Clone BO07791 Report

Search the DGRC for BO07791

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:77
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCp110-RA
Protein status:BO07791.pep: validated full length
Sequenced Size:1681

Clone Sequence Records

BO07791.3prime Sequence

901 bp (871 high quality bases) assembled on 2006-01-06

> BO07791.3prime
ATGGTCTAGAAAGCTTGCGGGCTTCTTGCGATTGCCCAGCCGCTTGGTCG
GTGAGGCGCTTTTTGGTGGGGCGCTTCCCCTTTTCGCTATAATGGAGCTA
TTTTTTCCCGGGGAACTTTTCGGTCGTCCTGCTCCACCTCCAGGCTTCGC
TGGCGATTTCTTCACCTCGCGGTCTGCTGCGGTGATTGTTTTTACTAGAC
TACCGCCCACAGATTGCGATCGGCGCCGGACAACTTGGACACTTCGTCTG
CTATTGGTTAAGCTGCTGTTCCGGAGGGGCAACGATCGCGGTGTGCTGGG
GGCACTGAGCAGCTGCGGTTCCGAGTCCTTTGATGGTTTTGGACTAAACA
GCCTCTTGCGAGCGGAAGAAGGCCCCGCAATTTGGCACTTGTCTTCCATC
GTCGGAAAGTCTTCTATGTCCTCTGAAAAGGAGGGTAACGTAGGCGAGGG
GGAAAAACGCTGCAGGTCTCCCGTACTGGTGCTTTGCGATATCAGACTGT
CAGGATTTTCGGTGGCCGAGGAAACATCAATTTCGGCACACAGTTCCTCT
ATGAGCTGACGCTGCTGATGATCAAACTCGGCCTGCATGCGACGACGTTC
CTTCTCCTGGTGAATGACCAATTGATTCATTCGCTCCCGATGGCCACGCA
GATAGTTGCGCACTCCTGCCTTGCGGCTGGCTTCCAAAGCGCCATGCTCG
TCCAGCGCCCGTTCTATTATACGCTCCACCTCGCGATCCCGCCTAGAACA
GCTGCTGCCGGCGGTTGTGGTTTTAGTGGCGATGGTGCTCTTGGTTGCGG
CGCTACTGTTGCTATTGTAGCTGTTGTGGCTAATTTTGCTGCTAATACTC
CTTGCACTACGGTTCACCCGCTTGGCCTGAGACTCGATGGTCTGCTTCTC
G

BO07791.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:10:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG14617-PA 1650 CG14617-RA 765..1647 901..19 4415 100 Minus
CG14617-PC 1650 CG14617-RC 765..1647 901..19 4415 100 Minus
CG14617-PE 1650 CG14617-RE 765..1647 901..19 4415 100 Minus
CG14617-PB 2001 CG14617-RB 765..1635 901..31 4355 100 Minus
CG14617-PD 2001 CG14617-RD 765..1635 901..31 4355 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:01:14
Subject Length Description Subject Range Query Range Score Percent Strand
Cp110-RG 2650 CG14617-RG 1217..2099 901..19 4415 100 Minus
Cp110-RF 2292 CG14617-RF 912..1794 901..19 4415 100 Minus
Cp110-RE 2919 CG14617-RE 1107..1989 901..19 4415 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:01:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 22483656..22484526 901..31 4355 100 Minus
Blast to na_te.dros performed 2015-02-10 16:01:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2758..2849 837..749 136 66.7 Minus

BO07791.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:29:19 Download gff for BO07791.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14617-PE 765..1650 18..901 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:15:59 Download gff for BO07791.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14617-PE 765..1650 18..901 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:08:48 Download gff for BO07791.3prime
Subject Subject Range Query Range Percent Splice Strand
Cp110-RE 1107..1988 20..901 100 <- Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:33:10 Download gff for BO07791.3prime
Subject Subject Range Query Range Percent Splice Strand
Cp110-RE 1107..1988 20..901 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:33:10 Download gff for BO07791.3prime
Subject Subject Range Query Range Percent Splice Strand
X 22483656..22484526 31..901 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:08:48 Download gff for BO07791.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 21885492..21886362 31..901 100 -> Minus

