Clone BO07746 Report

Search the DGRC for BO07746

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:77
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptCG7188-RA
Protein status:BO07746.pep: validated full length
Sequenced Size:769

Clone Sequence Records

BO07746.3prime Sequence

767 bp (766 high quality bases) assembled on 2006-01-06

> BO07746.3prime
ATGGTCTAGAAAGCTTGCTTTAGTTTTGTTCTGGCGGCGTTCATTCTGTT
TTCGCTCCTCCTTTTGCGTCAGTATAATCAGCAAACGGCGGAACATGCTG
AGTACATCGAAGAACAAATCTAAAGCGTGCTGCACCACATCTCGATTTCC
GTTTCGGCACTTCTCCACAATGTTCTGTGTATCGTAGACGATGAAGGCAG
CCATAACGAAAACGCCGACGTAAAGTTGAGTCACTTGCACGAAGTAGGAC
TTGAAGACCATGTTAAAGAGACTCAGCAGCGCCATGGTGTTGATGACGCT
AACCAGCATCCCACCCAGATAGAGGTACTTGCCCTGCTCGGCCAGAAGGG
CGGACAAGGAGAGCGAGATGAAGGTGACGAAGGTGCCCGTAAGGGCAGAC
AGGATTATTGCCGGATTTATGCTGCATATATAGCCGAGGAGCGGTCCGAG
CGTCTGGCCGGAGCAGAATCCGAAGGCGTAGAGCATGCCCAAACGTGTAT
AATAGTTCTTGCCGTCATCCTTGTAGAAGTGCAGACCCAAGACCAGGACT
AGAGTGGCCACCGCCGCCAGGACTCCAAGATCGAGAAAGTCACGCATCTG
AAGCATGGCTCCCATGGCCGTGGCAGCGGCAGTGCTGCCCAGGACCATGT
AAACCTTAGACAGGTGCTCGCGCACATAGGGCTCATAACGGTCACCGAGC
CCGTTCATGAAGGTCTGGAAACGGTCGTTGATGTAATTCGCAGTATCTGC
CATGTCGACTGATAACT

BO07746.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:09:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG7188-PA 738 CG7188-RA 1..735 753..19 3675 100 Minus
CG7188-PB 714 CG7188-RB 1..693 753..61 3465 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:29:34
Subject Length Description Subject Range Query Range Score Percent Strand
BI-1-RA 1107 CG7188-RA 179..913 753..19 3675 100 Minus
BI-1-RB 1247 CG7188-RB 179..871 753..61 3465 100 Minus
BI-1-RB 1247 CG7188-RB 1007..1053 65..19 220 97.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:29:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8308092..8308545 232..685 2270 100 Plus
3L 28110227 3L 8307793..8307965 60..232 865 100 Plus
3L 28110227 3L 8308696..8308763 686..753 340 100 Plus
3L 28110227 3L 8307339..8307382 19..62 220 100 Plus
Blast to na_te.dros performed on 2015-02-04 20:29:31 has no hits.

BO07746.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:27:58 Download gff for BO07746.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7188-PA 1..738 15..753 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:14:02 Download gff for BO07746.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7188-PA 1..738 15..753 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:26:02 Download gff for BO07746.3prime
Subject Subject Range Query Range Percent Splice Strand
BI-1-RA 171..923 7..760 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:50:21 Download gff for BO07746.3prime
Subject Subject Range Query Range Percent Splice Strand
BI-1-RA 171..923 7..760 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:50:21 Download gff for BO07746.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 8307329..8307380 7..60 92 <- Plus
3L 8307794..8307964 61..231 100 <- Plus
3L 8308092..8308545 232..685 100 <- Plus
3L 8308696..8308771 686..760 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:26:02 Download gff for BO07746.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8301192..8301645 232..685 100 <- Plus
arm_3L 8301796..8301871 686..760 96   Plus
arm_3L 8300429..8300480 7..60 92 <- Plus
arm_3L 8300894..8301064 61..231 100 <- Plus

