Clone BO07749 Report

Search the DGRC for BO07749

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:77
Well:49
Vector:pDNR-Dual
Associated Gene/Transcriptslmo-RA
Protein status:BO07749.pep: validated full length
Sequenced Size:679

Clone Sequence Records

BO07749.3prime Sequence

677 bp (676 high quality bases) assembled on 2006-01-06

> BO07749.3prime
ATGGTCTAGAAAGCTTGCCGTAATGTGCATCGCCTTCGCCGCCTTGGCGG
CCTGCGCACTGATCTCGTCCATGCTCTTCCGCGCGCTCTCCGTCACCTCG
TCGATGGAGCGCCGTGTGTTGTGCAGAAGTTCGTCGGTGCCGCGAGCGAT
GCCCTTGACCTCCGTGTTGATCAGCCCGATCACCCACTCCAGGCCCTGGC
GTCCCTTGCCGGCATTTGTGCTAATGGTCGAGGTGAGCAGGTCCTCCATG
TAGTGGGACAGCGGCACACCAAAGACGGTCACGGTGGCCTCCTGCTTGAG
CAGCGTCTTGCTGGCATCCGACGGATGCGGCTCATAGTAGAGCACCTCGT
CCACGCTGATGTTGCGGCAGAAGGTGAGGTTGTTTGTCTTCAGCACCATC
TGTTTGCGCTCCGGGTCCACCGTGGAGCGTTCGCTGGCGAAACAAGTTTT
GGCCGTGCCGATCAGCGCGTGCGTCCACTTGGGGAAGTACCACTTGGACT
GCACCAGGCGATGCGTGTGCAGGACGCCGTCCACCACACGGCGCTCGACC
ACGTCCGTGCCAATGATGGAGGGCGTCATCGGATTGGGGTACTTGCGCCA
CGCCGCCTGCGTGACCGTCTCCCACGGGTGGTTGAATATGTGCTCCGATG
TCCAGATTTTCATGTCGACTGATAACT

BO07749.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:09:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG9131-PA 648 slmo-RA 1..645 663..19 3225 100 Minus
CG9131-PB 648 slmo-RB 1..645 663..19 3225 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:38:08
Subject Length Description Subject Range Query Range Score Percent Strand
slmo-RE 1419 CG9131-RE 235..879 663..19 3225 100 Minus
slmo-RD 2056 CG9131-RD 1007..1651 663..19 3225 100 Minus
slmo-RC 1703 CG9131-RC 654..1298 663..19 3225 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:38:00
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6047056..6047700 19..663 3225 100 Plus
Blast to na_te.dros performed on 2015-02-11 17:38:04 has no hits.

BO07749.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:28:03 Download gff for BO07749.3prime
Subject Subject Range Query Range Percent Splice Strand
slmo-PA 1..648 18..663 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:14:10 Download gff for BO07749.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9131-PB 1..648 18..663 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:44:38 Download gff for BO07749.3prime
Subject Subject Range Query Range Percent Splice Strand
slmo-RC 650..1298 19..671 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:20:33 Download gff for BO07749.3prime
Subject Subject Range Query Range Percent Splice Strand
slmo-RC 650..1298 19..671 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:20:33 Download gff for BO07749.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 6047056..6047704 19..671 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:44:38 Download gff for BO07749.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6047056..6047704 19..671 99   Plus

BO07749.5prime Sequence

677 bp (676 high quality bases) assembled on 2006-01-06

> BO07749.5prime
GAAGTTATCAGTCGACATGAAAATCTGGACATCGGAGCACATATTCAACC
ACCCGTGGGAGACGGTCACGCAGGCGGCGTGGCGCAAGTACCCCAATCCG
ATGACGCCCTCCATCATTGGCACGGACGTGGTCGAGCGCCGTGTGGTGGA
CGGCGTCCTGCACACGCATCGCCTGGTGCAGTCCAAGTGGTACTTCCCCA
AGTGGACGCACGCGCTGATCGGCACGGCCAAAACTTGTTTCGCCAGCGAA
CGCTCCACGGTGGACCCGGAGCGCAAACAGATGGTGCTGAAGACAAACAA
CCTCACCTTCTGCCGCAACATCAGCGTGGACGAGGTGCTCTACTATGAGC
CGCATCCGTCGGATGCCAGCAAGACGCTGCTCAAGCAGGAGGCCACCGTG
ACCGTCTTTGGTGTGCCGCTGTCCCACTACATGGAGGACCTGCTCACCTC
GACCATTAGCACAAATGCCGGCAAGGGACGCCAGGGCCTGGAGTGGGTGA
TCGGGCTGATCAACACGGAGGTCAAGGGCATCGCTCGCGGCACCGACGAA
CTTCTGCACAACACACGGCGCTCCATCGACGAGGTGACGGAGAGCGCGCG
GAAGAGCATGGACGAGATCAGTGCGCAGGCCGCCAAGGCGGCGAAGGCGA
TGCACATTACGGCAAGCTTTCTAGACC

BO07749.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:09:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG9131-PA 648 slmo-RA 1..645 17..661 3225 100 Plus
CG9131-PB 648 slmo-RB 1..645 17..661 3225 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:57:05
Subject Length Description Subject Range Query Range Score Percent Strand
slmo-RE 1419 CG9131-RE 235..879 17..661 3225 100 Plus
slmo-RD 2056 CG9131-RD 1007..1651 17..661 3225 100 Plus
slmo-RC 1703 CG9131-RC 654..1298 17..661 3225 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:56:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6047056..6047700 661..17 3225 100 Minus
Blast to na_te.dros performed on 2015-02-13 01:57:02 has no hits.