BO07791.5prime Sequence

903 bp (802 high quality bases) assembled on 2006-01-06

> BO07791.5prime
GAAGTTATCAGTCGACATGGATGCGACGTGGGCAATGGAGCAGCTGCTGT
CTGCAGTTGAGATGGGAGGTAGCCACAGCGAGGCCACCACACCAACGGCC
ACGACCACCATATCGATCTGGAGCGCCCCCTCCGAGGGCAGTGGCTCTAG
TTCCATGGACCCTGTCTCCTTTCGGTTCCACTTGGACGGGCAGCCTATAC
TGCCACCGCTGATGACGAGCGCCAAGAAGCGCGAGGTGCAGCTGGCCCGC
CAGATGGCAGAAGCGCTGGAGAAGCGGTACCGCCTGGCCAGACACTCGGC
GGGATCCGACATGGCCAGTAGGAGAAGTGTGTCACAGCTGCAGCAGACAG
AAACGTTAATCTATGACAGCACACGGGGCCAGGCTCGTCCTCAGACTCTG
GTCTTTGGCAAACAGTTGCCCACCATACAGGTGGATCCTCCCACGCCTCA
ACCATTTGTGAAATCAATAGAAAACACTTCCCCAAGGCGGCATAATCGCA
TTACCGATCGTATCCTGCAGTTCGAGCAGTCGGGACTGGGTAAGCTGCTG
CCCAAAGTTCCAGATAAGTGTATCCTGCGCACAAGTCCTGCGGTAGCCGA
AGACCAGCAGGATCAGGATACAAAGGACACAACGGCAAGGGAGCTCGGCA
GTCCACTGGCAGAACCAGCTAATTTTCAGCGTTCGAGAAGTTTCACACTA
GAGGAGCCCTCCCAGGTTCTCGTGGAGCACATGGAGAGGGAGGCCCTGGC
TGTGAAACCCAGCCAGAGTTTGGCCAACTTCGAGAAGCAGACCATCGAGT
CTCANGGCCAGCGGGTGAACCGTAGTGCAAGGAGTATTAGCAGCAAAATT
AGCCACAACAGCTACAATAGCAACAGTAGCGCCGCAACCAGAGCACCATC
GCC

BO07791.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:10:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG14617-PA 1650 CG14617-RA 1..874 17..890 4301 99.6 Plus
CG14617-PB 2001 CG14617-RB 1..874 17..890 4301 99.6 Plus
CG14617-PC 1650 CG14617-RC 1..874 17..890 4301 99.6 Plus
CG14617-PD 2001 CG14617-RD 1..874 17..890 4301 99.6 Plus
CG14617-PE 1650 CG14617-RE 1..874 17..890 4301 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:44:39
Subject Length Description Subject Range Query Range Score Percent Strand
Cp110-RH 2320 CG14617-RH 274..1161 17..903 4370 99.7 Plus
Cp110-RG 2650 CG14617-RG 453..1340 17..903 4370 99.7 Plus
Cp110-RE 2919 CG14617-RE 343..1230 17..903 4370 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:44:30
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 22483086..22483779 211..903 3379 99.4 Plus
X 23542271 X 22482841..22483026 30..215 915 99.5 Plus
Blast to na_te.dros performed on 2015-02-09 19:44:35 has no hits.

BO07791.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:29:20 Download gff for BO07791.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14617-PC 1..888 17..903 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:16:00 Download gff for BO07791.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14617-PE 1..888 17..903 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:10:42 Download gff for BO07791.5prime
Subject Subject Range Query Range Percent Splice Strand
Cp110-RE 338..1230 9..903 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:21:25 Download gff for BO07791.5prime
Subject Subject Range Query Range Percent Splice Strand
Cp110-RE 338..1230 9..903 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:21:25 Download gff for BO07791.5prime
Subject Subject Range Query Range Percent Splice Strand
X 22482842..22483022 31..211 100 -> Plus
X 22483087..22483779 212..903 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:10:42 Download gff for BO07791.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 21884678..21884858 31..211 100 -> Plus
arm_X 21884923..21885615 212..903 99   Plus

