Clone Sequence Records
BO07807.3prime Sequence
401 bp (400 high quality bases) assembled on 2006-01-06
> BO07807.3prime
ATGGTCTAGAAAGCTTGCTTGACCGCCAACACGTGCATCGCAAACCATTG
CACGTCCTCTTCCATTTGCAATGGACATCGGATGTCGAAAACCCGTGCAC
TGCCTCCCCACATTACACGTTGCATTTATCGCCTGCACATGCTGGCTGCA
CCCCTCCCCCACACCACTTCGCTCGCTCACACTCCGTCGCCCAACTATAG
AACGGCTTATAATAGCTAGACAGCACTTCCCGGCACTCCGCCTCTCTGCA
TCCATGCTTCTCTGCAGTTGTTGCGGTCTTGCCGCCTGATTTTTCGATTT
TCCGCTGTTTGCCTTTCTGCTGCGCGTGGCCTGCACTTGTGTGTGTGCGT
GAGTGAGTGAATGAGTGTGTGCTCTCTTCTTCTTCATGTCGACTGATAAC
T
BO07807.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:10:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9162-PA | 372 | CG9162-RA | 1..369 | 387..19 | 1845 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-11 04:00:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:00:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6078800..6079168 | 387..19 | 1845 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:00:23 has no hits.
BO07807.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:29:39 Download gff for
BO07807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9162-PA | 1..372 | 16..387 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:16:28 Download gff for
BO07807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9162-PA | 1..372 | 16..387 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:40:31 Download gff for
BO07807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6078800..6079172 | 15..387 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:40:31 Download gff for
BO07807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6078800..6079172 | 15..387 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:57:12 Download gff for
BO07807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6078800..6079172 | 15..387 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:57:12 Download gff for
BO07807.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6078800..6079172 | 15..387 | 99 | | Minus |
BO07807.5prime Sequence
401 bp (400 high quality bases) assembled on 2006-01-06
> BO07807.5prime
GAAGTTATCAGTCGACATGAAGAAGAAGAGAGCACACACTCATTCACTCA
CTCACGCACACACACAAGTGCAGGCCACGCGCAGCAGAAAGGCAAACAGC
GGAAAATCGAAAAATCAGGCGGCAAGACCGCAACAACTGCAGAGAAGCAT
GGATGCAGAGAGGCGGAGTGCCGGGAAGTGCTGTCTAGCTATTATAAGCC
GTTCTATAGTTGGGCGACGGAGTGTGAGCGAGCGAAGTGGTGTGGGGGAG
GGGTGCAGCCAGCATGTGCAGGCGATAAATGCAACGTGTAATGTGGGGAG
GCAGTGCACGGGTTTTCGACATCCGATGTCCATTGCAAATGGAAGAGGAC
GTGCAATGGTTTGCGATGCACGTGTTGGCGGTCAAGCAAGCTTTCTAGAC
C
BO07807.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:10:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9162-PA | 372 | CG9162-RA | 1..369 | 17..385 | 1845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2015-02-13 16:29:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:29:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6078800..6079168 | 17..385 | 1845 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 16:29:09 has no hits.
BO07807.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:29:40 Download gff for
BO07807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9162-PA | 1..372 | 17..388 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:16:29 Download gff for
BO07807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9162-PA | 1..372 | 17..388 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 19:07:02 Download gff for
BO07807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6078800..6079172 | 17..389 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 19:07:02 Download gff for
BO07807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6078800..6079172 | 17..389 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:12:49 Download gff for
BO07807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6078800..6079172 | 17..389 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:12:49 Download gff for
BO07807.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6078800..6079172 | 17..389 | 99 | | Plus |
BO07807.complete Sequence
403 bp (403 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630939
> BO07807.complete
GAAGTTATCAGTCGACATGAAGAAGAAGAGAGCACACACTCATTCACTCA
CTCACGCACACACACAAGTGCAGGCCACGCGCAGCAGAAAGGCAAACAGC
GGAAAATCGAAAAATCAGGCGGCAAGACCGCAACAACTGCAGAGAAGCAT
GGATGCAGAGAGGCGGAGTGCCGGGAAGTGCTGTCTAGCTATTATAAGCC
GTTCTATAGTTGGGCGACGGAGTGTGAGCGAGCGAAGTGGTGTGGGGGAG
GGGTGCAGCCAGCATGTGCAGGCGATAAATGCAACGTGTAATGTGGGGAG
GCAGTGCACGGGTTTTCGACATCCGATGTCCATTGCAAATGGAAGAGGAC
GTGCAATGGTTTGCGATGCACGTGTTGGCGGTCAAGCAAGCTTTCTAGAC
CAT
BO07807.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-27 10:26:08 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-27 10:26:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:26:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6078800..6079168 | 17..385 | 1845 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:26:07 has no hits.
BO07807.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:01:02 Download gff for
BO07807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9162-RA | 1..372 | 17..388 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:06:57 Download gff for
BO07807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9162-RA | 303..675 | 17..389 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:01:02 Download gff for
BO07807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9162-RA | 303..675 | 17..389 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:21:47 Download gff for
BO07807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6078800..6079168 | 17..387 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:21:47 Download gff for
BO07807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6078800..6079168 | 17..387 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:18:25 Download gff for
BO07807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6078800..6079168 | 17..387 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:18:25 Download gff for
BO07807.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6078800..6079168 | 17..387 | 99 | | Plus |
BO07807.pep Sequence
Translation from 16 to 403
> BO07807.pep
MKKKRAHTHSLTHAHTQVQATRSRKANSGKSKNQAARPQQLQRSMDAERR
SAGKCCLAIISRSIVGRRSVSERSGVGEGCSQHVQAINATCNVGRQCTGF
RHPMSIANGRGRAMVCDARVGGQASFLDH
Sequence BO07807.pep has no blast hits.