Clone BO07832 Report

Search the DGRC for BO07832

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:78
Well:32
Vector:pDNR-Dual
Associated Gene/TranscriptCG31523-RA
Protein status:BO07832.pep: validated full length
Sequenced Size:1096

Clone Sequence Records

BO07832.3prime Sequence

912 bp (801 high quality bases) assembled on 2006-01-06

> BO07832.3prime
ATGGTCTAGAAAGCTTGCTTTGACTTTGCGCTGGTGCAGACTAGAACTAC
TGCTGTCCGGGTTGAAGATGGCATCGTTGTTGGATAACACGCCCTCCTTG
AAGAAGCCCTCCTTGTAGGCACCATTCGATTGCCCCTTGCTTTTGACGTA
CTCGTCCTCCATCACCGGCATGCAAGCCCCAGTATTGCAACCGTTTGCAA
TCAGGGCGTCACCCTCTCCAAGATGCTTGCTGTGCCCATTCGAAGCCGAG
CCGTTGGCATAGCCATTGGCCTTGACCGCCTGCCGGCGACGTCGAGCTGC
GTTGAGATATTTCGCTTTGTAAAAGTCGGAGAACAGGAACAGGAACATAA
CGCCGTGCAATCCGATCCAGACCATGAAGCCCTTGGGGTAATCACATTCG
CGGAACAAAAGCTGGAACTGGTGGGTGAAAATGGCCACGAATTGAACCAT
TTGGAAGGTGGTCAGGTACTTCTTCCACCAGATGTACTTCTGGTACTTTG
GACCCATGGCGGCGATCATGTAGTAGAAATACATTACAATGTGCACAAAC
GAGTTGAGAAGGGCAAAGAAAGTGCTATGACCGCCTGGCGCAAACTTCAG
ACCCATCCAGACGGAGAACGGCATGCAGCCGTGATGGATGACGTGTAGTG
TGGAGACGTGCTCGTTCTTTTTTCGCAGAATGAAGAAGAGTGTGTCGAAG
AACTCGGTGAACTTAGATATGTAGTACCACCAGCAAATGTTGACCATCCG
CATGGCCAAGCCAGTGGTGCTATAGTCAACGGGCTGACACTTTAAGCTGT
AGTGGCCCCACCATCCGCTCATTAAGTACTCATAAAAGATCCACGCGCTA
AATATTGTTTGTATCGCGTTGTATACAACTAAAACAGATCGCAACTCCCT
CGGGTTTCGTTT

BO07832.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:11:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG31523-PC 1065 CG31523-RC 183..1062 898..19 4400 100 Minus
CG31523-PB 1065 CG31523-RB 183..1062 898..19 4400 100 Minus
CG31523-PA 1065 CG31523-RA 183..1062 898..19 4400 100 Minus
CG31523-PD 1065 CG31523-RD 183..1062 898..19 4400 100 Minus
CG31522-PA 1095 CG31522-RA 552..620 526..458 195 91.3 Minus
CG31522-PD 1098 CG31522-RD 555..623 526..458 195 91.3 Minus
CG31522-PB 1098 CG31522-RB 555..623 526..458 195 91.3 Minus
CG31522-PA 1095 CG31522-RA 425..458 653..620 145 97 Minus
CG31522-PD 1098 CG31522-RD 428..461 653..620 145 97 Minus
CG31522-PB 1098 CG31522-RB 428..461 653..620 145 97 Minus
CG2781-PA 990 CG2781-RA 343..386 735..692 145 93.1 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:22:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG31523-RF 2585 CG31523-RF 419..1312 912..19 4425 99.7 Minus
CG31523-RE 3232 CG31523-RE 1066..1959 912..19 4425 99.7 Minus
CG31523-RG 2576 CG31523-RG 410..1303 912..19 4425 99.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:22:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4467294..4467573 169..448 1400 100 Plus
3R 32079331 3R 4467843..4468007 584..748 825 100 Plus
3R 32079331 3R 4466694..4466844 19..169 755 100 Plus
3R 32079331 3R 4467630..4467771 446..587 710 100 Plus
3R 32079331 3R 4468066..4468148 748..830 415 100 Plus
3R 32079331 3R 7982860..7983134 461..735 415 76.7 Plus
3R 32079331 3R 4468214..4468297 829..912 375 96.4 Plus
3R 32079331 3R 4444122..4444251 458..587 335 83.8 Plus
3R 32079331 3R 22555672..22555780 560..452 290 84.4 Minus
Blast to na_te.dros performed on 2015-02-12 00:22:11 has no hits.

