGGAGGTCACCAGATTCCCGCTTATCCGCCTCCG
GGTTTTCCTGGACAACAGGCTCCAGTTCCGTACCCAGCTGCAGGAGGCTC
TTCAGGAGGATCCTCATCATCCGGTGGTTACCAAAGTGCAGGTGCTGTTT
CTCCTCCTGGCTATCCTGTTGCTGGAGCAGTTCCTGCTCAGTATCCGGTG
GGAGTTCCTCCCCAGCAGCCAGTGGGTGCAGGAGCACCTGGTTACTTCCC
GGGAACTGGTGCCTATCCTGGCTATCCCTACCCCGGAGTATACTTGCCAC
AGTACCCAGCGTACCCTCAACCAGCCCAGTTCCCCGCCTATGGAGTGCTA
CCCGGAGCTGTGGCTCAACCAGGAGTTCCTGGAGTAGCTGGAGTTCCGGG
AGCACCTGGAGTGGCAGGAGTGCCCGGAGCAGCTGGTCAGGCTCCTGCCA
CCAGCGGCATGAACTATCATCGCTATCCGGCTCACAATCCCGCTGATCCG
AGCCATTGGGACCATCATTTCTCGATGAACACCGAGTACAAGGAGGATGG
CGTCCACAAGGGACCATTTGGAGTGCTGAACAATCACAATGCCTTTGGCT
ATGGCAGTGGATATGGGGGCGGATACAACGGTGCCTTCAACTCGCCGGCC
TACGCAAGCTTTCTAGACCAT

BO07719.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:07:54
Subject Length Description Subject Range Query Range Score Percent Strand
Ela-RC 990 CG7021-PC 1..987 17..1003 4935 100 Plus
Ela-RA 990 CG7021-PA 1..987 17..1003 4935 100 Plus
Ela-RB 930 CG7021-PB 293..927 369..1003 3175 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:07:55
Subject Length Description Subject Range Query Range Score Percent Strand
Ela-RC 2135 CG7021-RC 20..1014 16..1010 4945 99.8 Plus
Ela-RA 1187 CG7021-RA 20..1014 16..1010 4945 99.8 Plus
Ela-RB 1127 CG7021-RB 313..954 369..1010 3180 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:07:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24866010..24866530 490..1010 2575 99.6 Plus
3R 32079331 3R 24865369..24865846 16..493 2390 100 Plus
Blast to na_te.dros performed on 2014-11-27 14:07:53 has no hits.

BO07719.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:19:16 Download gff for BO07719.complete
Subject Subject Range Query Range Percent Splice Strand
Ela-RA 1..990 17..1006 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:41:58 Download gff for BO07719.complete
Subject Subject Range Query Range Percent Splice Strand
Ela-RA 13..1013 10..1010 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:34:27 Download gff for BO07719.complete
Subject Subject Range Query Range Percent Splice Strand
Ela-RA 26..1007 22..1005 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:19:16 Download gff for BO07719.complete
Subject Subject Range Query Range Percent Splice Strand
Ela-RA 13..1013 10..1010 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:04:03 Download gff for BO07719.complete
Subject Subject Range Query Range Percent Splice Strand
Ela-RA 26..1007 22..1005 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:04:03 Download gff for BO07719.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24865375..24865844 22..491 100 -> Plus
3R 24866012..24866523 492..1005 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:34:27 Download gff for BO07719.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20691097..20691566 22..491 100 -> Plus
arm_3R 20691734..20692245 492..1005 99   Plus

BO07719.pep Sequence

Translation from 16 to 1021

> BO07719.pep
MLSRRVIAFAALALIQIASGQASQFSRDESQEDQKTEFNLASTLTGGITS
SRHRQRANLNSQLYPGLGQLGSGYAGATGSIDDAHGHEQGGSGVRVASTN
SVVFPGNQSPNPALTITGGHQIPAYPPPGFPGQQAPVPYPAAGGSSGGSS
SSGGYQSAGAVSPPGYPVAGAVPAQYPVGVPPQQPVGAGAPGYFPGTGAY
PGYPYPGVYLPQYPAYPQPAQFPAYGVLPGAVAQPGVPGVAGVPGAPGVA
GVPGAAGQAPATSGMNYHRYPAHNPADPSHWDHHFSMNTEYKEDGVHKGP
FGVLNNHNAFGYGSGYGGGYNGAFNSPAYASFLDH

BO07719.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:33:16
Subject Length Description Subject Range Query Range Score Percent Strand
Ela-PC 329 CG7021-PC 1..329 1..329 1788 100 Plus
Ela-PA 329 CG7021-PA 1..329 1..329 1788 100 Plus
Ela-PB 309 CG7021-PB 1..309 1..329 1647 93.6 Plus
Cpr47Ef-PD 601 CG13214-PD 336..548 65..270 160 33.5 Plus
Sec24CD-PA 1193 CG10882-PA 150..360 79..278 158 31.4 Plus