Clone BO07821 Report

Search the DGRC for BO07821

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:78
Well:21
Vector:pDNR-Dual
Associated Gene/Transcriptdpr5-RA
Protein status:BO07821.pep: validated full length
Sequenced Size:1042

Clone Sequence Records

BO07821.3prime Sequence

920 bp (821 high quality bases) assembled on 2006-01-06

> BO07821.3prime
ATGGTCTAGAAAGCTTGCGCGGGTTGAGAGCGGGGTGCGAATCTGGAGGC
TGGAGGTGGGGCCCAGCAGGACGACCAGCAGGACCGCCAGGAGCAACAGG
GGCAGAGGGGGCAGGAGCAGCCTCGAGCCCAGCTCGTGCTGCATGGCCGC
GTGCTGCTCACTTTTAATGATATGCACAAAGACGCTGTCAGAATTCGAGT
TGTCCGCGGAGCAGGTGTAGTTGCCCGAGTCCGTGTGCTGGACTCGCGAT
ATCACCAGGTTGCTGGTCTTCATCTGCTGCTCGGACTCTACGCGGATGCC
ACCCCGCGCCGAGTCGCTTACCAGCTCCGTGTCCTTGTGCCACAGCATGT
GCGTGTAGGGTCCTGGAGCCTGGGGTGCGATGCACGTCAGATTGATGTCG
CTGCCACTCTGGATGAACAGCTCGCGGTTGGCCAGGATCTGAGCCTTGGA
GGTCACGACGACCAGCTTGTAGGCCAGACTGATCTTGGGCTCCGTGGACA
CCTGGCACTCGTAGACGCCCGCATCTCTCTGCTGCACCGAAACGATCTTG
AGCACCCACTCGTCGGAGTTGTCGATGTGCCGCGCCAGAAAGCGCTGATC
GTTCGTGTAGGTCATGATGCCGATGGTCAGGATGTGGAGATCCCGTTGTC
GTATCCAGGACACCGCCCTGTCGCCCAGGTGGCGAACGCGGCAGTGGAGA
CGGGCGGTGGTGCCCAAAGCTGCAATAACCTCCCGATCTGTTGTGTTGTC
AAACACGGGATCGATGGCATCGTAATTATCTGGTATCAAGTTGGACAATT
CCTCGGCGGCGGCCAGATGGCCGAAGTATTGGCTGCTGCGCCGGCTCTGC
TTGTCGACTGGAGCGGGTAATCCCATGATCACGAGCAGCGCCATAAAGTA
TTCCACCAACATTTCATGCG

BO07821.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:11:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG5308-PA 1011 dpr5-RA 107..1008 920..19 4485 99.8 Minus
CG5308-PB 897 dpr5-RB 1..894 912..19 4445 99.8 Minus
CG33512-PA 891 dpr4-RA 297..332 514..479 155 97.2 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:45:07
Subject Length Description Subject Range Query Range Score Percent Strand
dpr5-RB 1419 CG5308-RB 78..979 920..19 4495 99.9 Minus
dpr5-RA 1817 CG5308-RA 476..1377 920..19 4495 99.9 Minus
dpr4-RB 2994 CG33512-RB 1201..1515 696..382 330 74.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:44:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11503411..11503780 822..453 1850 100 Minus
3R 32079331 3R 11504295..11504552 452..195 1290 100 Minus
3R 32079331 3R 11505274..11505449 194..19 880 100 Minus
3R 32079331 3R 11501147..11501246 920..821 485 99 Minus
3R 32079331 3R 11535995..11536180 479..664 255 75.8 Plus
Blast to na_te.dros performed on 2015-02-09 19:45:02 has no hits.

