Clone BO07922 Report

Search the DGRC for BO07922

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:79
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG14521-RA
Protein status:BO07922.pep: validated full length
Sequenced Size:1273

Clone Sequence Records

BO07922.3prime Sequence

955 bp (855 high quality bases) assembled on 2006-01-06

> BO07922.3prime
ATGGTCTAGAAAGCTTGCCGCTCCCCCGGTTCTCAGACTCAGCCTCATCC
ACAGAAGCATCAGCATGGCGAGCAGGGGCTGCCACGTCGTCCGGTTGCTC
CTGCCCGCATTCCGAGCAGCCTCCTCGAGACCTCCGATGTAATTCAGATG
ATCATCGTTGCTGGCGGAGGCGCCCGGATGAAGCTTGATTTCGTATAACC
GCAATGTGCCCTCGGCACGGCCCAGCGAGTTTGTGCTGACGCAGTGATAG
GTGCCCACATCGGAGGGCGAGAAGGAACGCACCACCAGCAGCATGACGCC
CCGATAGCCATCGCGGCGCTCCGTTATCCCGTACTTGGGCCCGTCGAGCA
GCATTTCGGGACCCGGCGAGCCGGACTCCAGGCTGGCCGTGGAGACGCTG
GCGAATCCGTTGGACGTCCGCGCCCCCTTCAGCCAGTAGGAGACGGGCGA
CGGCGAGGCCTCCACCTGGCATTCCAGCTGCACATCGGATCCCAAGGGCG
TGCCCAGGAGCTGGCTGGGGGCCCTCACCATGGGAGCAAATTGCACACTC
AGCGAGACTCGTTTGCTGACGGCAGGTGGAACATCGTTGGATGCTATACA
CAAGTAGGCGCCCATCTGACGCCTCTCCAGGCGGAGCAGCCTGAGCGAGG
ATCCATTATAGGACTCCACTTTCATGAGCTCCCTACTGCCTGGCTTGCGA
ATGAGTATCATTTCGCCGTCCTCCCTGCGCCAAGTGACCCTTGGCTGGGG
ATTTCCCGTGGCTTTGCAGGTGAGCGTGGCATCCTCGCCCTCCTGGACGG
CCAGATCGGCGGATGACTCTTCGTTGATGATATCCGGTGGTACCTGCACA
TCGATACAACCCACTTGTTTTCTCATGGGACTCGTATTATTTTGGACATA
TAGCAGCCGCGGTCACTTTCCCGCAGTTTGCTGATTTTTAGTTTCCATGT
GTGCA

BO07922.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:13:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14521-PA 1242 CG14521-RA 370..1239 888..19 4300 99.7 Minus
CG14521-PA 1242 CG14521-RA 302..361 955..896 300 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 17:46:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG14521-RA 3105 CG14521-RA 1682..2619 955..19 4605 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 17:45:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28926166..28926365 340..539 1000 100 Plus
3R 32079331 3R 28926898..28927072 669..843 875 100 Plus
3R 32079331 3R 28925913..28926062 192..341 750 100 Plus
3R 32079331 3R 28926717..28926847 540..670 655 100 Plus
3R 32079331 3R 28925490..28925604 19..133 575 100 Plus
3R 32079331 3R 28927135..28927241 843..948 425 95.3 Plus
3R 32079331 3R 28925740..28925802 130..192 315 100 Plus
Blast to na_te.dros performed on 2015-02-11 17:45:56 has no hits.

BO07922.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:32:39 Download gff for BO07922.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14521-PA 303..1242 16..954 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:20:49 Download gff for BO07922.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14521-PA 303..1242 16..954 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:45:09 Download gff for BO07922.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14521-RA 1683..2619 19..954 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:30:55 Download gff for BO07922.3prime
Subject Subject Range Query Range Percent Splice Strand
CG14521-RA 1683..2619 19..954 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:30:55 Download gff for BO07922.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 28926898..28927071 669..842 100 <- Plus
3R 28927135..28927244 843..954 92   Plus
3R 28925490..28925602 19..131 100 <- Plus
3R 28925742..28925801 132..191 100 <- Plus
3R 28925913..28926061 192..340 100 <- Plus
3R 28926167..28926365 341..539 100 <- Plus
3R 28926717..28926845 540..668 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:45:09 Download gff for BO07922.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24751212..24751324 19..131 100 <- Plus
arm_3R 24751464..24751523 132..191 100 <- Plus
arm_3R 24751635..24751783 192..340 100 <- Plus
arm_3R 24751889..24752087 341..539 100 <- Plus
arm_3R 24752439..24752567 540..668 100 <- Plus
arm_3R 24752620..24752793 669..842 100 <- Plus
arm_3R 24752857..24752966 843..954 92   Plus

