Clone Sequence Records
BO07969.3prime Sequence
941 bp (851 high quality bases) assembled on 2006-01-06
> BO07969.3prime
ATGGTCTAGAAAGCTTGCTTCGTTCGCCAGCTCATCAATGCGACACCGCA
CAGCGTGCTCCAGAACCTCCAGACTGGCGTAGTCTAACTCCTTCACCAAA
CACAGCGCGGCGGAGAGAATATTTGAATTCCTATTTATGGGCCTGCGATG
GTAGCCCGAGTAGTGATTCATCACAGAGGCCGACAATGACGAGGTCCCAT
CACTATATCTTCCCTCGGGTCGCCTCGCCCTCGACCTGTCCTCCGGATCC
CATTCGCCGCCGTTCTCCCGGGCACTGCCGTTACGATAGGGCGTCATCTC
CGGACCTGCGCTGCGTCGCTGCGGCTGGTGCAACTGCTTCTGGCTGCCAT
AGGGATTGTGGTGCACCTGGGGCACCTGCTGGTGCTCCTCCCACTCGGTT
AGGTCCGTCTGGCTGTGGCGGTAGTGCGCCGGGTAGGCGGGTCTGTCCGA
CTGGTAGTATTCCTCTTTCGTGGGAGTGGTGCAGCCGCGCTGCTGCTGCT
GCTGCTGCTGTTGCTGCTGCTGATATTGCTGCTGCGGCGGCGGCGAGTGT
TGCGGGTAGCTGTGTTGCTGCTGCTGCAGTATCTGCTGCGGCGATGATCG
CCTCGACTGCTGCTGTTGCTGGTATGCATCCTCGTAGACCTCGTCCTCGG
GTGCGGCGACTCCGCCTCCACGCAGCGCATCCTCCACCTCCTGCTGTGTG
ACCTCAACATTGTCGAGTTTCTTGAGGTTCGGCAGGGCGCGTAATACGAT
CGAACGATAGTTGGGACCCGCTCGTTCGCAGCAGGGATTTTCCTCCAGCC
AGAGATTCCTGAGACTCGGAAGATTTTGTAGGTAGGCGATCTCGTTGATG
TCAGAGATGCTGTTCTTGCGCAATATAGCTCCTGCAGTTTGGTGCAATCC
TCGGAAGTCGACAGCGTGCTGATCTTGTTGAACTAAAAGCC
BO07969.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:14:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-PB | 1170 | CG14995-RB | 313..1167 | 873..19 | 4275 | 100 | Minus |
| CG14995-PD | 1065 | CG14995-RD | 208..1062 | 873..19 | 4275 | 100 | Minus |
| CG14995-PC | 1236 | CG14995-RC | 788..1233 | 464..19 | 2230 | 100 | Minus |
| CG14995-PA | 1365 | CG14995-RA | 917..1362 | 464..19 | 2230 | 100 | Minus |
| CG14995-PC | 1236 | CG14995-RC | 208..621 | 873..460 | 2070 | 100 | Minus |
| CG14995-PA | 1365 | CG14995-RA | 208..618 | 873..463 | 2055 | 100 | Minus |
| CG14995-PC | 1236 | CG14995-RC | 149..208 | 931..872 | 250 | 96.6 | Minus |
| CG14995-PA | 1365 | CG14995-RA | 149..208 | 931..872 | 250 | 96.6 | Minus |
| CG14995-PB | 1170 | CG14995-RB | 254..313 | 931..872 | 250 | 96.6 | Minus |
| CG14995-PD | 1065 | CG14995-RD | 149..208 | 931..872 | 250 | 96.6 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:35:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-RH | 1870 | CG14995-RH | 277..1201 | 941..19 | 4530 | 99.5 | Minus |
| CG14995-RD | 2559 | CG14995-RD | 966..1890 | 941..19 | 4530 | 99.5 | Minus |
| CG14995-RG | 3229 | CG14995-RG | 1773..2721 | 941..19 | 4280 | 96.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:35:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4097506..4097804 | 462..760 | 1495 | 100 | Plus |
| 3L | 28110227 | 3L | 4095635..4095876 | 223..464 | 1210 | 100 | Plus |
| 3L | 28110227 | 3L | 4098026..4098197 | 761..931 | 780 | 98.3 | Plus |
| 3L | 28110227 | 3L | 4095012..4095123 | 19..130 | 560 | 100 | Plus |
| 3L | 28110227 | 3L | 4095200..4095295 | 130..225 | 480 | 100 | Plus |
Blast to na_te.dros performed 2015-02-13 15:35:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6717..6865 | 638..490 | 303 | 70.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6801..6977 | 623..451 | 281 | 63.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2338..2469 | 623..489 | 272 | 69.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6765..6954 | 623..436 | 243 | 63.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2442 | 623..489 | 242 | 66.2 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2374..2514 | 623..489 | 230 | 67.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2815..3024 | 623..426 | 219 | 61.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2359..2530 | 623..468 | 211 | 63.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2763..2889 | 624..492 | 199 | 66.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6837..7088 | 623..369 | 142 | 57.4 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1074..1149 | 623..548 | 136 | 67.5 | Minus |
