Clone Sequence Records
BO07955.3prime Sequence
924 bp (809 high quality bases) assembled on 2006-01-06
> BO07955.3prime
ATGGTCTAGAAAGCTTGCTTTTTTACAGTTCTTATTAAGATAAAAAACAA
AGCGTGAAAAATTAGTCTTCACTGTTTGCACTGTGGCTCGTCGCTCCTTT
AGCTCCCGTCGCTGCTGCCGCAGTTTAGACTTGAACAACTCCTCTAGTGC
CTGGACACGATCGCACATCTCCAACTCCGCGATGATCTGCGGCCAGTCGT
CCACTGCGAAAATGTCCATTAGTGCATCTAGTCCTTCAGACAGGGCCCAC
AGGTCATCTTCCTGGGCACAGTAAGTCAATAGGAAGAGCACTATTGCCTT
AACCAGGGGCTCTGAGAGCAGAGAACCCAGCGTACCCAGCATGCGGTTCC
AGTTAACGCGAATATTTATATCTGTGCACTTGCTAGCGCCCTCGATAATC
ATGTTGAGATCATTCTCGGTCATCTGGCCGAAAAGATCCTTGCGAGACTT
GAGCAAACTCAGCGAGGAGCGCATTAGTGACGTAATGGCCTCCATAACGG
ATACATCTTCACTTCCCCTAAATGCTTGTTGACCCAAGATCATCCACATG
TTATAGAGGTTGCTGCAGCCCCCCAAATCTTCAGGGGGCAGCACATTGCA
TAGGTTCTGGAGGCAAATCAAGTATGATACTCTTAATTTTTCCACTTTCT
CCTTGATATTCTCTTGCTGGGACACAAGATTTTCCACAGCAGGTTGCAGT
GGTTGAGCCTTTTGCCATAGTTTCTCGATCACTTTGTTTTGTTTGATAGT
CTCCAAGAAGTTGGCGGGCAGTCCCCCCGATCCACTGTCAGCTGTCTCGT
CCTCCATGTCGTAATCGGCCACGCTCTCAGACTCTGAATGCTCGCTATCT
GTATCCCAGTTGCTCTGTTCATCGCTGGAGCCCAAGTTGGTTATAATCTC
CGCTACCAAGCGCTGGGCATCTAG
BO07955.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:14:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10286-PA | 1878 | CG10286-RA | 970..1875 | 924..19 | 4480 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:04:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10286-RA | 2151 | CG10286-RA | 1022..1927 | 924..19 | 4500 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:04:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6369986..6370891 | 924..19 | 4500 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-11 22:04:33 has no hits.
BO07955.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:33:41 Download gff for
BO07955.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-PA | 970..1878 | 15..924 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:22:15 Download gff for
BO07955.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-PA | 970..1878 | 15..924 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:46:59 Download gff for
BO07955.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 1022..1933 | 11..924 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:58:34 Download gff for
BO07955.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 1022..1933 | 11..924 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:58:34 Download gff for
BO07955.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6369986..6370897 | 11..924 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:46:59 Download gff for
BO07955.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2195708..2196619 | 11..924 | 99 | | Minus |
BO07955.5prime Sequence
857 bp (856 high quality bases) assembled on 2006-01-06
> BO07955.5prime
GAAGTTATCAGTCGACATGGGAAAAGTTCGAAAAGTAAAAACACGGACGC
CATCCGGCGTGGACACCTCGGCGGAAATCGATGTGGAATCAGCGGGCGAA
GCGGAGGGCTGCGGACCCATCGAGGCGATTTGCGTTCACCTGCAGCAGGC
GAACGTGGAGGAGAAGCTGAACGGACTGCACTCATTCGCCGTGCTGGCGC
TGCGAAAGGAGAAGGTTCCCGAAATACGCGACAGCGAGTTGGTCCGGATT
GCGGCCCCCCTGCTGTGCGATAAGGAGAGCGCCATCCGGAATGCGGCGGC
CGGTGCCTTTCGGAATTTGTCGGTGTTTGGCACGGAGGTGTGCGACTTCC
TCGTTGAGAACGACATACTGACCGCCCTGCTGACTCTGGTCCGTAGCTAT
GATCTGACAAAAGGTGGATTCGAAAACGAGCTGCATGCGGACACCTTCCA
GCAAGCAATCCATCTGCTCCGAAATCTGTGCGAGAGCTCGCCCACCGCCA
CAGAAGCACTAAATCAGGCCAACTTTCTTTCCAGCCTGCTGCTGGGCTTC
GACTACAGAAAGTTCGGACTCGAAGTTGCCATTTCAGTGGCCCAACTCGT
ATTGGTGGTGTCTGAGAACAACTCCAGCTCGTGGAACGTCCTGGCCAGCA
GTACAATACTACCTGAGCTTCTTGTGGCTCCCACAGAAAGTCACGCGCAG
CTTTACCTGAACGCCTTAGCTGCTGGTATCCTATGCAATGTACCCGCATG
CGCGGCCGCCCACACTCGGGAAATCCTGAACAGTCTGGACAAACTACTCT
CCATAGATCCACAGGCCCAGCTGCAAAGCTGCAAAAGCGAAATTCTAAAT
GCAAAGT
BO07955.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:14:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10286-PA | 1878 | CG10286-RA | 1..841 | 17..857 | 4205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-09 19:50:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10286-RA | 2151 | CG10286-RA | 53..893 | 17..857 | 4205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-09 19:50:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6369017..6369857 | 17..857 | 4205 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-09 19:50:09 has no hits.