BO07821.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:30:01 Download gff for BO07821.3prime
Subject Subject Range Query Range Percent Splice Strand
dpr5-PA 107..1011 15..920 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:16:59 Download gff for BO07821.3prime
Subject Subject Range Query Range Percent Splice Strand
CG5308-PA 107..1011 15..920 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:10:47 Download gff for BO07821.3prime
Subject Subject Range Query Range Percent Splice Strand
dpr5-RA 476..1382 13..920 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:21:28 Download gff for BO07821.3prime
Subject Subject Range Query Range Percent Splice Strand
dpr5-RA 476..1382 13..920 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:21:28 Download gff for BO07821.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 11501147..11501245 822..920 98 -> Minus
3R 11503412..11503780 453..821 100 -> Minus
3R 11504295..11504552 195..452 100 -> Minus
3R 11505274..11505454 13..194 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:10:47 Download gff for BO07821.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7326869..7326967 822..920 98 -> Minus
arm_3R 7329134..7329502 453..821 100 -> Minus
arm_3R 7330017..7330274 195..452 100 -> Minus
arm_3R 7330996..7331176 13..194 98   Minus

BO07821.5prime Sequence

955 bp (892 high quality bases) assembled on 2006-01-06

> BO07821.5prime
GAAGTTATCAGTCGACATGAGATGGCGGCACGCAGTTCGCGCTACATTTA
CTTCGACCACGGCCACCGAATCTAGTCCGCTCATAGGAAAAGTTATAAGT
AATTCGAGAGCCCCACAAATTGCGCATGAAATGTTGGTGGAATACTTTAT
GGCGCTGCTCGTGATCATGGGATTAACCGCTCCAGTCGACAAGCAGAGCC
GGCGCAGCAGCCAATACTTCGGCCATCTGGCCGCCGCCGAGGAATTGTCC
AACTTGATACCAGATAATTACGATGCCATCGATCCCGTGTTTGACAACAC
AACAGATCGGGAGGTTATTGCAGCTTTGGGCACCACCGCCCGTCTCCACT
GCCGCGTTCGCCACCTGGGCGACAGGGCGGTGTCCTGGATACGACAACGG
GATCTCCACATCCTGACCATCGGCATCATGACCTACACGAACGATCAGCG
CTTTCTGGCGCGGCACATCGACAACTCCGACGAGTGGGTGCTCAAGATCG
TTTCGGTGCAGCAGAGAGATGCGGGCGTCTACGAGTGCCAGGTGTCCACG
GAGCCCAAGATCAGTCTGGCCTACAAGCTGGTCGTCGTGACCTCCAAGGC
TCAGATCCTGGCCAACCGCGAGCTGTTCATCCAGAGTGGCAGCGACATCA
ATCTGACGTGCATCGCACCCCAGGCTCCAGGACCCTACACGCACATGCTG
TGGCACAAGGACACGGAGCTGGTAAGCGACTCGGCGCGGGGTGGCATCCG
CGTAGAGTCCGAGCAGCAGATGAAGACCAGCAACCTGGTGATATCGCGAG
TCCAGCACACGGACTCGGGGCACTACACCTGCTCCGCGGACAACTCGAAT
TCTGACAGCGTCTTTGTGCATATCATTAAAAGTGAGCAGCACGCGGCCAT
GCAGCACGAGCTGGGCTCGAGGCTGCTCCTGCCCCCTCTGCCCCTGTTGC
TCCTG

BO07821.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:11:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG5308-PA 1011 dpr5-RA 1..939 17..955 4645 99.7 Plus
CG5308-PB 897 dpr5-RB 1..825 131..955 4075 99.7 Plus
CG33512-PA 891 dpr4-RA 297..332 529..564 155 97.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:10:18
Subject Length Description Subject Range Query Range Score Percent Strand
dpr5-RA 1817 CG5308-RA 369..1308 16..955 4670 99.8 Plus
dpr5-RB 1419 CG5308-RB 46..910 91..955 4295 99.8 Plus
dpr4-RB 2994 CG33512-RB 1201..1515 347..661 330 74.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:10:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11503411..11503780 221..590 1850 100 Plus
3R 32079331 3R 11504295..11504552 591..848 1260 99.2 Plus
3R 32079331 3R 11501115..11501246 91..222 660 100 Plus
3R 32079331 3R 11505274..11505380 849..955 535 100 Plus
3R 32079331 3R 11500352..11500428 16..92 385 100 Plus
3R 32079331 3R 11535995..11536180 564..379 255 75.8 Minus
Blast to na_te.dros performed on 2015-02-10 17:10:15 has no hits.

