Clone BO07864 Report

Search the DGRC for BO07864

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:78
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG3121-RA
Protein status:BO07864.pep: Imported from assembly
Sequenced Size:2158

Clone Sequence Records

BO07864.complete Sequence

2158 bp assembled on 2010-04-13

GenBank Submission: KX797684

> BO07864.complete
GAAGTTATCAGTCGACATGGACAGGGATTCCTGCCAAAATTTCTCATTAG
ACTCCACGAGCAGTTCCCATTTTGCTCCTCCGCCAGTTTGCGCGCCCAGA
AGGAAGAAGCCGGAGAAGCCCGCAGCTGAGGAGGCATCTCCCGAATGCTC
CAACGTCACATCGTCATCCTCGTCCTCGACAACCACCATATCCATAGGCG
CCTTCGATTCGCAATGCAACCTCCACAACGCCCGGAATCCCGAGGCCCCG
AACATTGGCTATGAGTTGAACGTGGCCAAGTCCATATTGCAGAAGTATAG
CACCCTCAGTGGGGACAACTTGTTCGATCATCTTAGTGACATCATAAAGA
GGGTGATTGACGAACGTCCTCCGAATGTGATAGACTTCTTCGAGGAATTT
AGCCGAAATGTTCGCGAACAGAAGTTCCACTTGCCAGAACGCTTTCCGCC
CAGTGGCGTGTTCGATGAGGTGCGATCTTTCCGGGTGGCCAAGAAAATTC
TCCAATCCATGAAGCTGCCCTATGTCGTTGAGGGTGAGGATCTGATGGGC
GAAGACCTGTCCGTCGAGGATTTGAGAACGAACGAGGATATGCGCATTGT
CATCGACGATTCCATGCGATACTTCGTCACATTCAACGAGCGAGTCCAGC
AGCTGCAGTTCTATTGGACACAGTGCGGATTTAGCATCAGCAACGACGAC
ATCTTCCAGCTGGCCAGCGCCATGAACCGGCTGCAGACGCATCCCTCGAT
CATGCAATGCAGATTCTGGGGCTGCATCAACGGACTGAAGGCCTCTTACT
ACATAGTGGAAGCTTCGCTCACCCGCGAGGAAATCGCCTCGCGCTTGGTC
ATGATGGAGGAAGAGATGCGGCAGAAGCAGATTCCGTTCCCGATGCGCAA
GGACAGGGAGGACAAGCCACCGCCGGCGCACATTGGGCCGGAGCTCACAC
CGGGCATCTATGGCTGGGAGGAATTTCCGCCTGAGGAGCTCGAGAAGATG
AAGCCCAAGGCTGCGCCCGTTCCCCTGGTGGAGGAGATGGAGCTCTACGA
CATTCCACCGGAGTTCATTGGCAAGGGCTGCAATAGGTACTCCTATTTCG
TTGTGAACTCGCTATTTGACGACTGGATCGAACTACCTATAGTGACCCCT
CGACAGATTGTCGTTTCGCGGCAGATCAAGAAGTTCCTAACAGGCGATCT
GGAGGCGGATGTCATATCCTACCCCTGCTTCCCTGGAAAGGAGAAACATT
ACCTACGGACTCTGATAGGTCGCATCACAGCGGGTACCTACATCGCTCCT
GTGGGCTACTACAGGCGCATGACCAAGAAGGAGCAGCGGATGTTCGATGG
CGAGGAAGAAGAAGAGGGCGAGGAGGAGGAGGAGGAAGAAGAGGAGGAGG
AGTTCAACGAAGGCGAGGAGGAGCAAATAGAAGATAACGACGTAATGCTT
TTGAAAAACGAGAAGTACGAGGCGGAACCACTGGGTTCTCTGGCCACCCC
GGTTGCTTGGGTTCATGTCAGGTCCAATATTCTGAACCAACAAGGCCGCG
TTGTCTGGTACGACGAGGAGAAGGCCCGCAAGGAGCGCGAAAAGGCACTG
GCCCTGTACCTGAAGATGCAGATGCTGGGCGAGATGGAAGAGGAGGTGGA
GGAGGAGGAGGATGAGGAAGAAGGCGAGGAGGAGGGCGAAGAAGAGGGCA
TGATCGAGGGCTTCAATCAGCCCGAACTGGGTCCCAGTATCCTCTCCTCC
TGTGCCAATGACATGAACCCCGAGGTGCCAGTTTCCTGGCTCGCCCGCAT
GACCAGCAAGTACACGAATCAGAAGGAGCGAATGCTCGTGATGCAGTCGA
ACGTCTGGCCAGGCGCCTACACGTTCATCTTTGAGAAGACCTGCGAGTCG
ATATACTTGGGCTGGGGCCACAAGTACTACGCCCGCAATATTCCCTTCAA
GCACTTGCCGATGGTGCAGGAGGAGTTCCCCCACAACCCAGAGGACTTCG
TCGAGGCCAACGATCCGACTGTCGAGGAGGAGGAAGCTTACAAGGCTTGG
CTCCTCCGGAAGCAGCAGAAGGCCGAGTATGTGGCCGAAGACATCGAAGA
CTACGATGATGACGAGTTCGCCGATCAGTATGACGACGACGCAAGCTTTC
TAGACCAT

