Clone Sequence Records
BO07749.3prime Sequence
677 bp (676 high quality bases) assembled on 2006-01-06
> BO07749.3prime
ATGGTCTAGAAAGCTTGCCGTAATGTGCATCGCCTTCGCCGCCTTGGCGG
CCTGCGCACTGATCTCGTCCATGCTCTTCCGCGCGCTCTCCGTCACCTCG
TCGATGGAGCGCCGTGTGTTGTGCAGAAGTTCGTCGGTGCCGCGAGCGAT
GCCCTTGACCTCCGTGTTGATCAGCCCGATCACCCACTCCAGGCCCTGGC
GTCCCTTGCCGGCATTTGTGCTAATGGTCGAGGTGAGCAGGTCCTCCATG
TAGTGGGACAGCGGCACACCAAAGACGGTCACGGTGGCCTCCTGCTTGAG
CAGCGTCTTGCTGGCATCCGACGGATGCGGCTCATAGTAGAGCACCTCGT
CCACGCTGATGTTGCGGCAGAAGGTGAGGTTGTTTGTCTTCAGCACCATC
TGTTTGCGCTCCGGGTCCACCGTGGAGCGTTCGCTGGCGAAACAAGTTTT
GGCCGTGCCGATCAGCGCGTGCGTCCACTTGGGGAAGTACCACTTGGACT
GCACCAGGCGATGCGTGTGCAGGACGCCGTCCACCACACGGCGCTCGACC
ACGTCCGTGCCAATGATGGAGGGCGTCATCGGATTGGGGTACTTGCGCCA
CGCCGCCTGCGTGACCGTCTCCCACGGGTGGTTGAATATGTGCTCCGATG
TCCAGATTTTCATGTCGACTGATAACT
BO07749.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:09:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9131-PA | 648 | slmo-RA | 1..645 | 663..19 | 3225 | 100 | Minus |
CG9131-PB | 648 | slmo-RB | 1..645 | 663..19 | 3225 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:38:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slmo-RE | 1419 | CG9131-RE | 235..879 | 663..19 | 3225 | 100 | Minus |
slmo-RD | 2056 | CG9131-RD | 1007..1651 | 663..19 | 3225 | 100 | Minus |
slmo-RC | 1703 | CG9131-RC | 654..1298 | 663..19 | 3225 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:38:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6047056..6047700 | 19..663 | 3225 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-11 17:38:04 has no hits.
BO07749.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:28:03 Download gff for
BO07749.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-PA | 1..648 | 18..663 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:14:10 Download gff for
BO07749.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9131-PB | 1..648 | 18..663 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:44:38 Download gff for
BO07749.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 650..1298 | 19..671 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:20:33 Download gff for
BO07749.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 650..1298 | 19..671 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:20:33 Download gff for
BO07749.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6047056..6047704 | 19..671 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:44:38 Download gff for
BO07749.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6047056..6047704 | 19..671 | 99 | | Plus |
BO07749.5prime Sequence
677 bp (676 high quality bases) assembled on 2006-01-06
> BO07749.5prime
GAAGTTATCAGTCGACATGAAAATCTGGACATCGGAGCACATATTCAACC
ACCCGTGGGAGACGGTCACGCAGGCGGCGTGGCGCAAGTACCCCAATCCG
ATGACGCCCTCCATCATTGGCACGGACGTGGTCGAGCGCCGTGTGGTGGA
CGGCGTCCTGCACACGCATCGCCTGGTGCAGTCCAAGTGGTACTTCCCCA
AGTGGACGCACGCGCTGATCGGCACGGCCAAAACTTGTTTCGCCAGCGAA
CGCTCCACGGTGGACCCGGAGCGCAAACAGATGGTGCTGAAGACAAACAA
CCTCACCTTCTGCCGCAACATCAGCGTGGACGAGGTGCTCTACTATGAGC
CGCATCCGTCGGATGCCAGCAAGACGCTGCTCAAGCAGGAGGCCACCGTG
ACCGTCTTTGGTGTGCCGCTGTCCCACTACATGGAGGACCTGCTCACCTC
GACCATTAGCACAAATGCCGGCAAGGGACGCCAGGGCCTGGAGTGGGTGA
TCGGGCTGATCAACACGGAGGTCAAGGGCATCGCTCGCGGCACCGACGAA
CTTCTGCACAACACACGGCGCTCCATCGACGAGGTGACGGAGAGCGCGCG
GAAGAGCATGGACGAGATCAGTGCGCAGGCCGCCAAGGCGGCGAAGGCGA
TGCACATTACGGCAAGCTTTCTAGACC
BO07749.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:09:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9131-PA | 648 | slmo-RA | 1..645 | 17..661 | 3225 | 100 | Plus |
CG9131-PB | 648 | slmo-RB | 1..645 | 17..661 | 3225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 01:57:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slmo-RE | 1419 | CG9131-RE | 235..879 | 17..661 | 3225 | 100 | Plus |
slmo-RD | 2056 | CG9131-RD | 1007..1651 | 17..661 | 3225 | 100 | Plus |
slmo-RC | 1703 | CG9131-RC | 654..1298 | 17..661 | 3225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 01:56:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6047056..6047700 | 661..17 | 3225 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-13 01:57:02 has no hits.