BO07821.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:30:02 Download gff for BO07821.5prime
Subject Subject Range Query Range Percent Splice Strand
dpr5-PA 1..939 17..955 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:17:00 Download gff for BO07821.5prime
Subject Subject Range Query Range Percent Splice Strand
CG5308-PA 1..939 17..955 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:09:08 Download gff for BO07821.5prime
Subject Subject Range Query Range Percent Splice Strand
dpr5-RA 367..1308 13..955 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:24:30 Download gff for BO07821.5prime
Subject Subject Range Query Range Percent Splice Strand
dpr5-RA 367..1308 13..955 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:24:30 Download gff for BO07821.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 11505274..11505380 849..955 100   Plus
3R 11500350..11500428 13..92 98 -> Plus
3R 11501117..11501245 93..221 100 -> Plus
3R 11503412..11503780 222..590 100 -> Plus
3R 11504295..11504552 591..848 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:09:08 Download gff for BO07821.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7326839..7326967 93..221 100 -> Plus
arm_3R 7329134..7329502 222..590 100 -> Plus
arm_3R 7326072..7326150 13..92 98 -> Plus
arm_3R 7330017..7330274 591..848 99 -> Plus
arm_3R 7330996..7331102 849..955 100   Plus

BO07821.complete Sequence

1042 bp (1042 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630943

> BO07821.complete
GAAGTTATCAGTCGACATGAGATGGCGGCACGCAGTTCGCGCTACATTTA
CTTCGACCACGGCCACCGAATCTAGTCCGCTCATAGGAAAAGTTATAAGT
AATTCGAGAGCCCCACAAATTGCGCATGAAATGTTGGTGGAATACTTTAT
GGCGCTGCTCGTGATCATGGGATTAACCGCTCCAGTCGACAAGCAGAGCC
GGCGCAGCAGCCAATACTTCGGCCATCTGGCCGCCGCCGAGGAATTGTCC
AACTTGATACCAGATAATTACGATGCCATCGATCCCGTGTTTGACAACAC
AACAGATCGGGAGGTTATTGCAGCTTTGGGCACCACCGCCCGTCTCCACT
GCCGCGTTCGCCACCTGGGCGACAGGGCGGTGTCCTGGATACGACAACGG
GATCTCCACATCCTGACCATCGGCATCATGACCTACACGAACGATCAGCG
CTTTCTGGCGCGGCACATCGACAACTCCGACGAGTGGGTGCTCAAGATCG
TTTCGGTGCAGCAGAGAGATGCGGGCGTCTACGAGTGCCAGGTGTCCACG
GAGCCCAAGATCAGTCTGGCCTACAAGCTGGTCGTCGTGACCTCCAAGGC
TCAGATCCTGGCCAACCGCGAGCTGTTCATCCAGAGTGGCAGCGACATCA
ATCTGACGTGCATCGCACCCCAGGCTCCAGGACCCTACACGCACATGCTG
TGGCACAAGGACACGGAGCTGGTAAGCGACTCGGCGCGGGGTGGCATCCG
CGTAGAGTCCGAGCAGCAGATGAAGACCAGCAACCTGGTGATATCGCGAG
TCCAGCACACGGACTCGGGCAACTACACCTGCTCCGCGGACAACTCGAAT
TCTGACAGCGTCTTTGTGCATATCATTAAAAGTGAGCAGCACGCGGCCAT
GCAGCACGAGCTGGGCTCGAGGCTGCTCCTGCCCCCTCTGCCCCTGTTGC
TCCTGGCGGTCCTGCTGGTCGTCCTGCTGGGCCCCACCTCCAGCCTCCAG
ATTCGCACCCCGCTCTCAACCCGCGCAAGCTTTCTAGACCAT

