Clone Sequence Records
BO07924.3prime Sequence
716 bp (715 high quality bases) assembled on 2006-01-06
> BO07924.3prime
ATGGTCTAGAAAGCTTGCGTCCCGGATGAAGACGAACTCATTGTAGTGGT
TCCAGCGATTTTCCTCTGTGTCCACGCCCGGCTTGGGTTCCGCTGCCGAG
CCGGCAGTTCCGGATCCGCAGCTTCCGGCCATGCGGTATCCGTGGTCGTG
CAGATTGTCGAAAGCCTGCTCGATGTAGCAGTGCTTCAGGAAGAACCGCG
AGGTGTACCGATCCGTGCCACCATGATCCGGATCCCGGGACTCGTTCAGC
GTATCGCCGAACACCTCGCGGCACTGGGCCACTCGGCCGCAGACCAGGAT
GCGCGACAGCTTCCGGAACTTAACGTCGGCCAGTCCGTCTTTGCCGAACT
GGAAGCTGCCACGGTAACCGATGGTGATGCATCCGGGTGGTCGAGCGTCC
CGCTCGCTGCGGATGCACTCGAGCATGGCGGTCAGCTTAAAGTGCTCCGC
CTCCCGCAGCAGCCGCTGTCGCTCGCGGAATCCTTCGGGAAGGTGCAGCG
CCTTGTCGCGCAGGAAGTCCAGGATGTAGCGGAAGAGGACGCCGTCACGG
TCCAGGAAGTAGCGACCCTTGCTGTCCTTGGCCAGCGAATCGCGACCCTC
GCCAAAGAGTTCCGCCAGCAGCGTGCTCTTATCCTGCAGCAGTGTGGCCA
GTGTGGTCGTGTAGCTCACGCCGCCGACGTTCAGCTCGATGATTTCGGGC
ATGTCGACTGATAACT
BO07924.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:13:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10830-PA | 687 | CG10830-RA | 1..684 | 702..19 | 3420 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:25:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10830-RA | 2869 | CG10830-RA | 184..868 | 703..19 | 3425 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 00:25:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20896453..20897137 | 19..703 | 3425 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 00:25:51 has no hits.
BO07924.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:32:43 Download gff for
BO07924.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10830-PA | 1..687 | 18..702 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:20:54 Download gff for
BO07924.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10830-PA | 1..687 | 18..702 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 11:49:42 Download gff for
BO07924.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10830-RA | 177..877 | 12..710 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 02:05:19 Download gff for
BO07924.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10830-RA | 177..877 | 12..710 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 02:05:19 Download gff for
BO07924.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20896444..20897140 | 12..710 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 11:49:42 Download gff for
BO07924.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16722166..16722862 | 12..710 | 99 | | Plus |
BO07924.5prime Sequence
716 bp (715 high quality bases) assembled on 2006-01-06
> BO07924.5prime
GAAGTTATCAGTCGACATGCCCGAAATCATCGAGCTGAACGTCGGCGGCG
TGAGCTACACGACCACACTGGCCACACTGCTGCAGGATAAGAGCACGCTG
CTGGCGGAACTCTTTGGCGAGGGTCGCGATTCGCTGGCCAAGGACAGCAA
GGGTCGCTACTTCCTGGACCGTGACGGCGTCCTCTTCCGCTACATCCTGG
ACTTCCTGCGCGACAAGGCGCTGCACCTTCCCGAAGGATTCCGCGAGCGA
CAGCGGCTGCTGCGGGAGGCGGAGCACTTTAAGCTGACCGCCATGCTCGA
GTGCATCCGCAGCGAGCGGGACGCTCGACCACCCGGATGCATCACCATCG
GTTACCGTGGCAGCTTCCAGTTCGGCAAAGACGGACTGGCCGACGTTAAG
TTCCGGAAGCTGTCGCGCATCCTGGTCTGCGGCCGAGTGGCCCAGTGCCG
CGAGGTGTTCGGCGATACGCTGAACGAGTCCCGGGATCCGGATCATGGTG
GCACGGATCGGTACACCTCGCGGTTCTTCCTGAAGCACTGCTACATCGAG
CAGGCTTTCGACAATCTGCACGACCACGGATACCGCATGGCCGGAAGCTG
CGGATCCGGAACTGCCGGCTCGGCAGCGGAACCCAAGCCGGGCGTGGACA
CAGAGGAAAATCGCTGGAACCACTACAATGAGTTCGTCTTCATCCGGGAC
GCAAGCTTTCTAGACC
BO07924.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:13:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10830-PA | 687 | CG10830-RA | 1..684 | 17..700 | 3420 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:07:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10830-RA | 2869 | CG10830-RA | 184..868 | 16..700 | 3425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:07:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20896453..20897137 | 700..16 | 3425 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-12 10:07:58 has no hits.