BO07746.5prime Sequence

767 bp (766 high quality bases) assembled on 2006-01-06

> BO07746.5prime
GAAGTTATCAGTCGACATGGCAGATACTGCGAATTACATCAACGACCGTT
TCCAGACCTTCATGAACGGGCTCGGTGACCGTTATGAGCCCTATGTGCGC
GAGCACCTGTCTAAGGTTTACATGGTCCTGGGCAGCACTGCCGCTGCCAC
GGCCATGGGAGCCATGCTTCAGATGCGTGACTTTCTCGATCTTGGAGTCC
TGGCGGCGGTGGCCACTCTAGTCCTGGTCTTGGGTCTGCACTTCTACAAG
GATGACGGCAAGAACTATTATACACGTTTGGGCATGCTCTACGCCTTCGG
ATTCTGCTCCGGCCAGACGCTCGGACCGCTCCTCGGCTATATATGCAGCA
TAAATCCGGCAATAATCCTGTCTGCCCTTACGGGCACCTTCGTCACCTTC
ATCTCGCTCTCCTTGTCCGCCCTTCTGGCCGAGCAGGGCAAGTACCTCTA
TCTGGGTGGGATGCTGGTTAGCGTCATCAACACCATGGCGCTGCTGAGTC
TCTTTAACATGGTCTTCAAGTCCTACTTCGTGCAAGTGACTCAACTTTAC
GTCGGCGTTTTCGTTATGGCTGCCTTCATCGTCTACGATACACAGAACAT
TGTGGAGAAGTGCCGAAACGGAAATCGAGATGTGGTGCAGCACGCTTTAG
ATTTGTTCTTCGATGTACTCAGCATGTTCCGCCGTTTGCTGATTATACTG
ACGCAAAAGGAGGAGCGAAAACAGAATGAACGCCGCCAGAACAAAACTAA
AGCAAGCTTTCTAGACC

BO07746.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:09:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG7188-PA 738 CG7188-RA 1..735 17..751 3675 100 Plus
CG7188-PB 714 CG7188-RB 1..693 17..709 3465 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:20:57
Subject Length Description Subject Range Query Range Score Percent Strand
BI-1-RA 1107 CG7188-RA 179..913 17..751 3675 100 Plus
BI-1-RB 1247 CG7188-RB 179..871 17..709 3465 100 Plus
BI-1-RB 1247 CG7188-RB 1007..1053 705..751 220 97.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:20:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8308092..8308545 538..85 2270 100 Minus
3L 28110227 3L 8307793..8307965 710..538 865 100 Minus
3L 28110227 3L 8308696..8308763 84..17 340 100 Minus
3L 28110227 3L 8307339..8307382 751..708 220 100 Minus
Blast to na_te.dros performed on 2015-02-13 13:20:56 has no hits.

BO07746.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:27:59 Download gff for BO07746.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7188-PA 1..738 17..755 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:14:03 Download gff for BO07746.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7188-PA 1..738 17..755 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:07:59 Download gff for BO07746.5prime
Subject Subject Range Query Range Percent Splice Strand
BI-1-RA 171..923 10..763 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:47:50 Download gff for BO07746.5prime
Subject Subject Range Query Range Percent Splice Strand
BI-1-RA 171..923 10..763 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:47:50 Download gff for BO07746.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8307329..8307380 710..763 92 <- Minus
3L 8307794..8307964 539..709 100 <- Minus
3L 8308092..8308545 85..538 100 <- Minus
3L 8308696..8308771 10..84 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:07:59 Download gff for BO07746.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8300429..8300480 710..763 92 <- Minus
arm_3L 8300894..8301064 539..709 100 <- Minus
arm_3L 8301192..8301645 85..538 100 <- Minus
arm_3L 8301796..8301871 10..84 96   Minus

