Clone Sequence Records
BO07738.3prime Sequence
886 bp (787 high quality bases) assembled on 2006-01-06
> BO07738.3prime
ATGGTCTAGAAAGCTTGCAATGCGATTGGCTCGAATGGTGCTTTCTATCC
AGTCCATGTAGCTGCTGACCCGGGTGTAAATTCCGGAAAACAACGCTGTG
CCACAGTGTTTCCGTCCAATGGAGACCACGCCGGCCAGATAGACATATCG
ATTGCCGCTCGCCGTGTTTGCCTCTACGGTCAGTGGTCCGCCGGAGTCGC
CACTGCAGGAATCAACGCCAATCTCGCCGCCGGCACACATCTGACTATCG
GCGAGCGTAATCTTGGTGTCCTTGTAAAACGCCTCCTGGCACTGATCCTG
CGGCTGGATGTGCAGCATCGCCTTTTGCTTGATCTTGCTGCTGCCGCTGG
ACTCGGTCTTGCCCCAGCCGGAAACATCGGCGGCTGAGCCGGCCAGCTGA
TTGGCATACCTGCCCCTCTGCGGTGGCAAACAGACGGGCTCCAGATTCTG
CATCTGCAGCCAGTTCACCGGACGTGATAAACGCAGCAGGGCTATATCGT
TTCTATAGTTCAATTCCGAGTACTGCGCATGCGGCAATATTCGATCGATG
GTCACCCGGATATGCGGCGGAGCACATTCGCGTACGCCATTCAAATCATT
CTCGCAATCCGGATCGGTGTCCCGATTCCATTCACCCAAAATGGCTGCGG
TGAGATTCCTGCCCATTGTGTGAATGCAGTGGGCGGCCGTTAAGAGCCAT
CTCTGGGCGATAAAGGATGCGCCGCACGCATAGTCCTTGCCACCGCTCAC
TGTCTCGTACTCCAGCAGAGTGGTCCACGGGAACTCGAAGAGTCCGGTAT
TATGACCACCGACCAAGCGAAACGAANAGGCGGAGCCGCAGTACGGATGC
TCGGGCAGTTGGTCGATACCGCTGGGTGGGCGTGGC
BO07738.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:09:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2045-PA | 1194 | Ser7-RA | 324..1191 | 886..19 | 4321 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:01:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ser7-RA | 1413 | CG2045-RA | 428..1295 | 886..19 | 4329 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:01:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9866085..9866952 | 886..19 | 4329 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 22:01:38 has no hits.
BO07738.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:27:43 Download gff for
BO07738.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ser7-PA | 324..1194 | 15..886 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:13:39 Download gff for
BO07738.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2045-PA | 324..1194 | 15..886 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:46:22 Download gff for
BO07738.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ser7-RA | 428..1304 | 8..886 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:49:34 Download gff for
BO07738.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ser7-RA | 428..1304 | 8..886 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:49:34 Download gff for
BO07738.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9866085..9866955 | 14..886 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:46:22 Download gff for
BO07738.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9760118..9760988 | 14..886 | 99 | -> | Minus |
BO07738.5prime Sequence
924 bp (805 high quality bases) assembled on 2006-01-06
> BO07738.5prime
GAAGTTATCAGTCGACATGCTCCTGCTGATACCGCTTTTCCTGACCCTTT
TGGGGGCTGAGGCCCAGCAATTTGGCAAAGCTATCATGCATTTTGGCAAC
TGCAACTCGGTGGAATTCGGTAGGGGCACCTGTATCGAGAAGAAGGACTG
CGACTTTTATGCCGTAGATAAACTTATGGAATTGGCCAGCAAACAACAGT
GCTTCTCCCGCCAGCGACCCGATCTGGTTTGCTGCCCCCGCGAGACGAAT
ATTATACCGCCATTGGCACCCAGGATCAGTAATGGGACCACTAATGCCAC
GAGCAGCACCACAACGCTGAAACTGCTGCCTCGCACCACGCCACGCCCAC
CCAGCGGTATCGACCAACTGCCCGAGCATCCGTACTGCGGCTCCGCCTTT
TCGTTTCGCTTGGTCGGTGGTCATAATACCGGACTCTTCGAGTTCCCGTG
GACCACTCTGCTGGAGTACGAGACAGTGAGCGGTGGCAAGGACTATGCGT
GCGGCGCATCCTTTATCGCCCAGAGATGGCTCTTAACGGCCGCCCACTGC
ATTCACACAATGGGCAGGAATCTCACCGCAGCCATTTTGGGTGAATGGAA
