Clone Sequence Records
BO07991.3prime Sequence
868 bp (797 high quality bases) assembled on 2006-01-06
> BO07991.3prime
ATGGTCTAGAAAGCTTGCAAAGTCTACTTGAAGCTTAGGATTCCCTTCTA
GGATCTTGGTTAATTGTCGTGTGATAAGAGGACAGAAATCAACCTTCAAC
CGGCGCAGTCCGCTAAGCGATTTGGTCAACTTCGCAACGACCTCATTGGA
CAGATTGGGCGAGCCACTCAGGTCCAGAAACTCCAAGGTAGACAGTTTTT
GCAATCCCATTAGGTGTAGCGTTGTAAAGTTCTGATTATGTAATATCAGG
GTCCGCAGTTCTTTAAGCTGGGAGAAAATACTCAGATCGAAGGAAGTATC
CGACATAGGTCCAAAAGAATCCAGAATCTCTAGATGGCGCAGCGAATACG
ATTCCGCGATCGACGTAAGCAGCACGTTATTCACATGGTAGTCAAGCTGG
GCGGAAGAGTGAATAACCAAGGTGTGGAGACGAGACAGACCGCCCAGCTG
TATCACATTCATGAAGTCGGTAAGCTCGAGAACCTCGAGCATGGGGCAGT
AATGTGCGAGCCGTCCGTACAGCTCATTATCTTTCGCAAACTTGACAATG
CCAGGGCAGCGCAGTTCGCGGAGATGCGACAGGGCCGCAAGTTGGATTAG
ACACTTGGGCGACAGATCTACGCATCCTGAAACATTTAAAATCTCCAAGG
AAATTGGCAGAGATTTTAAACTGTCGCCTTTAATACTAAAGTTTTCTCTG
ATGTCCAGACTCTTTAGTTTCGATAGCATCTGCAAGCAGTAAATGTGAGC
ATCTTTCAGGTTACAACGCCTCAAGGATATGTTGGTAATATTTATCAACC
CATTGGCACCATCGAACAGGTGAGTCATGTGGGCTAGGCTGACAGAAATT
TTGAAGAAGCTTAGCTCT
BO07991.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:14:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14891-PA | 1488 | CG14891-RA | 636..1485 | 868..19 | 4225 | 99.8 | Minus |
| CG14891-PB | 1011 | CG14891-RB | 159..1008 | 868..19 | 4225 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:07:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14891-RA | 1644 | CG14891-RA | 652..1501 | 868..19 | 4235 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:07:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16572166..16573015 | 868..19 | 4235 | 99.9 | Minus |
Blast to na_te.dros performed on 2015-02-11 04:07:51 has no hits.
BO07991.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:34:39 Download gff for
BO07991.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-PB | 159..1011 | 18..868 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:23:34 Download gff for
BO07991.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-PB | 159..1011 | 18..868 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:57:44 Download gff for
BO07991.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 652..1507 | 11..868 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 06:11:12 Download gff for
BO07991.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 652..1507 | 11..868 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 06:11:12 Download gff for
BO07991.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16572166..16573021 | 11..868 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:57:44 Download gff for
BO07991.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12397888..12398743 | 11..868 | 99 | | Minus |
BO07991.5prime Sequence
948 bp (755 high quality bases) assembled on 2006-01-06
> BO07991.5prime
GAAGTTATCAGTCGACATGTTCCGCATGAGGCCAGATATTAAAAATTTTT
ACATTGAGCGTGGTGTGGCGTACACCGAAGATCGCGAGGTTGTGCGACAG
CTGACGATCTCCGGGAGTAGGCGGTTTTTGAAGTACCAGCTCCTGAAGTA
CTTCTCGATTTTCGGAAAAGTAGAGAAACTCCATTGGAAAAAGAAAAAAA
GATCGGGATCGGTTCTTTTTTATGAGGCTACCCATGCGGCAAAGGCTTTG
TATTGTACTAAGCACACTATCGATGGACATGATCTTTATTTACAGGCCAG
CACCTCCTGGCACCCAACGCCGGTGGAGGAATCAGGAACTCTTTCTGCCT
ACGATCTACCCATTACCGATGACATTTGGTGGAAAGTGCTCGATTATCTA
TCACTAAATGAACGTCTCAACTTTGCCGCCAGTTGTGAAAGATTCCAGGC
GATCTACGAATTGGATTCGCATCGGATCAATCATGTTCTTAATATGAAGG
ACGTTTGCACACTGACCCACCGGGTCATTAAAAGATTGATGCTGCTATCA
GGAAAACACATTCATTGTGTAACAGGTGGCCCGCTTCATCCGAATTGGCC
GTATTTGACCGAGTTTGTGCAGCTGTTGGGTGTAAGCTGTCCCAATCTAA
CAGAGCTAAGCTTCTTCAAAATTTCTGTCAGCCTAGCCCACATGACTCAC
CTGTTCGATGGTGCCAATGGGTTGATTAATATTACCAACATATCCTTGAG
GCGTTGTAACCTGAAAGATGCTCACATTTACTGCTTGCAGATGCTATCGA
AACTAAAGAGTCTGGACATCAGAGAAAACTTTAGTATTAAAGGCGACAGT
TTAAAATCTCTGCCAATTTCCTTGGAGATTTTAAATGTTTCAGGATGCGT
AGATCTGTCGCCCAAGTGTCTATTCCAACTTGCGGCCCCTGTCGCATC
BO07991.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:14:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14891-PA | 1488 | CG14891-RA | 1..922 | 17..938 | 4585 | 99.8 | Plus |
| CG14891-PB | 1011 | CG14891-RB | 1..445 | 494..938 | 2200 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:17:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14891-RA | 1644 | CG14891-RA | 17..947 | 17..948 | 4620 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:17:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16571531..16572452 | 17..938 | 4595 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-02-13 00:17:21 has no hits.