BO07864.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:53:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG3121-RA 2127 CG3121-PA 1..2124 17..2140 10620 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:53:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG3121-RA 2284 CG3121-RA 94..2217 17..2140 10620 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:53:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24018149..24019069 513..1433 4605 100 Plus
2R 25286936 2R 24019121..24019829 1432..2140 3545 100 Plus
2R 25286936 2R 24017514..24017820 17..323 1535 100 Plus
2R 25286936 2R 24017901..24018093 322..514 965 100 Plus
Blast to na_te.dros performed on 2014-11-27 07:53:32 has no hits.

BO07864.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:25:20 Download gff for BO07864.complete
Subject Subject Range Query Range Percent Splice Strand
CG3121-RA 94..2217 17..2142 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:53:59 Download gff for BO07864.complete
Subject Subject Range Query Range Percent Splice Strand
CG3121-RA 94..2217 17..2142 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:06:47 Download gff for BO07864.complete
Subject Subject Range Query Range Percent Splice Strand
CG3121-RA 94..2217 17..2142 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:06:47 Download gff for BO07864.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24017514..24017818 17..321 100 -> Plus
2R 24017901..24018093 322..514 100 -> Plus
2R 24018151..24019069 515..1433 100 -> Plus
2R 24019123..24019829 1434..2142 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:53:59 Download gff for BO07864.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19905037..19905341 17..321 100 -> Plus
arm_2R 19905424..19905616 322..514 100 -> Plus
arm_2R 19905674..19906592 515..1433 100 -> Plus
arm_2R 19906646..19907352 1434..2142 99   Plus