BO07969.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:34:07 Download gff for
BO07969.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-PB | 243..1170 | 16..941 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:22:50 Download gff for
BO07969.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-PD | 138..1065 | 16..941 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 15:59:23 Download gff for
BO07969.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RD | 966..1890 | 19..941 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:07:09 Download gff for
BO07969.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RD | 966..1890 | 19..941 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:07:09 Download gff for
BO07969.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4098026..4098206 | 761..941 | 95 | | Plus |
| 3L | 4095012..4095122 | 19..129 | 100 | <- | Plus |
| 3L | 4095200..4095293 | 130..223 | 100 | <- | Plus |
| 3L | 4095636..4095874 | 224..462 | 100 | <- | Plus |
| 3L | 4097507..4097804 | 463..760 | 100 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 15:59:23 Download gff for
BO07969.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4095012..4095122 | 19..129 | 100 | <- | Plus |
| arm_3L | 4095200..4095293 | 130..223 | 100 | <- | Plus |
| arm_3L | 4095636..4095874 | 224..462 | 100 | <- | Plus |
| arm_3L | 4097507..4097804 | 463..760 | 100 | <- | Plus |
| arm_3L | 4098026..4098206 | 761..941 | 95 | | Plus |
BO07969.5prime Sequence
828 bp (807 high quality bases) assembled on 2006-01-06
> BO07969.5prime
GAAGTTATCAGTCGACATGGGTCTGCGATCTGGTGTCTGGGGTTTGGGGG
ATCTGCCCACTTTGCTGCTCACTTCGGTCGCTCCGGCTGCTTTCACTCGA
CCCAATTCCAGGGGCAATCTTCTAACCAGTTTAGAAGTGTCCACTTTGGA
GCGAGTCACGATTTCCTGGACTGGAAAAACACGCGCCCCTCGAGAAAAAC
GGGGCAGTGATCTCAGCGATGTGTCCATCATCAAGCGAATGCGTGGAGTG
GAAGTTCTGGCTCTTAGTGTCAACAAGATCAGCACGCTGTCGACCTTCGA
GGATTGCACCAAACTGCAGGAGCTATATTTGCGCAAGAACAGCATCTCTG
ACATCAACGAGATCGCCTACCTACAAAATCTTCCGAGTCTCAGGAATCTC
TGGCTGGAGGAAAATCCCTGCTGCGAACGAGCGGGTCCCAACTATCGTTC
GATCGTATTACGCGCCCTGCCGAACCTCAAGAAACTCGACAATGTTGAGG
TCACACAGCAGGAGGTGGAGGATGCGCTGCGTGGAGGCGGAGTCGCCGCA
CCCGAGGACGAGGTCTACGAGGATGCATACCAGCAACAGCAGCAGTCGAG
GCGATCATCGCCGCAGCAGATACTGCAGCAGCAGCAACACAGCTACCCGC
AACACTCGCCGCCGCCGCAGCAGCAATATCAGCAGCAGCAACAGCAGCAG
CAGCAGCAGCAGCGCGGCTGCACCACTCCCACGAAAGAGGAATACTACCA
GTCGGACAGACCCGCCTACCCGGCGCACTACCGCCACAGCCAGACGGACC
TAACCGAGTGGGAGGAGCACCAGCAGGT
BO07969.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:14:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-PB | 1170 | CG14995-RB | 1..812 | 17..828 | 4060 | 100 | Plus |
| CG14995-PD | 1065 | CG14995-RD | 80..707 | 201..828 | 3140 | 100 | Plus |
| CG14995-PC | 1236 | CG14995-RC | 80..621 | 201..742 | 2710 | 100 | Plus |
| CG14995-PA | 1365 | CG14995-RA | 80..618 | 201..739 | 2695 | 100 | Plus |