TCGGGACACCGATCCGGATTGCGAGAATGATTTGAATGGCGTACGCGAAT
GTGCTCCGCCGCATATCCGGGTGACCATCGATCGAATATTGCCGCATGCG
CAGTACTCGGAATTGAACTATAGAAACGATATAGCCCTGCTGCGTTTATC
ACGTCCGGTGAACTGGCTGCAGATGCAGAATCTGGAGCCCGTCTGTTTGC
CACCGCAGAGGGGCAGGTATGCCAATCAGCTGGCCGGCTCAGCCGCCGAT
GTTTTCGGCTGGGGCAAGACCGAGTCCAGCGGCAGCAGCAAGATCAAGCA
AAAGGCGATGCTGCACATCCAGCC
BO07738.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:09:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2045-PA | 1194 | Ser7-RA | 1..908 | 17..924 | 4515 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:43:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ser7-RA | 1413 | CG2045-RA | 105..1012 | 17..924 | 4525 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:43:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9865971..9866669 | 226..924 | 3480 | 99.9 | Plus |
X | 23542271 | X | 9865459..9865609 | 78..228 | 755 | 100 | Plus |
X | 23542271 | X | 9865337..9865397 | 17..77 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 19:43:27 has no hits.
BO07738.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:27:44 Download gff for
BO07738.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ser7-PA | 1..908 | 17..924 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:13:41 Download gff for
BO07738.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2045-PA | 1..908 | 17..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:10:33 Download gff for
BO07738.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ser7-RA | 98..1012 | 8..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:21:19 Download gff for
BO07738.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ser7-RA | 98..1012 | 8..924 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:21:19 Download gff for
BO07738.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9865330..9865397 | 8..77 | 94 | -> | Plus |
X | 9865459..9865607 | 78..226 | 100 | -> | Plus |
X | 9865972..9866669 | 227..924 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:10:33 Download gff for
BO07738.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9759363..9759430 | 8..77 | 94 | -> | Plus |
arm_X | 9759492..9759640 | 78..226 | 100 | -> | Plus |
arm_X | 9760005..9760702 | 227..924 | 99 | | Plus |
BO07738.complete Sequence
1225 bp (1225 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630914
> BO07738.complete
GAAGTTATCAGTCGACATGCTCCTGCTGATACCGCTTTTCCTGACCCTTT
TGGGGGCTGAGGCCCAGCAATTTGGCAAAGCTATCATGCATTTTGGCAAC
TGCAACTCGGTGGAATTCGGTAGGGGCACCTGTATCGAGAAGAAGGACTG
CGACTTTTATGCCGTAGATAAACTTATGGAATTGGCCAGCAAACAACAGT
GCTTCTCCCGCCAGCGACCCGATCTGGTTTGCTGCCCCCGCGAGACGAAT
ATTATACCGCCATTGGCACCCAGGATCAGTAATGGGACCACTAATGCCAC
GAGCAGCACCACAACGCTGAAACTGCTGCCTCGCACCACGCCACGCCCAC
CCAGCGGTATCGACCAACTGCCCGAGCATCCGTACTGCGGCTCCGCCTTT
TCGTTTCGCTTGGTCGGTGGTCATAATACCGGACTCTTCGAGTTCCCGTG
GACCACTCTGCTGGAGTACGAGACAGTGAGCGGTGGCAAGGACTATGCGT
GCGGCGCATCCTTTATCGCCCAGAGATGGCTCTTAACGGCCGCCCACTGC
ATTCACACAATGGGCAGGAATCTCACCGCAGCCATTTTGGGTGAATGGAA
TCGGGACACCGATCCGGATTGCGAGAATGATTTGAATGGCGTACGCGAAT
GTGCTCCGCCGCATATCCGGGTGACCATCGATCGAATATTGCCGCATGCG
CAGTACTCGGAATTGAACTATAGAAACGATATAGCCCTGCTGCGTTTATC
ACGTCCGGTGAACTGGCTGCAGATGCAGAATCTGGAGCCCGTCTGTTTGC
CACCGCAGAGGGGCAGGTATGCCAATCAGCTGGCCGGCTCAGCCGCCGAT
GTTTCCGGCTGGGGCAAGACCGAGTCCAGCGGCAGCAGCAAGATCAAGCA
AAAGGCGATGCTGCACATCCAGCCGCAGGATCAGTGCCAGGAGGCGTTTT