BO07955.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:33:42 Download gff for
BO07955.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-PA | 1..841 | 17..857 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:22:16 Download gff for
BO07955.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-PA | 1..841 | 17..857 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 04:11:35 Download gff for
BO07955.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 53..893 | 17..857 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-09 21:22:08 Download gff for
BO07955.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 53..893 | 17..857 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-09 21:22:08 Download gff for
BO07955.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6369017..6369857 | 17..857 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 04:11:35 Download gff for
BO07955.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2194739..2195579 | 17..857 | 100 | | Plus |
BO07955.complete Sequence
1909 bp (1909 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ630996
> BO07955.complete
GAAGTTATCAGTCGACATGGGAAAAGTTCGAAAAGTAAAAACACGGACGC
CATCCGGCGTGGACACCTCGGCGGAAATCGATGTGGAATCAGCGGGCGAA
GCGGAGGGCTGCGGACCCATCGAGGCGATTTGCGTTCACCTGCAGCAGGC
GAACGTGGAGGAGAAGCTGAACGGACTGCACTCATTCGCCGTGCTGGCGC
TGCGAAAGGAGAAGGTTCCCGAAATACGCGACAGCGAGTTGGTCCGGATT
GCGGCCCCCCTGCTGTGCGATAAGGAGAGCGCCATCCGGAATGCGGCGGC
CGGTGCCTTTCGGAATTTGTCGGTGTTTGGCACGGAGGTGTGCGACTTCC
TCGTTGAGAACGACATACTGACCGCCCTGCTGACTCTGGTCCGTAGCTAT
GATCTGACAAAAGGTGGATTCGAAAACGAGCTGCATGCGGACACCTTCCA
GCAAGCAATCCATCTGCTCCGAAATCTGTGCGAGAGCTCGCCCACCGCCA
CAGAAGCACTAAATCAGGCCAACTTTCTTTCCAGCCTGCTGCTGGGCTTC
GACTACAGAAAGTTCGGACTCGAAGTTGCCATTTCAGTGGCCCAACTCGT
ATTGGTGGTGTCTGAGAACAACTCCAGCTCGTGGAACGTCCTGGCCAGCA
GTACAATACTACCTGAGCTTCTTGTGGCTCCCACAGAAAGTCACGCGCAG
CTTTACCTGAACGCCTTAGCTGCTGGTATCCTATGCAATGTACCCGCATG
CGCGGCCGCCCACACTCGGGAAATCCTGAACAGTCTGGACAAACTACTCT
CCATAGATCCACAGGCCCAGCTGCAAAGCTGCAAAAGCGAAATTCTAAAT
GCAAAGTCGAAGAACGAGGCCCCCGTGCTGGAAATCTCCATGGAGACAGA
GGATATGACGGAAACACAGAGTGCCAATCAGTCGAAACCTAACCAATGCG
ATGCCGAGGTAGCACTCAAGAACCTCGAGCACTTGCTAGATGCCCAGCGC
CTGGTAGCGGAGATTATAACCAACCTGGGCTCCAGCGATGAACAGAGCAA
CTGGGATACAGATAGCGAGCATTCAGAGTCTGAGAGCGTGGCCGATTACG
ACATGGAGGACGAGACAGCTGACAGTGGATCGGGGGGACTGCCCGCCAAC
TTCTTGGAGACTATCAAACAAAACAAAGTGATCGAGAAACTATGGCAAAA
GGCTCAACCACTGCAACCTGCTGTGGAAAATCTTGTGTCCCAGCAAGAGA
ATATCAAGGAGAAAGTGGAAAAATTAAGAGTATCATACTTGATTTGCCTC
CAGAACCTATGCAATGTGCTGCCCCCTGAAGATTTGGGGGGCTGCAGCAA
CCTCTATAACATGTGGATGATCTTGGGTCAACAAGCATTTAGGGGAAGTG
AAGATGTATCCGTTATGGAGGCCATTACGTCACTAATGCGCTCCTCGCTG
AGTTTGCTCAAGTCTCGCAAGGATCTTTTCGGCCAGATGACCGAGAATGA
TCTCAACATGATTATCGAGGGCGCTAGCAAGTGCACAGATATAAATATTC
GCGTTAACTGGAACCGCATGCTGGGTACGCTGGGTTCTCTGCTCTCAGAG
CCCCTGGTTAAGGCAATAGTGCTCTTCCTATTGACTTACTGTGCCCAGGA