BO07864.3prime Sequence

950 bp (855 high quality bases) assembled on 2006-01-06

> BO07864.3prime
ATGGTCTAGAAAGCTTGCGTCGTCGTCATACTGATCGGCGAACTCGTCAT
CATCGTAGTCTTCGATGTCTTCGGCCACATACTCGGCCTTCTGCTGCTTC
CGGAGGAGCCAAGCCTTGTAAGCTTCCTCCTCCTCGACAGTCGGATCGTT
GGCCTCGACGAAGTCCTCTGGGTTGTGGGGGAACTCCTCCTGCACCATCG
GCAAGTGCTTGAAGGGAATATTGCGGGCGTAGTACTTGTGGCCCCAGCCC
AAGTATATCGACTCGCAGGTCTTCTCAAAGATGAACGTGTAGGCGCCTGG
CCAGACGTTCGACTGCATCACGAGCATTCGCTCCTTCTGATTCGTGTACT
TGCTGGTCATGCGGGCGAGCCAGGAAACTGGCACCTCGGGGTTCATGTCA
TTGGCACAGGAGGAGAGGATACTGGGACCCAGTTCGGGCTGATTGAAGCC
CTCGATCATGCCCTCTTCTTCGCCCTCCTCCTCGCCTTCTTCCTCATCCT
CCTCCTCCTCCACCTCCTCTTCCATCTCGCCCAGCATCTGCATCTTCAGG
TACAGGGCCAGTGCCTTTTCGCGCTCCTTGCGGGCCTTCTCCTCGTCGTA
CCAGACAACGCGGCCTTGTTGGTTCAGAATATTGGACCTGACATGAACCC
AAGCAACCGGGGTGGCCAGAGAACCCAGTGGTTCCGCCTCGTACTTCTCG
TTTTTCAAAAGCATTACGTCGTTATCTTCTATTTGCTCCTCCTCGCCTTC
GTTGAACTCCTCCTCCTCTTCTTCCTCCTCCTCCTCCTCGCCCTCTTCTT
CTTCCTCGCCATCGAACATCCGCTGCTCCTTCTTGGTCATGCGCCTGTAG
TAGCCCACAGGAGCGATGTANGTACCCGCTGTGATGCGACCTATCAGAGT
CCGTAGGTAATGTTTCTCCTTTCCAGGGAAGCAGGGGTAGGATATGACAT

BO07864.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:12:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG3121-PA 2127 CG3121-RA 1193..2124 950..19 4641 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:02:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG3121-RA 2284 CG3121-RA 1286..2217 950..19 4649 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:02:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24019121..24019829 727..19 3545 100 Minus
2R 25286936 2R 24018845..24019069 950..726 1114 99.6 Minus
Blast to na_te.dros performed on 2015-02-13 00:02:10 has no hits.

BO07864.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:31:19 Download gff for BO07864.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3121-PA 1193..2127 16..950 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:18:53 Download gff for BO07864.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3121-PA 1193..2127 16..950 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:30:16 Download gff for BO07864.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3121-RA 1286..2223 11..950 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:39:44 Download gff for BO07864.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3121-RA 1286..2223 11..950 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:39:44 Download gff for BO07864.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 24018845..24019069 726..950 99 -> Minus
2R 24019123..24019835 11..725 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:30:16 Download gff for BO07864.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19906368..19906592 726..950 99 -> Minus
arm_2R 19906646..19907358 11..725 99   Minus

BO07864.5prime Sequence

872 bp (765 high quality bases) assembled on 2006-01-06

> BO07864.5prime
GAAGTTATCAGTCGACATGGACAGGGATTCCTGCCAAAATTTCTCATTAG
ACTCCACGAGCAGTTCCCATTTTGCTCCTCCGCCAGTTTGCGCGCCCAGA
AGGAAGAAGCCGGAGAAGCCCGCAGCTGAGGAGGCATCTCCCGAATGCTC
CAACGTCACATCGTCATCCTCGTCCTCGACAACCACCATATCCATAGGCG
CCTTCGATTCGCAATGCAACCTCCACAACGCCCGGAATCCCGAGGCCCCG
AACATTGGCTATGAGTTGAACGTGGCCAAGTCCATATTGCAGAAGTATAG
CACCCTCAGTGGGGACAACTTGTTCGATCATCTTAGTGACATCATAAAGA
GGGTGATTGACGAACGTCCTCCGAATGTGATAGACTTCTTCGAGGAATTT
AGCCGAAATGTTCGCGAACAGAAGTTCCACTTGCCAGAACGCTTTCCGCC
CAGTGGCGTGTTCGATGAGGTGCGATCTTTCCGGGTGGCCAAGAAAATTC
TCCAATCCATGAAGCTGCCCTATGTCGTTGAGGGTGAGGATCTGATGGGC
GAAGACCTGTCCGTCGAGGATTTGAGAACGAACGAGGATATGCGCATTGT
CATCGACGATTCCATGCGATACTTCGTCACATTCAACGAGCGAGTCCAGC
AGCTGCAGTTCTATTGGACACAGTGCGGATTTAGCATCAGCAACGACGAC
ATCTTCCAGCTGGCCAGCGCCATGAACCGGCTGCAGACGCATCCCTCGAT
CATGCAATGCAGATTCTGGGGCTGCATCAACGGACTGAAGGCCTCTTACT
ACATAGTGGAAGCTTCGCTCACCCGCGAGGAAATCGCCTCGCGCTTGGTC
ATGATGGAGGAAGAGATGCGGC