| CG14995-PC | 1236 | CG14995-RC | 788..878 | 738..828 | 455 | 100 | Plus |
| CG14995-PA | 1365 | CG14995-RA | 917..1007 | 738..828 | 455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:04:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-RH | 1870 | CG14995-RH | 35..846 | 17..828 | 4060 | 100 | Plus |
| CG14995-RG | 3229 | CG14995-RG | 1715..2342 | 201..828 | 3140 | 100 | Plus |
| CG14995-RD | 2559 | CG14995-RD | 908..1535 | 201..828 | 3140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:04:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4097506..4097804 | 740..442 | 1495 | 100 | Minus |
| 3L | 28110227 | 3L | 4100995..4101180 | 202..17 | 930 | 100 | Minus |
| 3L | 28110227 | 3L | 4098026..4098201 | 441..266 | 880 | 100 | Minus |
| 3L | 28110227 | 3L | 4095786..4095876 | 828..738 | 455 | 100 | Minus |
| 3L | 28110227 | 3L | 4100780..4100846 | 267..201 | 335 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 22:04:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6717..6865 | 564..712 | 303 | 70.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6801..6977 | 579..751 | 281 | 63.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2338..2469 | 579..713 | 272 | 69.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6765..6954 | 579..766 | 243 | 63.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2442 | 579..713 | 242 | 66.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2374..2514 | 579..713 | 230 | 67.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2815..3024 | 579..776 | 219 | 61.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2359..2530 | 579..734 | 211 | 63.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2763..2889 | 578..710 | 199 | 66.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1074..1149 | 579..654 | 136 | 67.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6837..7079 | 579..821 | 134 | 56.9 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1089..1157 | 579..646 | 108 | 63.8 | Plus |
BO07969.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:34:08 Download gff for
BO07969.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-PB | 1..812 | 17..828 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:22:52 Download gff for
BO07969.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-PB | 1..812 | 17..828 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:47:03 Download gff for
BO07969.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RH | 30..846 | 11..828 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:59:30 Download gff for
BO07969.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RH | 30..846 | 11..828 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:59:30 Download gff for
BO07969.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4095786..4095874 | 740..828 | 100 | <- | Minus |
| 3L | 4097507..4097804 | 442..739 | 100 | <- | Minus |
| 3L | 4098026..4098199 | 268..441 | 100 | <- | Minus |
| 3L | 4100780..4100845 | 202..267 | 100 | <- | Minus |
| 3L | 4100996..4101185 | 11..201 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:47:03 Download gff for
BO07969.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4095786..4095874 | 740..828 | 100 | <- | Minus |
| arm_3L | 4097507..4097804 | 442..739 | 100 | <- | Minus |