AGATGACCTGTGGGCCCTGTCTGAAGGACTAGATGCACTAATGGACATTT
TCGCAGTGGACGACTGGCCGCAGATCATCGCGGAGTTGGAGATGTGCGAT
CGTGTCCAGGCACTAGAGGAGTTGTTCAAGTCTAAACTGCGGCAGCAGCG
ACGGGAGCTAAAGGAGCGACGAGCCACAGTGCAAACAGTGAAGACTAATT
TTTCACGCTTTGTTTTTTATCTTAATAAGAACTGTAAAAAAGCAAGCTTT
CTAGACCAT
BO07955.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:07:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10286-RA | 1878 | CG10286-PA | 1..1875 | 17..1891 | 9375 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:07:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10286-RA | 2151 | CG10286-RA | 53..1927 | 17..1891 | 9375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:07:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6369017..6370891 | 17..1891 | 9375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:07:25 has no hits.
BO07955.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:01:49 Download gff for
BO07955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 1..1878 | 17..1895 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:20:26 Download gff for
BO07955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 64..1944 | 17..1899 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:48:22 Download gff for
BO07955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 53..1921 | 17..1885 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:01:49 Download gff for
BO07955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 64..1944 | 17..1899 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:06:57 Download gff for
BO07955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 53..1921 | 17..1885 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:06:57 Download gff for
BO07955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6369017..6370885 | 17..1885 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:48:22 Download gff for
BO07955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2194739..2196607 | 17..1885 | 100 | | Plus |
BO07955.pep Sequence
Translation from 16 to 1909
> BO07955.pep
MGKVRKVKTRTPSGVDTSAEIDVESAGEAEGCGPIEAICVHLQQANVEEK
LNGLHSFAVLALRKEKVPEIRDSELVRIAAPLLCDKESAIRNAAAGAFRN
LSVFGTEVCDFLVENDILTALLTLVRSYDLTKGGFENELHADTFQQAIHL
LRNLCESSPTATEALNQANFLSSLLLGFDYRKFGLEVAISVAQLVLVVSE
NNSSSWNVLASSTILPELLVAPTESHAQLYLNALAAGILCNVPACAAAHT
REILNSLDKLLSIDPQAQLQSCKSEILNAKSKNEAPVLEISMETEDMTET
QSANQSKPNQCDAEVALKNLEHLLDAQRLVAEIITNLGSSDEQSNWDTDS
EHSESESVADYDMEDETADSGSGGLPANFLETIKQNKVIEKLWQKAQPLQ
PAVENLVSQQENIKEKVEKLRVSYLICLQNLCNVLPPEDLGGCSNLYNMW
MILGQQAFRGSEDVSVMEAITSLMRSSLSLLKSRKDLFGQMTENDLNMII
EGASKCTDINIRVNWNRMLGTLGSLLSEPLVKAIVLFLLTYCAQEDDLWA
LSEGLDALMDIFAVDDWPQIIAELEMCDRVQALEELFKSKLRQQRRELKE
RRATVQTVKTNFSRFVFYLNKNCKKASFLDH
BO07955.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:37:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10286-PA | 625 | CG10286-PA | 1..625 | 1..625 | 3156 | 100 | Plus |
