Clone BO07834 Report

Search the DGRC for BO07834

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:78
Well:34
Vector:pDNR-Dual
Associated Gene/TranscriptCG32549-RC
Protein status:BO07834.pep: validated not full length
Sequenced Size:1558

Clone Sequence Records

BO07834.3prime Sequence

964 bp (815 high quality bases) assembled on 2006-01-06

> BO07834.3prime
ATGGTCTAGAAAGCTTGCGTCTTCGGAGGCATCGCGCACAGCCTCTGTGG
AAGACTCGGCACCACTGGGTGTCTCCTCCTCCTCGGAATAGTCCTCGTCA
TGGGTGTGGGTCACCACGGTGGGCGTCGACGGACGAGTGTGCACAATGGA
GCTTGCGCGATGCAAGTCCTTGGGGTCCTTAACGTGCTCGGCGGTGCCCG
CCAAAATGCGAGCCGGCTCATCCGGCGAGGCAGCCACCGATGCGGCTCCC
GTAGCCGGAACAGGAACAGGGCCCAGTGGCGGAGGCGGCTGATGGGCCTG
ATCATGGGCCACCGTCGACTCATGGGGCAGAAGCATGGCCGGAGCTCGGA
ACATATACGAGAATGGGTAGTAAATGAGGTTGAGCAGGGTGGCCGCATAG
ACGTCGGCATATCGCACCACCTGGCTGGAGAAGAAGGTCTGGCGCGAGCC
GGAGCGGAAGAGTGAGCCCATCATACCGTAGGACATGTCCATCTTGTGTG
TCACATCGCGGATGCACGTGCGCAGCTGCGAAATGTCCGGCTTGACCTTG
GCACTCGAGTCGAGATCCCTGTACAGGTCGCCCAGCTTGATGTCCAGGTT
CTGTAGCTCCGCAAACAGCTGGCACTCATCCGTCCAAACGTGCAGCTCCC
TCACCAATTCGGGCACAATTAGGAAGGTGCGCCAGCCTCGAATCTTCTTC
GATTTGAGAATATCGCCAAAAATGTGATCGCCCACATAGAGCACGTCCTT
GCCTTTGGCATTGATGAACTTGGTAAAGAGCTCGCAGGAGCCACCGGAAT
AAACCTGACCCGGCTGCAGGGGTCCAACGTGTGTGCCGATCTTCAGGCTT
CCGGTCTTCGTGTCCACCTGCCGCAGCACGGTGCCCTCGTCGAAGAAGAG
CGGCTTGCGGGCATCCACCACGATCACATCGAAGTAGGTCTTCCAGTCGC
GATGCGGCTCATCC

BO07834.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:11:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG32549-PD 1746 CG32549-RD 798..1743 964..19 4730 100 Minus
CG32549-PE 1893 CG32549-RE 945..1890 964..19 4730 100 Minus
CG32549-PC 1527 CG32549-RC 579..1524 964..19 4730 100 Minus
CG32549-PA 2148 CG32549-RA 1200..2145 964..19 4730 100 Minus
CG32549-PB 1839 CG32549-RB 891..1836 964..19 4730 100 Minus
CG32549-PF 1839 CG32549-RF 891..1836 964..19 4730 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG32549-RH 2677 CG32549-RH 1490..2435 964..19 4730 100 Minus
CG32549-RG 2806 CG32549-RG 1619..2564 964..19 4730 100 Minus
CG32549-RF 2652 CG32549-RF 1407..2352 964..19 4730 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:06:21
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18390998..18391808 154..964 4055 100 Plus
X 23542271 X 18390798..18390932 19..153 675 100 Plus
Blast to na_te.dros performed on 2015-02-12 10:06:22 has no hits.