BO07749.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:28:04 Download gff for
BO07749.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-PA | 1..648 | 17..662 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:14:11 Download gff for
BO07749.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9131-PB | 1..648 | 17..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 06:33:35 Download gff for
BO07749.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 650..1298 | 9..661 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 03:30:12 Download gff for
BO07749.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 650..1298 | 9..661 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 03:30:12 Download gff for
BO07749.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6047056..6047704 | 9..661 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 06:33:35 Download gff for
BO07749.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6047056..6047704 | 9..661 | 99 | | Minus |
BO07749.complete Sequence
679 bp (679 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630919
> BO07749.complete
GAAGTTATCAGTCGACATGAAAATCTGGACATCGGAGCACATATTCAACC
ACCCGTGGGAGACGGTCACGCAGGCGGCGTGGCGCAAGTACCCCAATCCG
ATGACGCCCTCCATCATTGGCACGGACGTGGTCGAGCGCCGTGTGGTGGA
CGGCGTCCTGCACACGCATCGCCTGGTGCAGTCCAAGTGGTACTTCCCCA
AGTGGACGCACGCGCTGATCGGCACGGCCAAAACTTGTTTCGCCAGCGAA
CGCTCCACGGTGGACCCGGAGCGCAAACAGATGGTGCTGAAGACAAACAA
CCTCACCTTCTGCCGCAACATCAGCGTGGACGAGGTGCTCTACTATGAGC
CGCATCCGTCGGATGCCAGCAAGACGCTGCTCAAGCAGGAGGCCACCGTG
ACCGTCTTTGGTGTGCCGCTGTCCCACTACATGGAGGACCTGCTCACCTC
GACCATTAGCACAAATGCCGGCAAGGGACGCCAGGGCCTGGAGTGGGTGA
TCGGGCTGATCAACACGGAGGTCAAGGGCATCGCTCGCGGCACCGACGAA
CTTCTGCACAACACACGGCGCTCCATCGACGAGGTGACGGAGAGCGCGCG
GAAGAGCATGGACGAGATCAGTGCGCAGGCCGCCAAGGCGGCGAAGGCGA
TGCACATTACGGCAAGCTTTCTAGACCAT
BO07749.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:16:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slmo-RE | 648 | CG9131-PE | 1..645 | 17..661 | 3225 | 100 | Plus |
slmo-RD | 648 | CG9131-PD | 1..645 | 17..661 | 3225 | 100 | Plus |
slmo-RC | 648 | CG9131-PC | 1..645 | 17..661 | 3225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:16:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slmo-RE | 1419 | CG9131-RE | 235..879 | 17..661 | 3225 | 100 | Plus |
slmo-RD | 2056 | CG9131-RD | 1007..1651 | 17..661 | 3225 | 100 | Plus |
slmo-RC | 1703 | CG9131-RC | 654..1298 | 17..661 | 3225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:16:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6047056..6047700 | 661..17 | 3225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:16:25 has no hits.
BO07749.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:53:31 Download gff for
BO07749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 1..648 | 17..662 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:25:41 Download gff for
BO07749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 449..1097 | 9..661 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:56:57 Download gff for
BO07749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 654..1298 | 17..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:53:31 Download gff for
BO07749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 449..1097 | 9..661 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:14:34 Download gff for
BO07749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
slmo-RC | 654..1298 | 17..663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:14:34 Download gff for
BO07749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6047054..6047700 | 17..663 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:56:57 Download gff for
BO07749.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6047054..6047700 | 17..663 | 99 | | Minus |
BO07749.pep Sequence
Translation from 16 to 679
> BO07749.pep
MKIWTSEHIFNHPWETVTQAAWRKYPNPMTPSIIGTDVVERRVVDGVLHT
HRLVQSKWYFPKWTHALIGTAKTCFASERSTVDPERKQMVLKTNNLTFCR
NISVDEVLYYEPHPSDASKTLLKQEATVTVFGVPLSHYMEDLLTSTISTN
AGKGRQGLEWVIGLINTEVKGIARGTDELLHNTRRSIDEVTESARKSMDE
ISAQAAKAAKAMHITASFLDH
BO07749.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:22:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
slmo-PE | 215 | CG9131-PE | 1..215 | 1..215 | 1130 | 100 | Plus |
slmo-PD | 215 | CG9131-PD | 1..215 | 1..215 | 1130 | 100 | Plus |
slmo-PC | 215 | CG9131-PC | 1..215 | 1..215 | 1130 | 100 | Plus |
slmo-PB | 215 | CG9131-PB | 1..215 | 1..215 | 1130 | 100 | Plus |
slmo-PA | 215 | CG9131-PA | 1..215 | 1..215 | 1130 | 100 | Plus |