| arm_3L | 4098026..4098199 | 268..441 | 100 | <- | Minus |
| arm_3L | 4100780..4100845 | 202..267 | 100 | <- | Minus |
| arm_3L | 4100996..4101185 | 11..201 | 98 | | Minus |
BO07969.complete Sequence
1201 bp (1201 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ631001
> BO07969.complete
GAAGTTATCAGTCGACATGGGTCTGCGATCTGGTGTCTGGGGTTTGGGGG
ATCTGCCCACTTTGCTGCTCACTTCGGTCGCTCCGGCTGCTTTCACTCGA
CCCAATTCCAGGGGCAATCTTCTAACCAGTTTAGAAGTGTCCACTTTGGA
GCGAGTCACGATTTCCTGGACTGGAAAAACACGCGCCCCTCGAGAAAAAC
GGGGCAGTGATCTCAGCGATGTGTCCATCATCAAGCGAATGCGTGGAGTG
GAAGTTCTGGCTCTTAGTGTCAACAAGATCAGCACGCTGTCGACCTTCGA
GGATTGCACCAAACTGCAGGAGCTATATTTGCGCAAGAACAGCATCTCTG
ACATCAACGAGATCGCCTACCTACAAAATCTTCCGAGTCTCAGGAATCTC
TGGCTGGAGGAAAATCCCTGCTGCGAACGAGCGGGTCCCAACTATCGTTC
GATCGTATTACGCGCCCTGCCGAACCTCAAGAAACTCGACAATGTTGAGG
TCACACAGCAGGAGGTGGAGGATGCGCTGCGTGGAGGCGGAGTCGCCGCA
CCCGAGGACGAGGTCTACGAGGATGCATACCAGCAACAGCAGCAGTCGAG
GCGATCATCGCCGCAGCAGATACTGCAGCAGCAGCAACACAGCTACCCGC
AACACTCGCCGCCGCCGCAGCAGCAATATCAGCAGCAGCAACAGCAGCAG
CAGCAGCAGCAGCGCGGCTGCACCACTCCCACGAAAGAGGAATACTACCA
GTCGGACAGACCCGCCTACCCGGCGCACTACCGCCACAGCCAGACGGACC
TAACCGAGTGGGAGGAGCACCAGCAGGTGCCCCAGGTGCACCACAATCCC
TATGGCAGCCAGAAGCAGTTGCACCAGCCGCAGCGACGCAGCGCAGGTCC
GGAGATGACGCCCTATCGTAACGGCAGTGCCCGGGAGAACGGCGGCGAAT
GGGATCCGGAGGACAGGTCGAGGGCGAGGCGACCCGAGGGAAGATATAGT
GATGGGACCTCGTCATTGTCGGCCTCTGTGATGAATCACTACTCGGGCTA
CCATCGCAGGCCCATAAATAGGAATTCAAATATTCTCTCCGCCGCGCTGT
GTTTGGTGAAGGAGTTAGACTACGCCAGTCTGGAGGTTCTGGAGCACGCT
GTGCGGTGTCGCATTGATGAGCTGGCGAACGAAGCAAGCTTTCTAGACCA
T
BO07969.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:48:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-RH | 1170 | CG14995-PH | 1..1167 | 17..1183 | 5835 | 100 | Plus |
| CG14995-RD | 1065 | CG14995-PD | 80..1062 | 201..1183 | 4915 | 100 | Plus |
| CG14995-RG | 1089 | CG14995-PG | 80..951 | 201..1072 | 4360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:48:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-RH | 1870 | CG14995-RH | 35..1201 | 17..1183 | 5835 | 100 | Plus |
| CG14995-RD | 2559 | CG14995-RD | 908..1890 | 201..1183 | 4915 | 100 | Plus |
| CG14995-RG | 3229 | CG14995-RG | 1715..2586 | 201..1072 | 4360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:48:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4097506..4097804 | 740..442 | 1495 | 100 | Minus |
| 3L | 28110227 | 3L | 4095635..4095876 | 979..738 | 1210 | 100 | Minus |
| 3L | 28110227 | 3L | 4100995..4101180 | 202..17 | 930 | 100 | Minus |
| 3L | 28110227 | 3L | 4098026..4098201 | 441..266 | 880 | 100 | Minus |
| 3L | 28110227 | 3L | 4095012..4095123 | 1183..1072 | 560 | 100 | Minus |
| 3L | 28110227 | 3L | 4095200..4095295 | 1072..977 | 480 | 100 | Minus |
| 3L | 28110227 | 3L | 4100780..4100846 | 267..201 | 335 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 16:48:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6717..6865 | 564..712 | 303 | 70.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6801..6977 | 579..751 | 281 | 63.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2338..2469 | 579..713 | 272 | 69.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6765..6954 | 579..766 | 243 | 63.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2442 | 579..713 | 242 | 66.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2374..2514 | 579..713 | 230 | 67.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2815..3024 | 579..776 | 219 | 61.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2359..2530 | 579..734 | 211 | 63.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2763..2889 | 578..710 | 199 | 66.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6837..7088 | 579..833 | 142 | 57.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1074..1149 | 579..654 | 136 | 67.5 | Plus |
