Clone BO07732 Report

Search the DGRC for BO07732

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:77
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG7251-RA
Protein status:BO07732.pep: validated full length
Sequenced Size:997

Clone Sequence Records

BO07732.3prime Sequence

903 bp (782 high quality bases) assembled on 2006-01-06

> BO07732.3prime
ATGGTCTAGAAAGCTTGCCATTTGCGTCTGTTTAACTGGACCCATCCATG
GAGTGGGATTCACATAGAGTTGAGATATGGTGCCTCGCAGTGAGTCCATG
CCCTGATTGAGGGGCACCGGCTTGGGCTTGGCGTCCACATTGCTCATCCA
CTTCGACCAGGCATCCTGGGCCAGTTGCCGGCGCTGTTCCTCTTTCAAGG
CCTTGGACAACATGGCGCGTCGCTTCTCCTCGCGCTGCGCCTGCTGCTGA
CTCTGCTTTTTTAGCCACCAGTCCTCAACGACCCTGCGAATCTCGTCCTT
GGACACCTTGCGAATGCGTCTGGGTGCCGTCGATGAGCTCGGCCCGGATC
CCAGCGATCCCAGTCCGGATAAGGACGATACGACGGGATTCTTGCGCAGT
GACTCCAACGGATTCTTGCGCAGAGCTATGCTGGCCTTCATGGCCGCGTC
TTGGATGTGGCTCTCCAGCTGCAAGTTTGCCGCCTGGCGGGCCTTGTCCT
TTAGCCACTGCTCGTAGCACATCCTGGCCAGCTGCTTGCGCTCCTCCGTC
CGCTGCTGCTTGAACTCCTGCTCCTCCTTGATTCGCCGCTGCTTCTCTAG
TAATTGCTGCTGCTTGGCTGAGTACCAGTTCTGATAGGCGGCCTCTGGTT
GGCGGTCCACCTTAATTCCCTTGCAGTGGCTGAGATAGTTGAGGGAGCTT
TCCTGCGAGCTGAGACACAGCGAGGGCACCAAGTTGCTCTGGATCTCCGA
TCGCTTGAGTCCGCCGAGCGACCAGTTGTCCGTAGATTGGGGCGAAGGAT
TTCACCGTCGTCCTTGAAGAAGTATGTGCGTGTGGTGTTCTGGGCGAGCG
AGCTCGGCGAAGACATGGAGTTTAGTGAGCCTCCGGATGACGGGGAGCGC
GCA

BO07732.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:09:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG7251-PA 966 CG7251-RA 179..963 803..19 3925 100 Minus
CG7251-PA 966 CG7251-RA 78..178 903..803 505 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:01:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG7251-RB 1243 CG7251-RB 201..1086 903..19 4405 99.9 Minus
CG7251-RA 1209 CG7251-RA 201..1086 903..19 4405 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:01:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5587272..5587915 19..662 3220 100 Plus
2L 23513712 2L 5587969..5588214 659..903 1180 99.6 Plus
Blast to na_te.dros performed 2015-02-11 22:01:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6803..6937 620..484 139 58.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6735..6818 614..531 123 60.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6777..6860 614..531 123 60.7 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6756..6818 614..552 117 65.1 Minus
Dvir\Uvir 6564 Dvir\Uvir VIRUVIR 6564bp 4505..4573 616..548 111 62.3 Minus

BO07732.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:27:32 Download gff for BO07732.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7251-PA 79..966 18..902 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:13:22 Download gff for BO07732.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7251-PA 79..966 18..902 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:46:21 Download gff for BO07732.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 202..1086 19..902 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:49:04 Download gff for BO07732.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 202..1086 19..902 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:49:04 Download gff for BO07732.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 5587272..5587913 19..660 100 <- Plus
2L 5587971..5588213 661..902 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:46:21 Download gff for BO07732.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5587272..5587913 19..660 100 <- Plus
arm_2L 5587971..5588213 661..902 99   Plus