BO07864.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:12:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG3121-PA 2127 CG3121-RA 1..856 17..872 4280 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:07:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG3121-RA 2284 CG3121-RA 94..949 17..872 4280 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:07:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24018149..24018508 513..872 1800 100 Plus
2R 25286936 2R 24017514..24017820 17..323 1535 100 Plus
2R 25286936 2R 24017901..24018093 322..514 965 100 Plus
Blast to na_te.dros performed on 2015-02-12 10:07:14 has no hits.

BO07864.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:31:20 Download gff for BO07864.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3121-PA 1..856 17..872 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:18:54 Download gff for BO07864.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3121-PA 1..856 17..872 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:46:44 Download gff for BO07864.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3121-RA 87..949 9..872 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:05:12 Download gff for BO07864.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3121-RA 87..949 9..872 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:05:12 Download gff for BO07864.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 24017507..24017818 9..321 99 -> Plus
2R 24017901..24018093 322..514 100 -> Plus
2R 24018151..24018508 515..872 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:46:44 Download gff for BO07864.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19905030..19905341 9..321 99 -> Plus
arm_2R 19905424..19905616 322..514 100 -> Plus
arm_2R 19905674..19906031 515..872 100   Plus

BO07864.pep Sequence

Translation from 16 to 2158

> BO07864.pep
MDRDSCQNFSLDSTSSSHFAPPPVCAPRRKKPEKPAAEEASPECSNVTSS
SSSSTTTISIGAFDSQCNLHNARNPEAPNIGYELNVAKSILQKYSTLSGD
NLFDHLSDIIKRVIDERPPNVIDFFEEFSRNVREQKFHLPERFPPSGVFD
EVRSFRVAKKILQSMKLPYVVEGEDLMGEDLSVEDLRTNEDMRIVIDDSM
RYFVTFNERVQQLQFYWTQCGFSISNDDIFQLASAMNRLQTHPSIMQCRF
WGCINGLKASYYIVEASLTREEIASRLVMMEEEMRQKQIPFPMRKDREDK
PPPAHIGPELTPGIYGWEEFPPEELEKMKPKAAPVPLVEEMELYDIPPEF
IGKGCNRYSYFVVNSLFDDWIELPIVTPRQIVVSRQIKKFLTGDLEADVI
SYPCFPGKEKHYLRTLIGRITAGTYIAPVGYYRRMTKKEQRMFDGEEEEE
GEEEEEEEEEEEFNEGEEEQIEDNDVMLLKNEKYEAEPLGSLATPVAWVH
VRSNILNQQGRVVWYDEEKARKEREKALALYLKMQMLGEMEEEVEEEEDE
EEGEEEGEEEGMIEGFNQPELGPSILSSCANDMNPEVPVSWLARMTSKYT
NQKERMLVMQSNVWPGAYTFIFEKTCESIYLGWGHKYYARNIPFKHLPMV
QEEFPHNPEDFVEANDPTVEEEEAYKAWLLRKQQKAEYVAEDIEDYDDDE
FADQYDDDASFLDH

BO07864.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:36:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG3121-PA 708 CG3121-PA 1..708 1..708 3757 100 Plus