BO07924.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:32:44 Download gff for
BO07924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10830-PA | 1..687 | 17..701 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:20:55 Download gff for
BO07924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10830-PA | 1..687 | 17..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:46:50 Download gff for
BO07924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10830-RA | 177..877 | 9..707 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:06:25 Download gff for
BO07924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10830-RA | 177..877 | 9..707 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:06:25 Download gff for
BO07924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20896444..20897140 | 9..707 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:46:50 Download gff for
BO07924.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16722166..16722862 | 9..707 | 99 | | Minus |
BO07924.complete Sequence
718 bp (718 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630989
> BO07924.complete
GAAGTTATCAGTCGACATGCCCGAAATCATCGAGCTGAACGTCGGCGGCG
TGAGCTACACGACCACACTGGCCACACTGCTGCAGGATAAGAGCACGCTG
CTGGCGGAACTCTTTGGCGAGGGTCGCGATTCGCTGGCCAAGGACAGCAA
GGGTCGCTACTTCCTGGACCGTGACGGCGTCCTCTTCCGCTACATCCTGG
ACTTCCTGCGCGACAAGGCGCTGCACCTTCCCGAAGGATTCCGCGAGCGA
CAGCGGCTGCTGCGGGAGGCGGAGCACTTTAAGCTGACCGCCATGCTCGA
GTGCATCCGCAGCGAGCGGGACGCTCGACCACCCGGATGCATCACCATCG
GTTACCGTGGCAGCTTCCAGTTCGGCAAAGACGGACTGGCCGACGTTAAG
TTCCGGAAGCTGTCGCGCATCCTGGTCTGCGGCCGAGTGGCCCAGTGCCG
CGAGGTGTTCGGCGATACGCTGAACGAGTCCCGGGATCCGGATCATGGTG
GCACGGATCGGTACACCTCGCGGTTCTTCCTGAAGCACTGCTACATCGAG
CAGGCTTTCGACAATCTGCACGACCACGGATACCGCATGGCCGGAAGCTG
CGGATCCGGAACTGCCGGCTCGGCAGCGGAACCCAAGCCGGGCGTGGACA
CAGAGGAAAATCGCTGGAACCACTACAATGAGTTCGTCTTCATCCGGGAC
GCAAGCTTTCTAGACCAT
BO07924.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:50:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10830-RA | 687 | CG10830-PA | 1..684 | 17..700 | 3420 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:50:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10830-RA | 2869 | CG10830-RA | 184..868 | 16..700 | 3425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:50:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20896453..20897137 | 700..16 | 3425 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:50:56 has no hits.
BO07924.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:00:43 Download gff for
BO07924.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10830-RA | 1..687 | 17..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:32:51 Download gff for
BO07924.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10830-RA | 177..871 | 9..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:33:43 Download gff for
BO07924.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10830-RA | 185..868 | 17..702 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:00:44 Download gff for
BO07924.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10830-RA | 177..871 | 9..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:54:03 Download gff for
BO07924.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10830-RA | 185..868 | 17..702 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:54:03 Download gff for
BO07924.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20896451..20897136 | 17..702 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:33:43 Download gff for
BO07924.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16722173..16722858 | 17..702 | 99 | | Minus |
BO07924.pep Sequence
Translation from 16 to 718
> BO07924.pep
MPEIIELNVGGVSYTTTLATLLQDKSTLLAELFGEGRDSLAKDSKGRYFL
DRDGVLFRYILDFLRDKALHLPEGFRERQRLLREAEHFKLTAMLECIRSE
RDARPPGCITIGYRGSFQFGKDGLADVKFRKLSRILVCGRVAQCREVFGD
TLNESRDPDHGGTDRYTSRFFLKHCYIEQAFDNLHDHGYRMAGSCGSGTA
GSAAEPKPGVDTEENRWNHYNEFVFIRDASFLDH
BO07924.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:46:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10830-PA | 228 | CG10830-PA | 1..228 | 1..228 | 1214 | 100 | Plus |
| CG10440-PA | 338 | CG10440-PA | 108..207 | 5..104 | 172 | 38.6 | Plus |
| CG10440-PB | 367 | CG10440-PB | 137..236 | 5..104 | 172 | 38.6 | Plus |
| CG10465-PA | 301 | CG10465-PA | 19..115 | 3..99 | 159 | 38.8 | Plus |