BO07791.complete Sequence

1681 bp (1681 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ630931

> BO07791.complete
GAAGTTATCAGTCGACATGGATGCGACGTGGGCAATGGAGCAGCTGCTGT
CTGCAGTTGAGATGGGAGGTAGCCACAGCGAGGCCACCACACCAACGGCC
ACGACCACCATATCGATCTGGAGCGCCCCCTCCGAGGGCAGTGGCTCTAG
TTCCATGGACCCTGTCTCCTTTCGGTTCCACTTGGACGGGCAGCCTATAC
TGCCACCGCTGATGACGAGCGCCAAGAAGCGCGAGGTGCAGCTGGCCCGC
CAGATGGCAGAAGCGCTGGAGAAGCGGTACCGCCTGGCCAGACACTCGGC
GGGATCCGACATGGCCAGTAGGAGAAGTGTGTCACAGCTGCAGCAGACAG
AAACGTTAATCTATGACAGCACACGGGGCCAGGCTCGTCCTCAGACTCTG
GTCTTTGGCAAACAGTTGCCCACCATACAGGTGGATCCTCCCACGCCTCA
ACCATTTGTGAAATCAATAGAAAACACTTCCCCAAGGCGGCATAATCGCA
TTACCGATCGTATCCTGCAGTTCGAGCAGTCGGGACTGGGTAAGCTGCTG
CCCAAAGTTCCAGATAAGTGTATCCTGCGCACAAGTCCTGCGGTAGCCGA
AGACCAGCAGGATCAGGATACAAAGGACACAACGGCAAGGGAGCTCGGCA
GTCCACTGGCAGAACCAGCTAATTTTCAGCGTTCGAGAAGTTTCACACTA
GAGGAGCCCTCCCAGGTTCTCGTGGAGCACATGGAGAGGGAGGCCCTGGC
TGTGAAACCCAGCCAGAGTTTGGCCAACTTCGAGAAGCAGACCATCGAGT
CTCAGGCCAAGCGGGTGAACCGTAGTGCAAGGAGTATTAGCAGCAAAATT
AGCCACAACAGCTACAATAGCAACAGTAGCGCCGCAACCAAGAGCACCAT
CGCCACTAAAACCACAACCGCCGGCAGCAGCTGTTCTAGGCGGGATCGCG
AGGTGGAGCGTATAATAGAACGGGCGCTGGACGAGCATGGCGCTTTGGAA
GCCAGCCGCAAGGCAGGAGTGCGCAACTATCTGCGTGGCCATCGGGAGCG
AATGAATCAATTGGTCATTCACCAGGAGAAGGAACGTCGTCGCATGCAGG
CCGAGTTTGATCATCAGCAGCGTCAGCTCATAGAGGAACTGTGTGCCGAA
ATTGATGTTTCCTCGGCCACCGAAAATCCTGACAGTCTGATATCGCAAAG
CACCAGTACGGGAGACCTGCAGCGTTTTTCCCCCTCGCCTACGTTACCCT
CCTTTTCAGAGGACATAGAAGACTTTCCGACGATGGAAGACAAGTGCCAA
ATTGCGGGGCCTTCTTCCGCTCGCAAGAGGCTGTTTAGTCCAAAACCATC
AAAGGACTCGGAACCGCAGCTGCTCAGTGCCCCCAGCACACCGCGATCGT
TGCCCCTCCGGAACAGCAGCTTAACCAATAGCAGACGAAGTGTCCAAGTT
GTCCGGCGCCGATCGCAATCTGTGGGCGGTAGTCTAGTAAAAACAATCAC
CGCAGCAGACCGCGAGGTGAAGAAATCGCCAGCGAAGCCTGGAGGTGGAG
CAGGACGACCGAAAAGTTCCCCGGGAAAAAATAGCTCCATTATAGCGAAA
AGGGGAAGCGCCCCACCAAAAAGCGCCTCACCGACCAAGCGGCTGGGCAA
TCGCAAGAAGCCCGCAAGCTTTCTAGACCAT