BO07834.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:30:25 Download gff for BO07834.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32549-PA 1200..2148 18..964 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:17:32 Download gff for BO07834.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32549-PF 891..1839 18..964 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:46:38 Download gff for BO07834.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32549-RF 1407..2352 19..964 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:04:45 Download gff for BO07834.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32549-RF 1407..2352 19..964 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:04:45 Download gff for BO07834.3prime
Subject Subject Range Query Range Percent Splice Strand
X 18390798..18390932 19..153 100 <- Plus
X 18390998..18391808 154..964 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:46:38 Download gff for BO07834.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 18284831..18284965 19..153 100 <- Plus
arm_X 18285031..18285841 154..964 100   Plus

BO07834.5prime Sequence

922 bp (800 high quality bases) assembled on 2006-01-06

> BO07834.5prime
GAAGTTATCAGTCGACATGGGCTACCCCAAGGAGATCCTGCAGTTCGAGT
ACGATCCCACCTTCCCAGTACGCGGCCTGTGGTTCGACACTCTCTACGGG
AATCTGCTGAAAGTGGATGCCTACGGCAACATCCTGGTCTGCGTTCATGG
CTTCGAGTTCATCAAACATCACCAGGTGTACGAGTTGTATCCCAACAAGT
TCTTGAAACTGGACGAGTCGCGTGTCTATGTCCTGAATACTCTCTTCAAT
CTTCCTGAAACCTATCTCCTTGCCTGTCTCGTCGACTTCCTAACCAACAG
CAGCGACTTTGTGCGCGTTGAGCGCGGCATCAAAGCTGGCGATTTACTTT
TTACCTACAAGTCGATTTTCCAGGATGTGCGACGTGCCGTCGACTGGGTG
CATTCCGATGGCGATCTGAAGCGTCGCACCACTCAGAATATGGCTCACTA
TGTGAAGAAGGACGAGCGTTTGCCCACGGTCCTTTCGCGAATCCGGGAGT
CGGGCGCCAAACTCTTTATGCTGACCAACAGCGACTATACGTACACCAAC
GAGATCATGACCTACCTGTTTGATTTCCCCCATGGCGCCACTCCGGATGA
GCCGCATCGCGACTGGAAGACCTACTTCGATGTGATCGTGGTGGATGCCC
GCAAGCCGCTCTTCTTCGACGAGGGCACCGTGCTGCGGCAGGTGGACACG
AAGACCGGAAGCCTGAAGATCGGCACACACGTTGGACCCCTGCAGCCGGG
TCAGGTTTATTCCGGTGGCTCCTGCGAGCTCTTTACCAAGTTCATCAATG
CCAAAGGCAAGGACGTGCTCTATGTGGGCGATCACATTTTTGGCGATATT
CTCAAATCGAAGAAGATTCGAGGCTGGCGCACCTTCCTAATTGTGCCCGA
ATTGGTGAGGGAGCTGCACGTT

BO07834.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:11:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG32549-PD 1746 CG32549-RD 219..1125 16..922 4535 100 Plus
CG32549-PE 1893 CG32549-RE 366..1272 16..922 4535 100 Plus
CG32549-PA 2148 CG32549-RA 621..1527 16..922 4535 100 Plus
CG32549-PB 1839 CG32549-RB 312..1218 16..922 4535 100 Plus
CG32549-PF 1839 CG32549-RF 312..1218 16..922 4535 100 Plus
CG32549-PC 1527 CG32549-RC 1..906 17..922 4530 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:01:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG32549-RH 2677 CG32549-RH 911..1817 16..922 4535 100 Plus
CG32549-RG 2806 CG32549-RG 1040..1946 16..922 4535 100 Plus
CG32549-RF 2652 CG32549-RF 828..1734 16..922 4535 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:01:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18391481..18391968 922..435 2440 100 Minus
X 23542271 X 18392549..18392701 168..16 765 100 Minus
X 23542271 X 18392335..18392481 315..169 735 100 Minus
X 23542271 X 18392040..18392161 436..315 610 100 Minus
Blast to na_te.dros performed on 2015-02-11 04:01:40 has no hits.