BO07832.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:30:21 Download gff for BO07832.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31523-PA 169..1065 15..912 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:17:26 Download gff for BO07832.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31523-PB 169..1065 15..912 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:49:26 Download gff for BO07832.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31523-RD 278..1179 8..912 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:07:22 Download gff for BO07832.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31523-RG 410..1311 8..912 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:07:22 Download gff for BO07832.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 4467844..4468006 585..747 100 <- Plus
3R 4468066..4468146 748..828 100 <- Plus
3R 4468214..4468297 829..912 96   Plus
3R 4466686..4466843 8..168 96 <- Plus
3R 4467294..4467572 169..447 100 <- Plus
3R 4467632..4467768 448..584 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:49:26 Download gff for BO07832.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 292408..292565 8..168 96 <- Plus
arm_3R 293016..293294 169..447 100 <- Plus
arm_3R 293354..293490 448..584 100 <- Plus
arm_3R 293566..293728 585..747 100 <- Plus
arm_3R 293788..293868 748..828 100 <- Plus
arm_3R 293936..294019 829..912 96   Plus

BO07832.5prime Sequence

841 bp (825 high quality bases) assembled on 2006-01-06

> BO07832.5prime
GAAGTTATCAGTCGACATGGCAATCATACTGCAAGAAGCCCAGAAGTGGT
ATCGGGACCTAATGGACAATAAAAGCGATCCTCGCGTTAACGACTTCTTT
CTGCTATCCTCGCCACTGCCCACACTTTGTATGTGCATATTCTATGCCTA
CTTCAGCAAATCCCTGGGGCCCAGGCTGATGGCCAAACGGAAACCGATGG
AGTTGCGATCTGTTTTAGTTGTATACAACGCGATACAAACAATATTTAGC
GCGTGGATCTTTTATGAGTACTTAATGAGCGGATGGTGGGGCCACTACAG
CTTAAAGTGTCAGCCCGTTGACTATAGCACCACTGGCTTGGCCATGCGGA
TGGTCAACATTTGCTGGTGGTACTACATATCTAAGTTCACCGAGTTCTTC
GACACACTCTTCTTCATTCTGCGAAAAAAGAACGAGCACGTCTCCACACT
ACACGTCATCCATCACGGCTGCATGCCGTTCTCCGTCTGGATGGGTCTGA
AGTTTGCGCCAGGCGGTCATAGCACTTTCTTTGCCCTTCTCAACTCGTTT
GTGCACATTGTAATGTATTTCTACTACATGATCGCCGCCATGGGTCCAAA
GTACCAGAAGTACATCTGGTGGAAGAAGTACCTGACCACCTTCCAAATGG
TTCAATTCGTGGCCATTTTCACCCACCAGTTCCAGCTTTTGTTCCGCGAA
TGTGATTACCCCAAGGGCTTCATGGTCTGGATCGGATTGCACGGCGTTAT
GTTCCTGTTCCTGTTCTCCGACTTTTACAAAGCGAAATATCTCAACGCAG
CTCGACGTCGCCGGCAGGCGGTCAAGGCCAATGGCTATGCC

BO07832.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:11:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG31523-PC 1065 CG31523-RC 1..825 17..841 4125 100 Plus
CG31523-PB 1065 CG31523-RB 1..825 17..841 4125 100 Plus
CG31523-PA 1065 CG31523-RA 1..825 17..841 4125 100 Plus
CG31523-PD 1065 CG31523-RD 1..825 17..841 4125 100 Plus
CG31522-PA 1095 CG31522-RA 552..620 571..639 195 91.3 Plus
CG31522-PD 1098 CG31522-RD 555..623 571..639 195 91.3 Plus
CG31522-PB 1098 CG31522-RB 555..623 571..639 195 91.3 Plus
CG31522-PA 1095 CG31522-RA 425..458 444..477 145 97 Plus
CG31522-PD 1098 CG31522-RD 428..461 444..477 145 97 Plus
CG31522-PB 1098 CG31522-RB 428..461 444..477 145 97 Plus
CG2781-PA 990 CG2781-RA 343..386 362..405 145 93.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:02:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG31523-RF 2585 CG31523-RF 251..1075 17..841 4125 100 Plus
CG31523-RE 3232 CG31523-RE 898..1722 17..841 4125 100 Plus
CG31523-RG 2576 CG31523-RG 242..1066 17..841 4125 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:02:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4467381..4467573 841..649 965 100 Minus
3R 32079331 3R 4468214..4468405 268..77 960 100 Minus
3R 32079331 3R 4467843..4468007 513..349 825 100 Minus
3R 32079331 3R 4467630..4467771 651..510 710 100 Minus
3R 32079331 3R 4468066..4468148 349..267 415 100 Minus
3R 32079331 3R 7982860..7983134 636..362 415 76.7 Minus
3R 32079331 3R 4444122..4444251 639..510 335 83.8 Minus
3R 32079331 3R 4468464..4468524 77..17 305 100 Minus
3R 32079331 3R 22555672..22555780 537..645 290 84.4 Plus
Blast to na_te.dros performed on 2015-02-11 22:02:51 has no hits.