BO07969.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:14:01 Download gff for
BO07969.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RD | 72..1065 | 195..1186 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:35:22 Download gff for
BO07969.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RE | 30..1201 | 11..1183 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:59:23 Download gff for
BO07969.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RH | 35..1201 | 17..1185 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:14:01 Download gff for
BO07969.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RE | 30..1201 | 11..1183 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:27:22 Download gff for
BO07969.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14995-RH | 35..1201 | 17..1185 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:27:22 Download gff for
BO07969.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4095200..4095293 | 979..1072 | 100 | <- | Minus |
| 3L | 4098026..4098199 | 268..441 | 100 | <- | Minus |
| 3L | 4100780..4100845 | 202..267 | 100 | <- | Minus |
| 3L | 4100996..4101180 | 17..201 | 100 | | Minus |
| 3L | 4095636..4095874 | 740..978 | 100 | <- | Minus |
| 3L | 4097507..4097804 | 442..739 | 100 | <- | Minus |
| 3L | 4095009..4095122 | 1073..1185 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:59:23 Download gff for
BO07969.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4095009..4095122 | 1073..1185 | 98 | <- | Minus |
| arm_3L | 4095200..4095293 | 979..1072 | 100 | <- | Minus |
| arm_3L | 4095636..4095874 | 740..978 | 100 | <- | Minus |
| arm_3L | 4097507..4097804 | 442..739 | 100 | <- | Minus |
| arm_3L | 4098026..4098199 | 268..441 | 100 | <- | Minus |
| arm_3L | 4100780..4100845 | 202..267 | 100 | <- | Minus |
| arm_3L | 4100996..4101180 | 17..201 | 100 | | Minus |
BO07969.pep Sequence
Translation from 16 to 1201
> BO07969.pep
MGLRSGVWGLGDLPTLLLTSVAPAAFTRPNSRGNLLTSLEVSTLERVTIS
WTGKTRAPREKRGSDLSDVSIIKRMRGVEVLALSVNKISTLSTFEDCTKL
QELYLRKNSISDINEIAYLQNLPSLRNLWLEENPCCERAGPNYRSIVLRA
LPNLKKLDNVEVTQQEVEDALRGGGVAAPEDEVYEDAYQQQQQSRRSSPQ
QILQQQQHSYPQHSPPPQQQYQQQQQQQQQQQRGCTTPTKEEYYQSDRPA
YPAHYRHSQTDLTEWEEHQQVPQVHHNPYGSQKQLHQPQRRSAGPEMTPY
RNGSARENGGEWDPEDRSRARRPEGRYSDGTSSLSASVMNHYSGYHRRPI
NRNSNILSAALCLVKELDYASLEVLEHAVRCRIDELANEASFLDH
BO07969.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:26:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14995-PH | 389 | CG14995-PH | 1..389 | 1..389 | 2045 | 100 | Plus |
| CG14995-PD | 354 | CG14995-PD | 28..354 | 63..389 | 1730 | 100 | Plus |
| CG14995-PG | 362 | CG14995-PG | 28..362 | 63..389 | 1711 | 97.6 | Plus |
| CG14995-PC | 411 | CG14995-PC | 28..411 | 63..389 | 1641 | 84.9 | Plus |
| CG14995-PI | 419 | CG14995-PI | 28..419 | 63..389 | 1622 | 83.2 | Plus |