BO07791.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
Cp110-RG 1650 CG14617-PG 1..1647 17..1663 8235 100 Plus
Cp110-RE 1650 CG14617-PE 1..1647 17..1663 8235 100 Plus
Cp110-RC 1650 CG14617-PC 1..1647 17..1663 8235 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:20:35
Subject Length Description Subject Range Query Range Score Percent Strand
Cp110-RG 2650 CG14617-RG 453..2099 17..1663 8235 100 Plus
Cp110-RE 2919 CG14617-RE 343..1989 17..1663 8235 100 Plus
Cp110-RC 2487 CG14617-RC 343..1989 17..1663 8235 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:20:32
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 22483086..22484526 211..1651 7205 100 Plus
X 23542271 X 22482841..22483026 30..215 915 99.5 Plus
Blast to na_te.dros performed on 2014-11-27 08:20:33 has no hits.

BO07791.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:02:16 Download gff for BO07791.complete
Subject Subject Range Query Range Percent Splice Strand
CG14617-RE 1..1650 17..1664 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:21:02 Download gff for BO07791.complete
Subject Subject Range Query Range Percent Splice Strand
CG14617-RE 321..1971 9..1662 99 <- Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:57:40 Download gff for BO07791.complete
Subject Subject Range Query Range Percent Splice Strand
Cp110-RC 343..1989 17..1665 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:02:16 Download gff for BO07791.complete
Subject Subject Range Query Range Percent Splice Strand
CG14617-RE 321..1971 9..1662 99 <- Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:16:19 Download gff for BO07791.complete
Subject Subject Range Query Range Percent Splice Strand
Cp110-RC 343..1989 17..1665 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:16:19 Download gff for BO07791.complete
Subject Subject Range Query Range Percent Splice Strand
X 22482842..22483022 31..211 100 -> Plus
X 22483087..22484526 212..1651 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:57:40 Download gff for BO07791.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 21884678..21884858 31..211 100 -> Plus
arm_X 21884923..21886362 212..1651 100 -> Plus

BO07791.pep Sequence

Translation from 16 to 1681

> BO07791.pep
MDATWAMEQLLSAVEMGGSHSEATTPTATTTISIWSAPSEGSGSSSMDPV
SFRFHLDGQPILPPLMTSAKKREVQLARQMAEALEKRYRLARHSAGSDMA
SRRSVSQLQQTETLIYDSTRGQARPQTLVFGKQLPTIQVDPPTPQPFVKS
IENTSPRRHNRITDRILQFEQSGLGKLLPKVPDKCILRTSPAVAEDQQDQ
DTKDTTARELGSPLAEPANFQRSRSFTLEEPSQVLVEHMEREALAVKPSQ
SLANFEKQTIESQAKRVNRSARSISSKISHNSYNSNSSAATKSTIATKTT
TAGSSCSRRDREVERIIERALDEHGALEASRKAGVRNYLRGHRERMNQLV
IHQEKERRRMQAEFDHQQRQLIEELCAEIDVSSATENPDSLISQSTSTGD
LQRFSPSPTLPSFSEDIEDFPTMEDKCQIAGPSSARKRLFSPKPSKDSEP
QLLSAPSTPRSLPLRNSSLTNSRRSVQVVRRRSQSVGGSLVKTITAADRE
VKKSPAKPGGGAGRPKSSPGKNSSIIAKRGSAPPKSASPTKRLGNRKKPA
SFLDH

BO07791.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:36:26
Subject Length Description Subject Range Query Range Score Percent Strand
Cp110-PG 549 CG14617-PG 1..549 1..549 2760 100 Plus
Cp110-PE 549 CG14617-PE 1..549 1..549 2760 100 Plus
Cp110-PC 549 CG14617-PC 1..549 1..549 2760 100 Plus
Cp110-PA 549 CG14617-PA 1..549 1..549 2760 100 Plus
Cp110-PH 666 CG14617-PH 1..546 1..546 2740 99.8 Plus