BO07922.5prime Sequence

866 bp (854 high quality bases) assembled on 2006-01-06

> BO07922.5prime
GAAGTTATCAGTCGACATGGAGAAGCTGCTGCAATCGACGCTGTTTGTCA
TCCTGATAATGGCCACAAAATGCGGCAGTGGCTCGACCCAGAACCAGCAT
CACGAGAGCAGTTCCCAGCTGGATCCCGATCCGGAGTTCATAGGGTTCAT
CAACAACGTCACATATCCGGCAGGACGCGAGGCCATCCTGGCCTGCTCGG
TGCGCAATCTCGGCAAGAATAAGGTTGGTTGGCTGAGAGCCTCCGATCAG
ACCGTTTTAGCTCTCCAAGGTCGCGTTGTCACCCATAATGCGAGAATCAG
CGTCATGCATCAGGATATGCACACATGGAAACTAAAAATCAGCAAACTGC
GGGAAAGTGACCGCGGCTGCTATATGTGCCAAATAAATACGAGTCCCATG
AAGAAACAAGTGGGTTGTATCGATGTGCAGGTACCACCGGATATCATCAA
CGAAGAGTCATCCGCCGATCTGGCCGTCCAGGAGGGCGAGGATGCCACGC
TCACCTGCAAAGCCACGGGAAATCCCCAGCCAAGGGTCACTTGGCGCAGG
GAGGACGGCGAAATGATACTCATTCGCAAGCCAGGCAGTAGGGAGCTCAT
GAAAGTGGAGTCCTATAATGGATCCTCGCTCAGGCTGCTCCGCCTGGAGA
GGCGTCAGATGGGCGCCTACTTGTGTATAGCATCCAACGATGTTCCACCT
GCCGTCAGCAAACGAGTCTCGCTGAGTGTGCAATTTGCTCCCATGGTGAG
GGCCCCCAGCCAGCTCCTGGGCACGCCCTTGGGATCCGATGTGCAGCTGG
AATGCCAGGTGGAGGCCTCGCCGTCGCCCGTCTCCTACTGGCTGAAGGGG
GCGCGGACGTCCAACG

BO07922.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:13:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG14521-PA 1242 CG14521-RA 1..850 17..866 4250 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:10:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG14521-RA 3105 CG14521-RA 1381..2230 17..866 4250 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:10:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28926898..28927072 605..431 875 100 Minus
3R 32079331 3R 28926234..28926365 866..735 660 100 Minus
3R 32079331 3R 28926717..28926847 734..604 655 100 Minus
3R 32079331 3R 28927475..28927596 225..104 610 100 Minus
3R 32079331 3R 28927135..28927241 431..325 535 100 Minus
3R 32079331 3R 28927310..28927412 324..222 515 100 Minus
3R 32079331 3R 28927684..28927771 104..17 440 100 Minus
Blast to na_te.dros performed on 2015-02-13 00:10:07 has no hits.

BO07922.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:32:40 Download gff for BO07922.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14521-PA 1..850 17..866 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:20:50 Download gff for BO07922.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14521-PA 1..850 17..866 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:30:51 Download gff for BO07922.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14521-RA 1374..2230 9..866 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:40:59 Download gff for BO07922.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14521-RA 1374..2230 9..866 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:40:59 Download gff for BO07922.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 28926234..28926365 735..866 100 <- Minus
3R 28926717..28926845 606..734 100 <- Minus
3R 28926898..28927071 432..605 100 <- Minus
3R 28927135..28927241 325..431 100 <- Minus
3R 28927310..28927410 224..324 100 <- Minus
3R 28927477..28927595 105..223 100 <- Minus
3R 28927684..28927778 9..104 95   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:30:51 Download gff for BO07922.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24753406..24753500 9..104 95   Minus
arm_3R 24751956..24752087 735..866 100 <- Minus
arm_3R 24752439..24752567 606..734 100 <- Minus
arm_3R 24752620..24752793 432..605 100 <- Minus
arm_3R 24752857..24752963 325..431 100 <- Minus
arm_3R 24753032..24753132 224..324 100 <- Minus
arm_3R 24753199..24753317 105..223 100 <- Minus

