Clone Sequence Records
BO07721.3prime Sequence
940 bp (884 high quality bases) assembled on 2006-01-06
> BO07721.3prime
ATGGTCTAGAAAGCTTGCCTCTGCAATGGGCGGATTCAGAACCAGCTCCC
AGGTATCTTCCTCCGTCGACTCGGAGCTCTTCATTTCATCGGAACGCAGG
GCGTGGCAACGATTGCACTTCGCTCGGTACCAGAAATTCATATTATAGCA
AATCTTGCACAGCCAGTCGTTCCTGTATGGCCGCCAACGACGAGGGGCAC
CGTCCTCTTCGCGTGATCCCGCCCAGGAACTTCCCTCGTTATTCTGAGGA
GCGACCACCTTGTCCGCCTGGCATCTGTTGCAGCTGGAACGCCAGACGAA
GTTGCTGTTCCGGCAGAGCATGCACACCCAATTGTCGATGGCTGGCTTCC
ATTTCATTGCCCGCTGGCGACGTTGGTGCTCCGGCGCATTAAGCTCTCGC
GGATAACTGTACCGGACACTGCCCCTCCGGGTGGATAGGTAGGCGGGCAG
AACGGTGATCACCTGTCCCATGAACTTGGCCCCACTCAGACAACTAATCG
CCGCCTGTGCAGAGAATGGACTCACATAGGTTATAGTGGCCTCACCCTTG
GAGCGCCCCGTTATCTTGTTCTTGTAGACGAAGATCTTCGGCTTGTTGGT
CGACTCGTCCATCTTGATAACGCCCACTTTGCCGAAGAACAGGATGATGT
CGTTCTTGGTCACATTGAGGCGCATGCCCAGCACGAAGACAGTTTCCGCC
TGGATCACGTACTGCTCCTGACCGATGCTTATATAGGGCCTATGCCGCGG
GAGCGCCAGGCGGGGCATGTAGTCGGCGGCGGTGCGCGGGAACACCATGT
AGGATGTGTTGCCACCCATGCAGGGTAACAGCGGCGGCCTCTGCTCGCCA
TTAACCTCCTCTGCAAGCTCCTCCATTTCCCCCATTCCCCTATATCTCCA
TTCAGCTCTTCCCGCTCCAGCGTCTCACATTGGGTCATCT
BO07721.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:09:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14718-PA | 1341 | CG14718-RA | 471..1338 | 886..19 | 4340 | 100 | Minus |
| CG14718-PA | 1341 | CG14718-RA | 416..471 | 940..885 | 255 | 98.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:27:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14718-RA | 2107 | CG14718-RA | 548..1470 | 940..19 | 4575 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:27:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11701161..11702083 | 940..19 | 4550 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-13 16:27:16 has no hits.
BO07721.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:27:12 Download gff for
BO07721.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-PA | 416..1341 | 18..940 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:12:53 Download gff for
BO07721.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-PA | 416..1341 | 18..940 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:12:20 Download gff for
BO07721.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 548..1470 | 19..940 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 19:01:17 Download gff for
BO07721.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 548..1470 | 19..940 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 19:01:17 Download gff for
BO07721.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11701161..11702083 | 19..940 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:12:20 Download gff for
BO07721.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7526883..7527805 | 19..940 | 99 | | Minus |
BO07721.5prime Sequence
931 bp (868 high quality bases) assembled on 2006-01-06
> BO07721.5prime
GAAGTTATCAGTCGACATGGATAGCACGTCAGCCAGCGTAGTGTATACGA
ATTCTTTTTACGCTCCAAATTACTCGGACACCCAGCAGCCACAGCCACAG
CTGCAGACTCAGCAACAGATGTTCCATGCCAACTACATCGTCGGAACCAC
ATTGGGTTCTGGATTGGGATTTAATTTTGCACCAGCCCCCATTCCCCAGG
CGAGTGCCGCTTCCGGTTTGAGTCCCAGAGGCATGTACAGTGATCTCTAC
CGCTACGAGGATGGAAGCGGCGATGCCAGCGGTTCCTTGCTTCTGGTCCA