BO07834.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:30:26 Download gff for BO07834.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32549-PA 616..1527 11..922 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:17:33 Download gff for BO07834.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32549-PF 307..1218 11..922 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:57:15 Download gff for BO07834.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32549-RF 823..1734 11..922 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:44:06 Download gff for BO07834.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32549-RF 823..1734 11..922 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:44:06 Download gff for BO07834.5prime
Subject Subject Range Query Range Percent Splice Strand
X 18391481..18391966 437..922 100 <- Minus
X 18392040..18392160 316..436 100 <- Minus
X 18392335..18392481 169..315 100 <- Minus
X 18392549..18392706 11..168 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:57:15 Download gff for BO07834.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 18285514..18285999 437..922 100 <- Minus
arm_X 18286073..18286193 316..436 100 <- Minus
arm_X 18286368..18286514 169..315 100 <- Minus
arm_X 18286582..18286739 11..168 98   Minus

BO07834.complete Sequence

1558 bp (1558 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630949

> BO07834.complete
GAAGTTATCAGTCGACATGGGCTACCCCAAGGAGATCCTGCAGTTCGAGT
ACGATCCCACCTTCCCAGTACGCGGCCTGTGGTTCGACACTCTCTACGGG
AATCTGCTGAAAGTGGATGCCTACGGCAACATCCTGGTCTGCGTTCATGG
CTTCGAGTTCATCAAACATCACCAGGTGTACGAGTTGTATCCCAACAAGT
TCTTGAAACTGGACGAGTCGCGTGTCTATGTCCTGAATACTCTCTTCAAT
CTTCCTGAAACCTATCTCCTTGCCTGTCTCGTCGACTTCCTAACCAACAG
CAGCGACTTTGTGCGCGTTGAGCGCGGCATCAAAGCTGGCGATTTACTTT
TTACCTACAAGTCGATTTTCCAGGATGTGCGACGTGCCGTCGACTGGGTG
CATTCCGATGGCGATCTGAAGCGTCGCACCACTCAGAATATGGCTCACTA
TGTGAAGAAGGACGAGCGTTTGCCCACGGTCCTTTCGCGAATCCGGGAGT
CGGGCGCCAAACTCTTTATGCTGACCAACAGCGACTATACGTACACCAAC
GAGATCATGACCTACCTGTTTGATTTCCCCCATGGCGCCACTCCGGATGA
GCCGCATCGCGACTGGAAGACCTACTTCGATGTGATCGTGGTGGATGCCC
GCAAGCCGCTCTTCTTCGACGAGGGCACCGTGCTGCGGCAGGTGGACACG
AAGACCGGAAGCCTGAAGATCGGCACACACGTTGGACCCCTGCAGCCGGG
TCAGGTTTATTCCGGTGGCTCCTGCGAGCTCTTTACCAAGTTCATCAATG
CCAAAGGCAAGGACGTGCTCTATGTGGGCGATCACATTTTTGGCGATATT
CTCAAATCGAAGAAGATTCGAGGCTGGCGCACCTTCCTAATTGTGCCCGA
ATTGGTGAGGGAGCTGCACGTTTGGACGGATGAGTGCCAGCTGTTTGCGG
AGCTACAGAACCTGGACATCAAGCTGGGCGACCTGTACAGGGATCTCGAC
TCGAGTGCCAAGGTCAAGCCGGACATTTCGCAGCTGCGCACGTGCATCCG
CGATGTGACACACAAGATGGACATGTCCTACGGTATGATGGGCTCACTCT
TCCGCTCCGGCTCGCGCCAGACCTTCTTCTCCAGCCAGGTGGTGCGATAT
GCCGACGTCTATGCGGCCACCCTGCTCAACCTCATTTACTACCCATTCTC
GTATATGTTCCGAGCTCCGGCCATGCTTCTGCCCCATGAGTCGACGGTGG
CCCATGATCAGGCCCATCAGCCGCCTCCGCCACTGGGCCCTGTTCCTGTT
CCGGCTACGGGAGCCGCATCGGTGGCTGCCTCGCCGGATGAGCCGGCTCG
CATTTTGGCGGGCACCGCCGAGCACGTTAAGGACCCCAAGGACTTGCATC
GCGCAAGCTCCATTGTGCACACTCGTCCGTCGACGCCCACCGTGGTGACC
CACACCCATGACGAGGACTATTCCGAGGAGGAGGAGACACCCAGTGGTGC
CGAGTCTTCCACAGAGGCTGTGCGCGATGCCTCCGAAGACGCAAGCTTTC
TAGACCAT