BO07832.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:30:23 Download gff for BO07832.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31523-PA 1..825 17..841 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:17:28 Download gff for BO07832.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31523-PB 1..825 17..841 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:46:35 Download gff for BO07832.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31523-RD 103..934 9..841 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:53:08 Download gff for BO07832.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31523-RG 235..1066 9..841 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:53:08 Download gff for BO07832.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 4467381..4467572 650..841 100 <- Minus
3R 4467632..4467768 513..649 100 <- Minus
3R 4467844..4468006 350..512 100 <- Minus
3R 4468066..4468146 269..349 100 <- Minus
3R 4468214..4468404 78..268 100 <- Minus
3R 4468464..4468531 9..77 94   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:46:35 Download gff for BO07832.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 293103..293294 650..841 100 <- Minus
arm_3R 293354..293490 513..649 100 <- Minus
arm_3R 293566..293728 350..512 100 <- Minus
arm_3R 293788..293868 269..349 100 <- Minus
arm_3R 293936..294126 78..268 100 <- Minus
arm_3R 294186..294253 9..77 94   Minus

BO07832.complete Sequence

1096 bp (1096 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630947

> BO07832.complete
GAAGTTATCAGTCGACATGGCAATCATACTGCAAGAAGCCCAGAAGTGGT
ATCGGGACCTAATGGACAATAAAAGCGATCCTCGCGTTAACGACTTCTTT
CTGCTATCCTCGCCACTGCCCACACTTTGTATGTGCATATTCTATGCCTA
CTTCAGCAAATCCCTGGGGCCCAGGCTGATGGCCAAACGGAAACCGATGG
AGTTGCGATCTGTTTTAGTTGTATACAACGCGATACAAACAATATTTAGC
GCGTGGATCTTTTATGAGTACTTAATGAGCGGATGGTGGGGCCACTACAG
CTTAAAGTGTCAGCCCGTTGACTATAGCACCACTGGCTTGGCCATGCGGA
TGGTCAACATTTGCTGGTGGTACTACATATCTAAGTTCACCGAGTTCTTC
GACACACTCTTCTTCATTCTGCGAAAAAAGAACGAGCACGTCTCCACACT
ACACGTCATCCATCACGGCTGCATGCCGTTCTCCGTCTGGATGGGTCTGA
AGTTTGCGCCAGGCGGTCATAGCACTTTCTTTGCCCTTCTCAACTCGTTT
GTGCACATTGTAATGTATTTCTACTACATGATCGCCGCCATGGGTCCAAA
GTACCAGAAGTACATCTGGTGGAAGAAGTACCTGACCACCTTCCAAATGG
TTCAATTCGTGGCCATTTTCACCCACCAGTTCCAGCTTTTGTTCCGCGAA
TGTGATTACCCCAAGGGCTTCATGGTCTGGATCGGATTGCACGGCGTTAT
GTTCCTGTTCCTGTTCTCCGACTTTTACAAAGCGAAATATCTCAACGCAG
CTCGACGTCGCCGGCAGGCGGTCAAGGCCAATGGCTATGCCAACGGCTCG
GCTTCGAATGGGCACAGCAAGCATCTTGGAGAGGGTGACGCCCTGATTGC
AAACGGTTGCAATACTGGGGCTTGCATGCCGGTGATGGAGGACGAGTACG
TCAAAAGCAAGGGGCAATCGAATGGTGCCTACAAGGAGGGCTTCTTCAAG
GAGGGCGTGTTATCCAACAACGATGCCATCTTCAACCCGGACAGCAGTAG
TTCTAGTCTGCACCAGCGCAAAGTCAAAGCAAGCTTTCTAGACCAT