AGAGGATGACCACTTCTGTGGTGCAGAGGCGGACCAGCAGTTGGTGGCCA
GCACGTCGTCCTCATGCCCGATGGCGAGTTCAGGCGAGTCCGTGAGCATT
GACACAGAGCAGGAGGCGGAACGGGATCTTCAGATGAACCAATGTGAGAC
GCTGGAGCGGGAAGAGCTGAATGGAGATATAGGGGAAATGGGGGAAATGG
AGGAGCTTGCAGAGGAGGTTAATGGCGAGCAGAGGCCGCCGCTGTTACCC
TGCATGGGTGGCAACACATCCTACATGGTGTTCCCGCGCACCGCCGCCGA
CTACATGCCCCGCCTGGCGCTCCCGCGGCATAGGCCCTATATAAGCATCG
GTCAGGAGCAGTACGTGATCCAGGCGGAAACTGTCTTCGTGCTGGGCATG
CGCCTCAATGTGACCAAGAACGACATCATCCTGTTCTTCGGCAAAGTGGG
CGTTATCAAGATGGACGAGTCGACCAACAAGCCGAAGATCTTCGTCTACA
AGAACAAGATAACGGGGCGCTCCAAGGGTGAGGCCACTATAACCTATGTG
AGTCCATTCTCTGCACAGGCGGCGATTAGTTGTCTGAGTGGGGCAAGTTC
ATGGGACAGGTGATCACCGTTCTGCCCGCCT
BO07721.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:09:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14718-PA | 1341 | CG14718-RA | 1..878 | 17..894 | 4390 | 100 | Plus |
| CG14718-PA | 1341 | CG14718-RA | 879..916 | 894..931 | 190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:19:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14718-RA | 2107 | CG14718-RA | 132..1048 | 16..931 | 4560 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:19:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11700745..11701661 | 16..931 | 4535 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-13 13:19:29 has no hits.
BO07721.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:27:13 Download gff for
BO07721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-PA | 1..916 | 17..931 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:12:54 Download gff for
BO07721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-PA | 1..916 | 17..931 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:07:47 Download gff for
BO07721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 128..1048 | 9..931 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:42:32 Download gff for
BO07721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 128..1048 | 9..931 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:42:32 Download gff for
BO07721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11700741..11701661 | 9..931 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:07:47 Download gff for
BO07721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7526463..7527383 | 9..931 | 99 | | Plus |
BO07721.complete Sequence
1372 bp (1372 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630907
> BO07721.complete
GAAGTTATCAGTCGACATGGATAGCACGTCAGCCAGCGTAGTGTATACGA
ATTCTTTTTACGCTCCAAATTACTCGGACACCCAGCAGCCACAGCCACAG
CTGCAGACTCAGCAACAGATGTTCCATGCCAACTACATCGTCGGAACCAC
ATTGGGTTCTGGATTGGGATTTAATTTTGCACCAGCCCCCATTCCCCAGG
CGAGTGCCGCTTCCGGTTTGAGTCCCAGAGGCATGTACAGTGATCTCTAC
CGCTACGAGGATGGAAGCGGCGATGCCAGCGGTTCCTTGCTTCTGGTCCA
AGAGGATGACCACTTCTGTGGTGCAGAGGCGGACCAGCAGTTGGTGGCCA
GCACGTCGTCCTCATGCCCGATGGCGAGTTCAGGCGAGTCCGTGAGCATT
GACACAGAGCAGGAGGCGGAACGGGATCTTCAGATGAACCAATGTGAGAC
GCTGGAGCGGGAAGAGCTGAATGGAGATATAGGGGAAATGGGGGAAATGG
AGGAGCTTGCAGAGGAGGTTAATGGCGAGCAGAGGCCGCCGCTGTTACCC
TGCATGGGTGGCAACACATCCTACATGGTGTTCCCGCGCACCGCCGCCGA
CTACATGCCCCGCCTGGCGCTCCCGCGGCATAGGCCCTATATAAGCATCG
GTCAGGAGCAGTACGTGATCCAGGCGGAAACTGTCTTCGTGCTGGGCATG
CGCCTCAATGTGACCAAGAACGACATCATCCTGTTCTTCGGCAAAGTGGG