BO07821.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:09:23
Subject Length Description Subject Range Query Range Score Percent Strand
dpr5-RA 1011 CG5308-PA 1..1008 17..1024 5040 100 Plus
dpr5-RB 897 CG5308-PB 1..894 131..1024 4470 100 Plus
dpr4-RB 972 CG33512-PB 196..510 347..661 330 73.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:09:24
Subject Length Description Subject Range Query Range Score Percent Strand
dpr5-RA 1817 CG5308-RA 369..1377 16..1024 5045 100 Plus
dpr5-RB 1419 CG5308-RB 46..979 91..1024 4670 100 Plus
dpr4-RB 2994 CG33512-RB 1201..1515 347..661 330 73.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:09:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11503411..11503780 221..590 1850 100 Plus
3R 32079331 3R 11504295..11504552 591..848 1290 100 Plus
3R 32079331 3R 11505274..11505449 849..1024 880 100 Plus
3R 32079331 3R 11501115..11501246 91..222 660 100 Plus
3R 32079331 3R 11500352..11500428 16..92 385 100 Plus
3R 32079331 3R 11535995..11536180 564..379 255 75.8 Minus
Blast to na_te.dros performed on 2014-11-27 20:09:22 has no hits.

BO07821.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:14:39 Download gff for BO07821.complete
Subject Subject Range Query Range Percent Splice Strand
dpr5-RA 1..1011 17..1028 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:36:15 Download gff for BO07821.complete
Subject Subject Range Query Range Percent Splice Strand
dpr5-RA 367..1382 13..1030 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:07:23 Download gff for BO07821.complete
Subject Subject Range Query Range Percent Splice Strand
dpr5-RA 370..1377 17..1026 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:14:40 Download gff for BO07821.complete
Subject Subject Range Query Range Percent Splice Strand
dpr5-RA 367..1382 13..1030 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:16:00 Download gff for BO07821.complete
Subject Subject Range Query Range Percent Splice Strand
dpr5-RA 370..1377 17..1026 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:16:00 Download gff for BO07821.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11500353..11500428 17..92 100 -> Plus
3R 11501117..11501245 93..221 100 -> Plus
3R 11503412..11503780 222..590 100 -> Plus
3R 11504295..11504552 591..848 100 -> Plus
3R 11505274..11505449 849..1026 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:07:23 Download gff for BO07821.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7326075..7326150 17..92 100 -> Plus
arm_3R 7326839..7326967 93..221 100 -> Plus
arm_3R 7329134..7329502 222..590 100 -> Plus
arm_3R 7330017..7330274 591..848 100 -> Plus
arm_3R 7330996..7331171 849..1026 98   Plus

BO07821.pep Sequence

Translation from 16 to 1042

> BO07821.pep
MRWRHAVRATFTSTTATESSPLIGKVISNSRAPQIAHEMLVEYFMALLVI
MGLTAPVDKQSRRSSQYFGHLAAAEELSNLIPDNYDAIDPVFDNTTDREV
IAALGTTARLHCRVRHLGDRAVSWIRQRDLHILTIGIMTYTNDQRFLARH
IDNSDEWVLKIVSVQQRDAGVYECQVSTEPKISLAYKLVVVTSKAQILAN
RELFIQSGSDINLTCIAPQAPGPYTHMLWHKDTELVSDSARGGIRVESEQ
QMKTSNLVISRVQHTDSGNYTCSADNSNSDSVFVHIIKSEQHAAMQHELG
SRLLLPPLPLLLLAVLLVVLLGPTSSLQIRTPLSTRASFLDH

BO07821.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:49:10
Subject Length Description Subject Range Query Range Score Percent Strand
dpr5-PA 336 CG5308-PA 1..336 1..336 1708 100 Plus
dpr5-PB 298 CG5308-PB 1..298 39..336 1515 100 Plus
dpr4-PB 323 CG33512-PB 45..279 90..324 670 56.2 Plus
dpr8-PB 344 CG32600-PB 42..297 90..336 485 41.8 Plus
dpr8-PA 344 CG32600-PA 42..297 90..336 485 41.8 Plus