BO07834.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:58:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG32549-RH 2130 CG32549-PH 603..2127 16..1540 7625 100 Plus
CG32549-RG 2130 CG32549-PG 603..2127 16..1540 7625 100 Plus
CG32549-RF 1839 CG32549-PF 312..1836 16..1540 7625 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:58:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG32549-RH 2677 CG32549-RH 911..2435 16..1540 7625 100 Plus
CG32549-RG 2806 CG32549-RG 1040..2564 16..1540 7625 100 Plus
CG32549-RF 2652 CG32549-RF 828..2352 16..1540 7625 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:58:40
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18390998..18391968 1405..435 4855 100 Minus
X 23542271 X 18392549..18392701 168..16 765 100 Minus
X 23542271 X 18392335..18392481 315..169 735 100 Minus
X 23542271 X 18390798..18390932 1540..1406 675 100 Minus
X 23542271 X 18392040..18392161 436..315 610 100 Minus
Blast to na_te.dros performed on 2014-11-27 08:58:42 has no hits.

BO07834.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:14:26 Download gff for BO07834.complete
Subject Subject Range Query Range Percent Splice Strand
CG32549-RA 616..2148 11..1541 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:36:01 Download gff for BO07834.complete
Subject Subject Range Query Range Percent Splice Strand
CG32549-RC 57..1586 11..1540 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:14:38 Download gff for BO07834.complete
Subject Subject Range Query Range Percent Splice Strand
CG32549-RF 829..2352 17..1542 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:14:26 Download gff for BO07834.complete
Subject Subject Range Query Range Percent Splice Strand
CG32549-RC 57..1586 11..1540 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:29:53 Download gff for BO07834.complete
Subject Subject Range Query Range Percent Splice Strand
CG32549-RF 829..2352 17..1542 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:29:53 Download gff for BO07834.complete
Subject Subject Range Query Range Percent Splice Strand
X 18390796..18390932 1406..1542 98 <- Minus
X 18390998..18391966 437..1405 100 <- Minus
X 18392040..18392160 316..436 100 <- Minus
X 18392335..18392481 169..315 100 <- Minus
X 18392549..18392700 17..168 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:14:38 Download gff for BO07834.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18284829..18284965 1406..1542 98 <- Minus
arm_X 18285031..18285999 437..1405 100 <- Minus
arm_X 18286073..18286193 316..436 100 <- Minus
arm_X 18286368..18286514 169..315 100 <- Minus
arm_X 18286582..18286733 17..168 100   Minus

BO07834.pep Sequence

Translation from 16 to 1558

> BO07834.pep
MGYPKEILQFEYDPTFPVRGLWFDTLYGNLLKVDAYGNILVCVHGFEFIK
HHQVYELYPNKFLKLDESRVYVLNTLFNLPETYLLACLVDFLTNSSDFVR
VERGIKAGDLLFTYKSIFQDVRRAVDWVHSDGDLKRRTTQNMAHYVKKDE
RLPTVLSRIRESGAKLFMLTNSDYTYTNEIMTYLFDFPHGATPDEPHRDW
KTYFDVIVVDARKPLFFDEGTVLRQVDTKTGSLKIGTHVGPLQPGQVYSG
GSCELFTKFINAKGKDVLYVGDHIFGDILKSKKIRGWRTFLIVPELVREL
HVWTDECQLFAELQNLDIKLGDLYRDLDSSAKVKPDISQLRTCIRDVTHK
MDMSYGMMGSLFRSGSRQTFFSSQVVRYADVYAATLLNLIYYPFSYMFRA
PAMLLPHESTVAHDQAHQPPPPLGPVPVPATGAASVAASPDEPARILAGT
AEHVKDPKDLHRASSIVHTRPSTPTVVTHTHDEDYSEEEETPSGAESSTE
AVRDASEDASFLDH

BO07834.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:43:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG32549-PH 709 CG32549-PH 202..709 1..508 2689 100 Plus
CG32549-PG 709 CG32549-PG 202..709 1..508 2689 100 Plus
CG32549-PF 612 CG32549-PF 105..612 1..508 2689 100 Plus
CG32549-PB 612 CG32549-PB 105..612 1..508 2689 100 Plus
CG32549-PE 630 CG32549-PE 123..630 1..508 2689 100 Plus