Clone Sequence Records
BO07937.5prime Sequence
374 bp (373 high quality bases) assembled on 2006-01-06
> BO07937.5prime
GAAGTTATCAGTCGACATGGTGAAGACGTTTCAGGCCTATCTACCGTCCA
CGAATCGGACATACTCATGTGTTCACTGCCGCGCCCACCTCGCCTCCCAC
GACGAGCTCATATCGAAGTCGTTTCAGGGCAGTCAGGGACCGGCCTATCT
GTTCAACTCGGTGGTGAACGTGGCCTGTGGCCAGACGGAGGAGCGTGTGC
TCCTGACCGGCCTCCATGCGGTGGCGGACATCTACTGCGAGTGCTGCAAG
ACGCCGCTGGGCTGGAAATATGAGCACGCCTATGAGTCCAGCCAAAAGTA
CAAGGAGGGCAAGTTCATCATTGAGCTGGCGCACATGATCAAGGAGAACG
GCTGGGACGCAAGCTTTCTAGACC
BO07937.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:13:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15309-PA | 345 | CG15309-RA | 1..342 | 17..358 | 1710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:36:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15309-RE | 3058 | CG15309-RE | 775..1116 | 17..358 | 1710 | 100 | Plus |
| CG15309-RD | 2877 | CG15309-RD | 594..935 | 17..358 | 1710 | 100 | Plus |
| CG15309-RC | 2606 | CG15309-RC | 323..664 | 17..358 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:36:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10207234..10207575 | 358..17 | 1710 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 17:36:44 has no hits.
BO07937.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:33:10 Download gff for
BO07937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15309-PA | 1..345 | 17..361 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:21:30 Download gff for
BO07937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15309-PA | 1..345 | 17..361 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:09:43 Download gff for
BO07937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15309-RC | 317..669 | 11..363 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:28:46 Download gff for
BO07937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15309-RC | 317..669 | 11..363 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:28:46 Download gff for
BO07937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10207229..10207581 | 11..363 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:09:43 Download gff for
BO07937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10101262..10101614 | 11..363 | 98 | | Minus |
BO07937.3prime Sequence
374 bp (373 high quality bases) assembled on 2006-01-06
> BO07937.3prime
ATGGTCTAGAAAGCTTGCGTCCCAGCCGTTCTCCTTGATCATGTGCGCCA
GCTCAATGATGAACTTGCCCTCCTTGTACTTTTGGCTGGACTCATAGGCG
TGCTCATATTTCCAGCCCAGCGGCGTCTTGCAGCACTCGCAGTAGATGTC
CGCCACCGCATGGAGGCCGGTCAGGAGCACACGCTCCTCCGTCTGGCCAC
AGGCCACGTTCACCACCGAGTTGAACAGATAGGCCGGTCCCTGACTGCCC
TGAAACGACTTCGATATGAGCTCGTCGTGGGAGGCGAGGTGGGCGCGGCA
GTGAACACATGAGTATGTCCGATTCGTGGACGGTAGATAGGCCTGAAACG
TCTTCACCATGTCGACTGATAACT
BO07937.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:13:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15309-PA | 345 | CG15309-RA | 1..342 | 360..19 | 1710 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:28:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15309-RE | 3058 | CG15309-RE | 775..1116 | 360..19 | 1710 | 100 | Minus |
| CG15309-RD | 2877 | CG15309-RD | 594..935 | 360..19 | 1710 | 100 | Minus |
| CG15309-RC | 2606 | CG15309-RC | 323..664 | 360..19 | 1710 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:28:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10207234..10207575 | 19..360 | 1710 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 13:28:06 has no hits.
BO07937.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:33:09 Download gff for
BO07937.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15309-PA | 1..345 | 16..360 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:21:28 Download gff for
BO07937.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15309-PA | 1..345 | 16..360 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:09:10 Download gff for
BO07937.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15309-RC | 317..669 | 14..366 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:03:17 Download gff for
BO07937.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15309-RC | 317..669 | 14..366 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:03:17 Download gff for
BO07937.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10207229..10207581 | 14..366 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:09:10 Download gff for
BO07937.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10101262..10101614 | 14..366 | 98 | | Plus |
BO07937.complete Sequence
376 bp (376 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ630991
> BO07937.complete
GAAGTTATCAGTCGACATGGTGAAGACGTTTCAGGCCTATCTACCGTCCA
CGAATCGGACATACTCATGTGTTCACTGCCGCGCCCACCTCGCCTCCCAC
GACGAGCTCATATCGAAGTCGTTTCAGGGCAGTCAGGGACCGGCCTATCT
GTTCAACTCGGTGGTGAACGTGGCCTGTGGCCAGACGGAGGAGCGTGTGC
TCCTGACCGGCCTCCATGCGGTGGCGGACATCTACTGCGAGTGCTGCAAG
ACGCCGCTGGGCTGGAAATATGAGCACGCCTATGAGTCCAGCCAAAAGTA
CAAGGAGGGCAAGTTCATCATTGAGCTGGCGCACATGATCAAGGAGAACG
GCTGGGACGCAAGCTTTCTAGACCAT
BO07937.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:49:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15309-RE | 345 | CG15309-PE | 1..342 | 17..358 | 1710 | 100 | Plus |
| CG15309-RD | 345 | CG15309-PD | 1..342 | 17..358 | 1710 | 100 | Plus |
| CG15309-RC | 345 | CG15309-PC | 1..342 | 17..358 | 1710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:49:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15309-RE | 3058 | CG15309-RE | 775..1116 | 17..358 | 1710 | 100 | Plus |
| CG15309-RD | 2877 | CG15309-RD | 594..935 | 17..358 | 1710 | 100 | Plus |
| CG15309-RC | 2606 | CG15309-RC | 323..664 | 17..358 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:49:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10207234..10207575 | 358..17 | 1710 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:49:15 has no hits.
BO07937.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:01:03 Download gff for
BO07937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15309-RB | 1..345 | 17..361 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:33:13 Download gff for
BO07937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15309-RB | 908..1260 | 11..363 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:33:25 Download gff for
BO07937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15309-RC | 323..664 | 17..360 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:01:04 Download gff for
BO07937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15309-RB | 908..1260 | 11..363 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:53:27 Download gff for
BO07937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15309-RC | 323..664 | 17..360 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:53:27 Download gff for
BO07937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10207231..10207575 | 17..360 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:33:25 Download gff for
BO07937.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10101264..10101608 | 17..360 | 99 | | Minus |
BO07937.pep Sequence
Translation from 16 to 376
> BO07937.pep
MVKTFQAYLPSTNRTYSCVHCRAHLASHDELISKSFQGSQGPAYLFNSVV
NVACGQTEERVLLTGLHAVADIYCECCKTPLGWKYEHAYESSQKYKEGKF
IIELAHMIKENGWDASFLDH
BO07937.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:46:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15309-PE | 114 | CG15309-PE | 1..114 | 1..114 | 623 | 100 | Plus |
| CG15309-PD | 114 | CG15309-PD | 1..114 | 1..114 | 623 | 100 | Plus |
| CG15309-PC | 114 | CG15309-PC | 1..114 | 1..114 | 623 | 100 | Plus |
| CG15309-PB | 114 | CG15309-PB | 1..114 | 1..114 | 623 | 100 | Plus |
| CG15309-PA | 114 | CG15309-PA | 1..114 | 1..114 | 623 | 100 | Plus |