ACAAGGACACCAAGATTACGCTCGCCGATAGTCAGATGTGTGCCGGCGGC
GAGATTGGCGTTGATTCCTGCAGTGGCGACTCCGGCGGACCACTGACCGT
AGAGGCAAACACGGCGAGCGGCAATCGATATGTCTATCTGGCCGGCGTGG
TCTCCATTGGACGGAAACACTGTGGCACAGCGTTGTTTTCCGGAATTTAC
ACCCGGGTCAGCAGCTACATGGACTGGATAGAAAGCACCATTCGAGCCAA
TCGCATTGCAAGCTTTCTAGACCAT
BO07738.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:06:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ser7-RA | 1194 | CG2045-PA | 1..1191 | 17..1207 | 5955 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:06:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ser7-RA | 1413 | CG2045-RA | 105..1295 | 17..1207 | 5955 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:06:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9865971..9866952 | 226..1207 | 4910 | 100 | Plus |
X | 23542271 | X | 9865459..9865609 | 78..228 | 755 | 100 | Plus |
X | 23542271 | X | 9865337..9865397 | 17..77 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:06:08 has no hits.
BO07738.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:14:48 Download gff for
BO07738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ser7-RA | 1..1194 | 17..1211 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:36:27 Download gff for
BO07738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ser7-RA | 113..1319 | 8..1218 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:35:59 Download gff for
BO07738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ser7-RA | 105..1295 | 17..1209 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:14:48 Download gff for
BO07738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ser7-RA | 113..1319 | 8..1218 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:13:04 Download gff for
BO07738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ser7-RA | 105..1295 | 17..1209 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:13:04 Download gff for
BO07738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9865337..9865397 | 17..77 | 100 | -> | Plus |
X | 9865459..9865607 | 78..226 | 100 | -> | Plus |
X | 9865972..9866952 | 227..1209 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:35:59 Download gff for
BO07738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9759370..9759430 | 17..77 | 100 | -> | Plus |
arm_X | 9759492..9759640 | 78..226 | 100 | -> | Plus |
arm_X | 9760005..9760985 | 227..1209 | 99 | | Plus |
BO07738.pep Sequence
Translation from 16 to 1225
> BO07738.pep
MLLLIPLFLTLLGAEAQQFGKAIMHFGNCNSVEFGRGTCIEKKDCDFYAV
DKLMELASKQQCFSRQRPDLVCCPRETNIIPPLAPRISNGTTNATSSTTT
LKLLPRTTPRPPSGIDQLPEHPYCGSAFSFRLVGGHNTGLFEFPWTTLLE
YETVSGGKDYACGASFIAQRWLLTAAHCIHTMGRNLTAAILGEWNRDTDP
DCENDLNGVRECAPPHIRVTIDRILPHAQYSELNYRNDIALLRLSRPVNW
LQMQNLEPVCLPPQRGRYANQLAGSAADVSGWGKTESSGSSKIKQKAMLH
IQPQDQCQEAFYKDTKITLADSQMCAGGEIGVDSCSGDSGGPLTVEANTA
SGNRYVYLAGVVSIGRKHCGTALFSGIYTRVSSYMDWIESTIRANRIASF
LDH
BO07738.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:48:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ser7-PA | 397 | CG2045-PA | 1..397 | 1..397 | 2128 | 100 | Plus |
ea-PA | 392 | CG4920-PA | 6..392 | 4..394 | 643 | 37.3 | Plus |
MP1-PA | 390 | CG1102-PA | 26..390 | 26..394 | 621 | 38.6 | Plus |
MP1-PC | 399 | CG1102-PC | 26..399 | 26..394 | 616 | 38.5 | Plus |
SPE-PA | 400 | CG16705-PA | 9..398 | 3..392 | 608 | 36.3 | Plus |