BO07922.complete Sequence

1273 bp (1273 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ630987

> BO07922.complete
GAAGTTATCAGTCGACATGGAGAAGCTGCTGCAATCGACGCTGTTTGTCA
TCCTGATAATGGCCACAAAATGCGGCAGTGGCTCGACCCAGAACCAGCAT
CACGAGAGCAGTTCCCAGCTGGATCCCGATCCGGAGTTCATAGGGTTCAT
CAACAACGTCACATATCCGGCAGGACGCGAGGCCATCCTGGCCTGCTCGG
TGCGCAATCTCGGCAAGAATAAGGTTGGTTGGCTGAGAGCCTCCGATCAG
ACCGTTTTAGCTCTCCAAGGTCGCGTTGTCACCCATAATGCGAGAATCAG
CGTCATGCATCAGGATATGCACACATGGAAACTAAAAATCAGCAAACTGC
GGGAAAGTGACCGCGGCTGCTATATGTGCCAAATAAATACGAGTCCCATG
AAGAAACAAGTGGGTTGTATCGATGTGCAGGTACCACCGGATATCATCAA
CGAAGAGTCATCCGCCGATCTGGCCGTCCAGGAGGGCGAGGATGCCACGC
TCACCTGCAAAGCCACGGGAAATCCCCAGCCAAGGGTCACTTGGCGCAGG
GAGGACGGCGAAATGATACTCATTCGCAAGCCAGGCAGTAGGGAGCTCAT
GAAAGTGGAGTCCTATAATGGATCCTCGCTCAGGCTGCTCCGCCTGGAGA
GGCGTCAGATGGGCGCCTACTTGTGTATAGCATCCAACGATGTTCCACCT
GCCGTCAGCAAACGAGTCTCGCTGAGTGTGCAATTTGCTCCCATGGTGAG
GGCCCCCAGCCAGCTCCTGGGCACGCCCTTGGGATCCGATGTGCAGCTGG
AATGCCAGGTGGAGGCCTCGCCGTCGCCCGTCTCCTACTGGCTGAAGGGG
GCGCGGACGTCCAACGGATTCGCCAGCGTCTCCACGGCCAGCCTGGAGTC
CGGCTCGCCGGGTCCCGAAATGCTGCTCGACGGGCCCAAGTACGGGATAA
CGGAGCGCCGCGATGGCTATCGGGGCGTCATGCTGCTGGTGGTGCGTTCC
TTCTCGCCCTCCGATGTGGGCACCTATCACTGCGTCAGCACAAACTCGCT
GGGCCGTGCCGAGGGCACATTGCGGTTATACGAAATCAAGCTTCATCCGG
GCGCCTCCGCCAGCAACGATGATCATCTGAATTACATCGGAGGTCTCGAG
GAGGCTGCTCGGAATGCGGGCAGGAGCAACCGGACGACGTGGCAGCCCCT
GCTCGCCATGCTGATGCTTCTGTGGATGAGGCTGAGTCTGAGAACCGGGG
GAGCGGCAAGCTTTCTAGACCAT

BO07922.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:51:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG14521-RA 1242 CG14521-PA 1..1239 17..1255 6195 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:51:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14521-RA 3105 CG14521-RA 1381..2619 17..1255 6195 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:51:27
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28926166..28926365 934..735 1000 100 Minus
3R 32079331 3R 28926898..28927072 605..431 875 100 Minus
3R 32079331 3R 28925913..28926062 1082..933 750 100 Minus
3R 32079331 3R 28926717..28926847 734..604 655 100 Minus
3R 32079331 3R 28927475..28927596 225..104 610 100 Minus
3R 32079331 3R 28925490..28925604 1255..1141 575 100 Minus
3R 32079331 3R 28927135..28927241 431..325 535 100 Minus
3R 32079331 3R 28927310..28927412 324..222 515 100 Minus
3R 32079331 3R 28927684..28927771 104..17 440 100 Minus
3R 32079331 3R 28925740..28925802 1144..1082 315 100 Minus
Blast to na_te.dros performed on 2014-11-27 12:51:29 has no hits.