CGTTATCAAGATGGACGAGTCGACCAACAAGCCGAAGATCTTCGTCTACA
AGAACAAGATAACGGGGCGCTCCAAGGGTGAGGCCACTATAACCTATGTG
AGTCCATTCTCTGCACAGGCGGCGATTAGTTGTCTGAGTGGGGCCAAGTT
CATGGGACAGGTGATCACCGTTCTGCCCGCCTACCTATCCACCCGGAGGG
GCAGTGTCCGGTACAGTTATCCGCGAGAGCTTAATGCGCCGGAGCACCAA
CGTCGCCAGCGGGCAATGAAATGGAAGCCAGCCATCGACAATTGGGTGTG
CATGCTCTGCCGGAACAGCAACTTCGTCTGGCGTTCCAGCTGCAACAGAT
GCCAGGCGGACAAGGTGGTCGCTCCTCAGAATAACGAGGGAAGTTCCTGG
GCGGGATCACGCGAAGAGGACGGTGCCCCTCGTCGTTGGCGGCCATACAG
GAACGACTGGCTGTGCAAGATTTGCTATAATATGAATTTCTGGTACCGAG
CGAAGTGCAATCGTTGCCACGCCCTGCGTTCCGATGAAATGAAGAGCTCC
GAGTCGACGGAGGAAGATACCTGGGAGCTGGTTCTGAATCCGCCCATTGC
AGAGGCAAGCTTTCTAGACCAT
BO07721.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:44:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14718-RA | 1341 | CG14718-PA | 1..1338 | 17..1354 | 6690 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14718-RA | 2107 | CG14718-RA | 132..1470 | 16..1354 | 6695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11700745..11702083 | 16..1354 | 6695 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:44:39 has no hits.
BO07721.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:14:58 Download gff for
BO07721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 1..1341 | 17..1355 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:36:39 Download gff for
BO07721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 128..1470 | 9..1354 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:08:38 Download gff for
BO07721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 133..1470 | 17..1356 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:14:58 Download gff for
BO07721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 128..1470 | 9..1354 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:26:24 Download gff for
BO07721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14718-RA | 133..1470 | 17..1356 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:26:24 Download gff for
BO07721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11700746..11702083 | 17..1356 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:08:38 Download gff for
BO07721.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7526468..7527805 | 17..1356 | 99 | | Plus |
BO07721.pep Sequence
Translation from 16 to 1372
> BO07721.pep
MDSTSASVVYTNSFYAPNYSDTQQPQPQLQTQQQMFHANYIVGTTLGSGL
GFNFAPAPIPQASAASGLSPRGMYSDLYRYEDGSGDASGSLLLVQEDDHF
CGAEADQQLVASTSSSCPMASSGESVSIDTEQEAERDLQMNQCETLEREE
LNGDIGEMGEMEELAEEVNGEQRPPLLPCMGGNTSYMVFPRTAADYMPRL
ALPRHRPYISIGQEQYVIQAETVFVLGMRLNVTKNDIILFFGKVGVIKMD
ESTNKPKIFVYKNKITGRSKGEATITYVSPFSAQAAISCLSGAKFMGQVI
TVLPAYLSTRRGSVRYSYPRELNAPEHQRRQRAMKWKPAIDNWVCMLCRN
SNFVWRSSCNRCQADKVVAPQNNEGSSWAGSREEDGAPRRWRPYRNDWLC
KICYNMNFWYRAKCNRCHALRSDEMKSSESTEEDTWELVLNPPIAEASFL
DH
BO07721.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:48:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14718-PA | 446 | CG14718-PA | 1..446 | 1..446 | 2374 | 100 | Plus |
| caz-PD | 355 | CG3606-PD | 67..157 | 212..302 | 213 | 48.4 | Plus |
| caz-PC | 384 | CG3606-PC | 96..186 | 212..302 | 213 | 48.4 | Plus |
| caz-PB | 399 | CG3606-PB | 111..201 | 212..302 | 213 | 48.4 | Plus |