BO07746.complete Sequence

769 bp (769 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ638653

> BO07746.complete
GAAGTTATCAGTCGACATGGCAGATACTGCGAATTACATCAACGACCGTT
TCCAGACCTTCATGAACGGGCTCGGTGACCGTTATGAGCCCTATGTGCGC
GAGCACCTGTCTAAGGTTTACATGGTCCTGGGCAGCACTGCCGCTGCCAC
GGCCATGGGAGCCATGCTTCAGATGCGTGACTTTCTCGATCTTGGAGTCC
TGGCGGCGGTGGCCACTCTAGTCCTGGTCTTGGGTCTGCACTTCTACAAG
GATGACGGCAAGAACTATTATACACGTTTGGGCATGCTCTACGCCTTCGG
ATTCTGCTCCGGCCAGACGCTCGGACCGCTCCTCGGCTATATATGCAGCA
TAAATCCGGCAATAATCCTGTCTGCCCTTACGGGCACCTTCGTCACCTTC
ATCTCGCTCTCCTTGTCCGCCCTTCTGGCCGAGCAGGGCAAGTACCTCTA
TCTGGGTGGGATGCTGGTTAGCGTCATCAACACCATGGCGCTGCTGAGTC
TCTTTAACATGGTCTTCAAGTCCTACTTCGTGCAAGTGACTCAACTTTAC
GTCGGCGTTTTCGTTATGGCTGCCTTCATCGTCTACGATACACAGAACAT
TGTGGAGAAGTGCCGAAACGGAAATCGAGATGTGGTGCAGCACGCTTTAG
ATTTGTTCTTCGATGTACTCAGCATGTTCCGCCGTTTGCTGATTATACTG
ACGCAAAAGGAGGAGCGAAAACAGAATGAACGCCGCCAGAACAAAACTAA
AGCAAGCTTTCTAGACCAT

BO07746.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:03:04
Subject Length Description Subject Range Query Range Score Percent Strand
BI-1-RA 738 CG7188-PA 1..735 17..751 3675 100 Plus
BI-1-RB 714 CG7188-PB 1..693 17..709 3465 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:03:05
Subject Length Description Subject Range Query Range Score Percent Strand
BI-1-RA 1107 CG7188-RA 179..913 17..751 3675 100 Plus
BI-1-RB 1247 CG7188-RB 179..871 17..709 3465 100 Plus
BI-1-RB 1247 CG7188-RB 1007..1053 705..751 220 97.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 17:03:02
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8308092..8308545 538..85 2270 100 Minus
3L 28110227 3L 8307793..8307965 710..538 865 100 Minus
3L 28110227 3L 8308696..8308763 84..17 340 100 Minus
3L 28110227 3L 8307339..8307382 751..708 220 100 Minus
Blast to na_te.dros performed on 2014-11-27 17:03:03 has no hits.

BO07746.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:14:49 Download gff for BO07746.complete
Subject Subject Range Query Range Percent Splice Strand
CG7188-RA 1..738 17..755 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:04:45 Download gff for BO07746.complete
Subject Subject Range Query Range Percent Splice Strand
CG7188-RA 192..944 10..763 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:40 Download gff for BO07746.complete
Subject Subject Range Query Range Percent Splice Strand
BI-1-RA 179..913 17..753 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:14:50 Download gff for BO07746.complete
Subject Subject Range Query Range Percent Splice Strand
CG7188-RA 192..944 10..763 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:33:22 Download gff for BO07746.complete
Subject Subject Range Query Range Percent Splice Strand
BI-1-RA 179..913 17..753 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:33:22 Download gff for BO07746.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8307794..8307964 539..709 100 <- Minus
3L 8307337..8307380 710..753 95 <- Minus
3L 8308092..8308545 85..538 100 <- Minus
3L 8308696..8308763 17..84 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:40 Download gff for BO07746.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8300437..8300480 710..753 95 <- Minus
arm_3L 8300894..8301064 539..709 100 <- Minus
arm_3L 8301192..8301645 85..538 100 <- Minus
arm_3L 8301796..8301863 17..84 100   Minus

BO07746.pep Sequence

Translation from 16 to 769

> BO07746.pep
MADTANYINDRFQTFMNGLGDRYEPYVREHLSKVYMVLGSTAAATAMGAM
LQMRDFLDLGVLAAVATLVLVLGLHFYKDDGKNYYTRLGMLYAFGFCSGQ
TLGPLLGYICSINPAIILSALTGTFVTFISLSLSALLAEQGKYLYLGGML
VSVINTMALLSLFNMVFKSYFVQVTQLYVGVFVMAAFIVYDTQNIVEKCR
NGNRDVVQHALDLFFDVLSMFRRLLIILTQKEERKQNERRQNKTKASFLD
H

BO07746.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:48:53
Subject Length Description Subject Range Query Range Score Percent Strand
BI-1-PA 245 CG7188-PA 1..245 1..245 1239 100 Plus
BI-1-PB 237 CG7188-PB 1..231 1..231 1167 100 Plus
CG1287-PA 365 CG1287-PA 139..364 26..235 166 27.3 Plus