BO07922.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:14:09 Download gff for BO07922.complete
Subject Subject Range Query Range Percent Splice Strand
CG14521-RA 1..1242 17..1258 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:35:30 Download gff for BO07922.complete
Subject Subject Range Query Range Percent Splice Strand
CG14521-RA 1356..2601 9..1255 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 11:38:11 Download gff for BO07922.complete
Subject Subject Range Query Range Percent Splice Strand
CG14521-RA 1381..2619 17..1257 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:14:09 Download gff for BO07922.complete
Subject Subject Range Query Range Percent Splice Strand
CG14521-RA 1356..2601 9..1255 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:06:11 Download gff for BO07922.complete
Subject Subject Range Query Range Percent Splice Strand
CG14521-RA 1381..2619 17..1257 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:06:11 Download gff for BO07922.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28927310..28927410 224..324 100 <- Minus
3R 28927477..28927595 105..223 100 <- Minus
3R 28925487..28925602 1143..1257 98 <- Minus
3R 28925742..28925801 1083..1142 100 <- Minus
3R 28927684..28927771 17..104 100   Minus
3R 28925913..28926061 934..1082 100 <- Minus
3R 28926167..28926365 735..933 100 <- Minus
3R 28926717..28926845 606..734 100 <- Minus
3R 28926898..28927071 432..605 100 <- Minus
3R 28927135..28927241 325..431 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 11:38:11 Download gff for BO07922.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24751209..24751324 1143..1257 98 <- Minus
arm_3R 24751464..24751523 1083..1142 100 <- Minus
arm_3R 24751635..24751783 934..1082 100 <- Minus
arm_3R 24751889..24752087 735..933 100 <- Minus
arm_3R 24752439..24752567 606..734 100 <- Minus
arm_3R 24752620..24752793 432..605 100 <- Minus
arm_3R 24752857..24752963 325..431 100 <- Minus
arm_3R 24753032..24753132 224..324 100 <- Minus
arm_3R 24753199..24753317 105..223 100 <- Minus
arm_3R 24753406..24753493 17..104 100   Minus

BO07922.pep Sequence

Translation from 16 to 1273

> BO07922.pep
MEKLLQSTLFVILIMATKCGSGSTQNQHHESSSQLDPDPEFIGFINNVTY
PAGREAILACSVRNLGKNKVGWLRASDQTVLALQGRVVTHNARISVMHQD
MHTWKLKISKLRESDRGCYMCQINTSPMKKQVGCIDVQVPPDIINEESSA
DLAVQEGEDATLTCKATGNPQPRVTWRREDGEMILIRKPGSRELMKVESY
NGSSLRLLRLERRQMGAYLCIASNDVPPAVSKRVSLSVQFAPMVRAPSQL
LGTPLGSDVQLECQVEASPSPVSYWLKGARTSNGFASVSTASLESGSPGP
EMLLDGPKYGITERRDGYRGVMLLVVRSFSPSDVGTYHCVSTNSLGRAEG
TLRLYEIKLHPGASASNDDHLNYIGGLEEAARNAGRSNRTTWQPLLAMLM
LLWMRLSLRTGGAASFLDH

BO07922.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:49:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG14521-PA 413 CG14521-PA 1..413 1..413 2139 100 Plus
CG32791-PC 554 CG32791-PC 42..340 39..357 783 46.4 Plus
CG32791-PA 554 CG32791-PA 42..340 39..357 783 46.4 Plus
CG42343-PG 534 CG42343-PG 87..402 38..374 766 44.4 Plus
CG42343-PF 555 CG42343-PF 97..423 38..374 747 43.3 Plus