BO07732.5prime Sequence

860 bp (801 high quality bases) assembled on 2006-01-06

> BO07732.5prime
GAAGTTATCAGTCGACATGGCATTTTGCGGCCACGTTACTTCCTCTGGAC
AAATAGTCCTGCGGGATGAGATCTTCAGCAGCAGGACTTGTATTGCGCGC
TCCCCGTCATCCGGAGGCTCACTAAACTCCATGTCTTCGCCGAGCTCGCT
CGCCCAGAACACCACACGCACATACTTCTTCAAGGACGACGGTGGAAATC
CTTCGCCCCAATCTACGGACAACTGGTCGCTCGGCGGACTCAAGCGATCG
GAGATCCAGAGCAACTTGGTGCCCTCGCTGTGTCTCAGCTCGCAGGAAAG
CTCCCTCAACTATCTCAGCCACTGCAAGGGAATTAAGGTGGACCGCCAAC
CAGAGGCCGCCTATCAGAACTGGTACTCAGCCAAGCAGCAGCAATTACTA
GAGAAGCAGCGGCGAATCAAGGAGGAGCAGGAGTTCAAGCAGCAGCGGAC
GGAGGAGCGCAAGCAGCTGGCCAGGATGTGCTACGAGCAGTGGCTAAAGG
ACAAGGCCCGCCAGGCGGCAAACTTGCAGCTGGAGAGCCACATCCAAGAC
GCGGCCATGAAGGCCAGCATAGCTCTGCGCAAGAATCCGTTGGAGTCACT
GCGCAAGAATCCCGTCGTATCGTCCTTATCCGGACTGGGATCGCTGGGAT
CCGGGCCGAGCTCATCGACGGCACCCAGACGCATTCGCAAGGTGTCCAAG
GACGAGATTCGCAGGGTCGTTGAGGACTGGTGGCTAAAAAAGCAGAGTCA
GCAGCAGGCGCAGCGCGAGGAGAAGCGACGCGCCATGTTGTCCAAGGCCT
TGAAAGAGGAACAGCGCCGGCAACTGGCCCAGGATGCCTGGTCGAAGTGG
ATGAGCAATG

BO07732.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:09:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG7251-PA 966 CG7251-RA 1..844 17..860 4195 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 23:46:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG7251-RB 1243 CG7251-RB 124..967 17..860 4205 99.9 Plus
CG7251-RA 1209 CG7251-RA 124..967 17..860 4205 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 23:46:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5587391..5587915 860..336 2625 100 Minus
2L 23513712 2L 5587969..5588291 339..17 1600 99.7 Minus
Blast to na_te.dros performed 2015-02-12 23:46:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6803..6937 378..514 139 58.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6735..6818 384..467 123 60.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6777..6860 384..467 123 60.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6756..6818 384..446 117 65.1 Plus
Dvir\Uvir 6564 Dvir\Uvir VIRUVIR 6564bp 4505..4573 382..450 111 62.3 Plus

BO07732.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:27:33 Download gff for BO07732.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7251-PA 1..844 17..860 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:13:23 Download gff for BO07732.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7251-PA 1..844 17..860 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:28:24 Download gff for BO07732.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 115..967 4..860 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:36:17 Download gff for BO07732.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 115..967 4..860 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:36:17 Download gff for BO07732.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 5587971..5588300 4..337 98   Minus
2L 5587391..5587913 338..860 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:28:24 Download gff for BO07732.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5587391..5587913 338..860 100 <- Minus
arm_2L 5587971..5588300 4..337 98   Minus