BO07749.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:28:04 Download gff for BO07749.5prime
Subject Subject Range Query Range Percent Splice Strand
slmo-PA 1..648 17..662 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:14:11 Download gff for BO07749.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9131-PB 1..648 17..662 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:33:35 Download gff for BO07749.5prime
Subject Subject Range Query Range Percent Splice Strand
slmo-RC 650..1298 9..661 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:30:12 Download gff for BO07749.5prime
Subject Subject Range Query Range Percent Splice Strand
slmo-RC 650..1298 9..661 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:30:12 Download gff for BO07749.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 6047056..6047704 9..661 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:33:35 Download gff for BO07749.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6047056..6047704 9..661 99   Minus

BO07749.complete Sequence

679 bp (679 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630919

> BO07749.complete
GAAGTTATCAGTCGACATGAAAATCTGGACATCGGAGCACATATTCAACC
ACCCGTGGGAGACGGTCACGCAGGCGGCGTGGCGCAAGTACCCCAATCCG
ATGACGCCCTCCATCATTGGCACGGACGTGGTCGAGCGCCGTGTGGTGGA
CGGCGTCCTGCACACGCATCGCCTGGTGCAGTCCAAGTGGTACTTCCCCA
AGTGGACGCACGCGCTGATCGGCACGGCCAAAACTTGTTTCGCCAGCGAA
CGCTCCACGGTGGACCCGGAGCGCAAACAGATGGTGCTGAAGACAAACAA
CCTCACCTTCTGCCGCAACATCAGCGTGGACGAGGTGCTCTACTATGAGC
CGCATCCGTCGGATGCCAGCAAGACGCTGCTCAAGCAGGAGGCCACCGTG
ACCGTCTTTGGTGTGCCGCTGTCCCACTACATGGAGGACCTGCTCACCTC
GACCATTAGCACAAATGCCGGCAAGGGACGCCAGGGCCTGGAGTGGGTGA
TCGGGCTGATCAACACGGAGGTCAAGGGCATCGCTCGCGGCACCGACGAA
CTTCTGCACAACACACGGCGCTCCATCGACGAGGTGACGGAGAGCGCGCG
GAAGAGCATGGACGAGATCAGTGCGCAGGCCGCCAAGGCGGCGAAGGCGA
TGCACATTACGGCAAGCTTTCTAGACCAT

BO07749.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:16:26
Subject Length Description Subject Range Query Range Score Percent Strand
slmo-RE 648 CG9131-PE 1..645 17..661 3225 100 Plus
slmo-RD 648 CG9131-PD 1..645 17..661 3225 100 Plus
slmo-RC 648 CG9131-PC 1..645 17..661 3225 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:27
Subject Length Description Subject Range Query Range Score Percent Strand
slmo-RE 1419 CG9131-RE 235..879 17..661 3225 100 Plus
slmo-RD 2056 CG9131-RD 1007..1651 17..661 3225 100 Plus
slmo-RC 1703 CG9131-RC 654..1298 17..661 3225 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6047056..6047700 661..17 3225 100 Minus
Blast to na_te.dros performed on 2014-11-27 08:16:25 has no hits.

BO07749.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:53:31 Download gff for BO07749.complete
Subject Subject Range Query Range Percent Splice Strand
slmo-RC 1..648 17..662 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:25:41 Download gff for BO07749.complete
Subject Subject Range Query Range Percent Splice Strand
slmo-RC 449..1097 9..661 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:56:57 Download gff for BO07749.complete
Subject Subject Range Query Range Percent Splice Strand
slmo-RC 654..1298 17..663 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:53:31 Download gff for BO07749.complete
Subject Subject Range Query Range Percent Splice Strand
slmo-RC 449..1097 9..661 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:14:34 Download gff for BO07749.complete
Subject Subject Range Query Range Percent Splice Strand
slmo-RC 654..1298 17..663 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:14:34 Download gff for BO07749.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6047054..6047700 17..663 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:56:57 Download gff for BO07749.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6047054..6047700 17..663 99   Minus

BO07749.pep Sequence

Translation from 16 to 679

> BO07749.pep
MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHT
HRLVQSKWYFPKWTHALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCR
NISVDEVLYYEPHPSDASKTLLKQEATVTVFGVPLSHYMEDLLTSTISTN
AGKGRQGLEWVIGLINTEVKGIARGTDELLHNTRRSIDEVTESARKSMDE
ISAQAAKAAKAMHITASFLDH

BO07749.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:22:18
Subject Length Description Subject Range Query Range Score Percent Strand
slmo-PE 215 CG9131-PE 1..215 1..215 1130 100 Plus
slmo-PD 215 CG9131-PD 1..215 1..215 1130 100 Plus
slmo-PC 215 CG9131-PC 1..215 1..215 1130 100 Plus
slmo-PB 215 CG9131-PB 1..215 1..215 1130 100 Plus
slmo-PA 215 CG9131-PA 1..215 1..215 1130 100 Plus