BO07832.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:33:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG31523-RF 1065 CG31523-PF 1..1062 17..1078 5310 100 Plus
CG31523-RE 1065 CG31523-PE 1..1062 17..1078 5310 100 Plus
CG31523-RG 1065 CG31523-PG 1..1062 17..1078 5310 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:33:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG31523-RF 2585 CG31523-RF 251..1312 17..1078 5310 100 Plus
CG31523-RE 3232 CG31523-RE 898..1959 17..1078 5310 100 Plus
CG31523-RG 2576 CG31523-RG 242..1303 17..1078 5310 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:33:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4467294..4467573 928..649 1400 100 Minus
3R 32079331 3R 4468214..4468405 268..77 960 100 Minus
3R 32079331 3R 4467843..4468007 513..349 825 100 Minus
3R 32079331 3R 4466694..4466844 1078..928 755 100 Minus
3R 32079331 3R 4467630..4467771 651..510 710 100 Minus
3R 32079331 3R 4468066..4468148 349..267 415 100 Minus
3R 32079331 3R 7982860..7983134 636..362 415 76.7 Minus
3R 32079331 3R 4444122..4444251 639..510 335 83.8 Minus
3R 32079331 3R 4468464..4468524 77..17 305 100 Minus
3R 32079331 3R 22555672..22555780 537..645 290 84.4 Plus
Blast to na_te.dros performed on 2014-11-27 23:33:50 has no hits.

BO07832.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:14:24 Download gff for BO07832.complete
Subject Subject Range Query Range Percent Splice Strand
CG31523-RA 1..1065 17..1082 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:36:00 Download gff for BO07832.complete
Subject Subject Range Query Range Percent Splice Strand
CG31523-RA 555..1631 9..1089 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:31:56 Download gff for BO07832.complete
Subject Subject Range Query Range Percent Splice Strand
CG31523-RD 110..1171 17..1080 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:14:25 Download gff for BO07832.complete
Subject Subject Range Query Range Percent Splice Strand
CG31523-RA 555..1631 9..1089 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:03:21 Download gff for BO07832.complete
Subject Subject Range Query Range Percent Splice Strand
CG31523-RG 242..1303 17..1080 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:03:21 Download gff for BO07832.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4466692..4466843 929..1080 98 <- Minus
3R 4467844..4468006 350..512 100 <- Minus
3R 4468066..4468146 269..349 100 <- Minus
3R 4468214..4468404 78..268 100 <- Minus
3R 4468464..4468524 17..77 100   Minus
3R 4467294..4467572 650..928 100 <- Minus
3R 4467632..4467768 513..649 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:31:56 Download gff for BO07832.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 292414..292565 929..1080 98 <- Minus
arm_3R 293016..293294 650..928 100 <- Minus
arm_3R 293354..293490 513..649 100 <- Minus
arm_3R 293566..293728 350..512 100 <- Minus
arm_3R 293788..293868 269..349 100 <- Minus
arm_3R 293936..294126 78..268 100 <- Minus
arm_3R 294186..294246 17..77 100   Minus

BO07832.pep Sequence

Translation from 16 to 1096

> BO07832.pep
MAIILQEAQKWYRDLMDNKSDPRVNDFFLLSSPLPTLCMCIFYAYFSKSL
GPRLMAKRKPMELRSVLVVYNAIQTIFSAWIFYEYLMSGWWGHYSLKCQP
VDYSTTGLAMRMVNICWWYYISKFTEFFDTLFFILRKKNEHVSTLHVIHH
GCMPFSVWMGLKFAPGGHSTFFALLNSFVHIVMYFYYMIAAMGPKYQKYI
WWKKYLTTFQMVQFVAIFTHQFQLLFRECDYPKGFMVWIGLHGVMFLFLF
SDFYKAKYLNAARRRRQAVKANGYANGSASNGHSKHLGEGDALIANGCNT
GACMPVMEDEYVKSKGQSNGAYKEGFFKEGVLSNNDAIFNPDSSSSSLHQ
RKVKASFLDH

BO07832.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:49:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG31523-PF 354 CG31523-PF 1..354 1..354 1929 100 Plus
CG31523-PE 354 CG31523-PE 1..354 1..354 1929 100 Plus
CG31523-PG 354 CG31523-PG 1..354 1..354 1929 100 Plus
CG31523-PD 354 CG31523-PD 1..354 1..354 1929 100 Plus
CG31523-PA 354 CG31523-PA 1..354 1..354 1929 100 Plus