BO07732.complete Sequence

997 bp (997 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630910

> BO07732.complete
GAAGTTATCAGTCGACATGGCATTTTGCGGCCACGTTACTTCCTCTGGAC
AAATAGTCCTGCGGGATGAGATCTTCAGCAGCAGGACTTGTATTGCGCGC
TCCCCGTCATCCGGAGGCTCACTAAACTCCATGTCTTCGCCGAGCTCGCT
CGCCCAGAACACCACACGCACATACTTCTTCAAGGACGACGGTGGAAATC
CTTCGCCCCAATCTACGGACAACTGGTCGCTCGGCGGACTCAAGCGATCG
GAGATCCAGAGCAACTTGGTGCCCTCGCTGTGTCTCAGCTCGCAGGAAAG
CTCCCTCAACTATCTCAGCCACTGCAAGGGAATTAAGGTGGACCGCCAAC
CAGAGGCCGCCTATCAGAACTGGTACTCAGCCAAGCAGCAGCAATTACTA
GAGAAGCAGCGGCGAATCAAGGAGGAGCAGGAGTTCAAGCAGCAGCGGAC
GGAGGAGCGCAAGCAGCTGGCCAGGATGTGCTACGAGCAGTGGCTAAAGG
ACAAGGCCCGCCAGGCGGCAAACTTGCAGCTGGAGAGCCACATCCAAGAC
GCGGCCATGAAGGCCAGCATAGCTCTGCGCAAGAATCCGTTGGAGTCACT
GCGCAAGAATCCCGTCGTATCGTCCTTATCCGGACTGGGATCGCTGGGAT
CCGGGCCGAGCTCATCGACGGCACCCAGACGCATTCGCAAGGTGTCCAAG
GACGAGATTCGCAGGGTCGTTGAGGACTGGTGGCTAAAAAAGCAGAGTCA
GCAGCAGGCGCAGCGCGAGGAGAAGCGACGCGCCATGTTGTCCAAGGCCT
TGAAAGAGGAACAGCGCCGGCAACTGGCCCAGGATGCCTGGTCGAAGTGG
ATGAGCAATGTGGACGCCAAGCCCAAGCCGGTGCCCCTCAATCAGGGCAT
GGACTCACTGCGAGGCACCATATCTCAACTCTATGTGAATCCCACTCCAT
GGATGGGTCCAGTTAAACAGACGCAAATGGCAAGCTTTCTAGACCAT

BO07732.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:55:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG7251-RB 966 CG7251-PB 1..963 17..979 4800 99.9 Plus
CG7251-RA 966 CG7251-PA 1..963 17..979 4800 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:55:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG7251-RB 1243 CG7251-RB 124..1086 17..979 4800 99.9 Plus
CG7251-RA 1209 CG7251-RA 124..1086 17..979 4800 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:54:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5587272..5587915 979..336 3220 100 Minus
2L 23513712 2L 5587969..5588291 339..17 1600 99.7 Minus
Blast to na_te.dros performed 2014-11-28 00:55:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6803..6937 378..514 139 58.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6735..6818 384..467 123 60.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6777..6860 384..467 123 60.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6756..6818 384..446 117 65.1 Plus
Dvir\Uvir 6564 Dvir\Uvir VIRUVIR 6564bp 4505..4573 382..450 111 62.3 Plus

BO07732.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:15:00 Download gff for BO07732.complete
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 1..966 17..980 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:36:40 Download gff for BO07732.complete
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 115..1086 4..979 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:02:18 Download gff for BO07732.complete
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 124..1086 17..981 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:15:00 Download gff for BO07732.complete
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 115..1086 4..979 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:28:56 Download gff for BO07732.complete
Subject Subject Range Query Range Percent Splice Strand
CG7251-RA 124..1086 17..981 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:28:56 Download gff for BO07732.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5587270..5587913 338..981 99 <- Minus
2L 5587971..5588291 17..337 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:02:18 Download gff for BO07732.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5587270..5587913 338..981 99 <- Minus
arm_2L 5587971..5588291 17..337 99   Minus

BO07732.pep Sequence

Translation from 16 to 997

> BO07732.pep
MAFCGHVTSSGQIVLRDEIFSSRTCIARSPSSGGSLNSMSSPSSLAQNTT
RTYFFKDDGGNPSPQSTDNWSLGGLKRSEIQSNLVPSLCLSSQESSLNYL
SHCKGIKVDRQPEAAYQNWYSAKQQQLLEKQRRIKEEQEFKQQRTEERKQ
LARMCYEQWLKDKARQAANLQLESHIQDAAMKASIALRKNPLESLRKNPV
VSSLSGLGSLGSGPSSSTAPRRIRKVSKDEIRRVVEDWWLKKQSQQQAQR
EEKRRAMLSKALKEEQRRQLAQDAWSKWMSNVDAKPKPVPLNQGMDSLRG
TISQLYVNPTPWMGPVKQTQMASFLDH

BO07732.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:48:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG7251-PB 321 CG7251-PB 1..321 1..321 1655 100 Plus
CG7251-PA 321 CG7251-PA 1..321 1..321 1655 100 Plus
CG18266-PA 486 CG18266-PA 230..477 47..316 311 31.7 Plus
CG14011-PC 388 CG14011-PC 137..387 29..313 290 31.1 Plus
CG14011-PB 388 CG14011-PB 137..387 29..313 290 31.1 Plus