BO07991.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:34:40 Download gff for
BO07991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-PA | 1..931 | 17..948 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:23:36 Download gff for
BO07991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-PA | 1..931 | 17..948 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:31:26 Download gff for
BO07991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 13..947 | 10..948 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:42:06 Download gff for
BO07991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 13..947 | 10..948 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:42:06 Download gff for
BO07991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16571527..16572461 | 10..948 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:31:26 Download gff for
BO07991.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12397249..12398183 | 10..948 | 99 | | Plus |
BO07991.complete Sequence
1519 bp (1519 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ631008
> BO07991.complete
GAAGTTATCAGTCGACATGTTCCGCATGAGGCCAGATATTAAAAATTTTT
ACATTGAGCGTGGTGTGGCGTACACCGAAGATCGCGAGGTTGTGCGACAG
CTGACGATCTCCGGGAGTAGGCGGTTTTTGAAGTACCAGCTCCTGAAGTA
CTTCTCGATTTTCGGAAAAGTAGAGAAACTCCATTGGAAAAAGAAAAAAA
GATCGGGATCGGTTCTTTTTTATGAGGCTACCCATGCGGCAAAGGCTTTG
TATTGTACTAAGCACACTATCGATGGACATGATCTTTATTTACAGGCCAG
CACCTCCTGGCACCCAACGCCGGTGGAGGAATCAGGAACTCTTTCTGCCT
ACGATCTACCCATTACCGATGACATTTGGTGGAAAGTGCTCGATTATCTA
TCACTAAATGAACGTCTCAACTTTGCCGCCAGTTGTGAAAGATTCCAGGC
GATCTACGAATTGGATTCGCATCGGATCAATCATGTTCTTAATATGAAGG
ACGTTTGCACACTGACCCACCGGGTCATTAAAAGATTGATGCTGCTATCA
GGAAAACACATTCATTGTGTAACAGGTGGCCCGCTTCATCCGAATTGGCC
GTATTTGACCGAGTTTGTGCAGCTGTTGGGTGTAAGCTGTCCCAATCTAA
CAGAGCTAAGCTTCTTCAAAATTTCTGTCAGCCTAGCCCACATGACTCAC
CTGTTCGATGGTGCCAATGGGTTGATTAATATTACCAACATATCCTTGAG
GCGTTGTAACCTGAAAGATGCTCACATTTACTGCTTGCAGATGCTATCGA
AACTAAAGAGTCTGGACATCAGAGAAAACTTTAGTATTAAAGGCGACAGT
TTAAAATCTCTGCCAATTTCCTTGGAGATTTTAAATGTTTCAGGATGCGT
AGATCTGTCGCCCAAGTGTCTAATCCAACTTGCGGCCCTGTCGCATCTCC
GCGAACTGCGCTGCCCTGGCATTGTCAAGTTTGCGAAAGATAATGAGCTG
TACGGACGGCTCGCACATTACTGCCCCATGCTCGAGGTTCTCGAGCTTAC
CGACTTCATGAATGTGATACAGCTGGGCGGTCTGTCTCGTCTCCACACCT
TGGTTATTCACTCTTCCGCCCAGCTTGACTACCATGTGAATAACGTGCTG
CTTACGTCGATCGCGGAATCGTATTCGCTGCGCCATCTAGAGATTCTGGA
TTCTTTTGGACCTATGTCGGATACTTCCTTCGATCTGAGTATTTTCTCCC
AGCTTAAAGAACTGCGGACCCTGATATTACATAATCAGAACTTTACAACG
CTACACCTAATGGGATTGCAAAAACTGTCTACCTTGGAGTTTCTGGACCT
GAGTGGCTCGCCCAATCTGTCCAATGAGGTCGTTGCGAAGTTGACCAAAT
CGCTTAGCGGACTGCGCCGGTTGAAGGTTGATTTCTGTCCTCTTATCACA
CGACAATTAACCAAGATCCTAGAAGGGAATCCTAAGCTTCAAGTAGACTT
TGCAAGCTTTCTAGACCAT
BO07991.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:04:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14891-RA | 1488 | CG14891-PA | 1..1485 | 17..1501 | 7425 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:04:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14891-RA | 1644 | CG14891-RA | 17..1501 | 17..1501 | 7425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:04:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16571531..16573015 | 17..1501 | 7425 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 20:04:50 has no hits.
BO07991.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:13:51 Download gff for
BO07991.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 1..1488 | 17..1502 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:35:11 Download gff for
BO07991.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 12..1506 | 10..1509 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:52 Download gff for
BO07991.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 22..1501 | 22..1503 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:13:52 Download gff for
BO07991.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 12..1506 | 10..1509 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:14:20 Download gff for
BO07991.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 22..1501 | 22..1503 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:14:20 Download gff for
BO07991.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16571536..16573015 | 22..1503 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:52 Download gff for
BO07991.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12397258..12398737 | 22..1503 | 99 | | Plus |
BO07991.pep Sequence
Translation from 16 to 1519
> BO07991.pep
MFRMRPDIKNFYIERGVAYTEDREVVRQLTISGSRRFLKYQLLKYFSIFG
KVEKLHWKKKKRSGSVLFYEATHAAKALYCTKHTIDGHDLYLQASTSWHP
TPVEESGTLSAYDLPITDDIWWKVLDYLSLNERLNFAASCERFQAIYELD
SHRINHVLNMKDVCTLTHRVIKRLMLLSGKHIHCVTGGPLHPNWPYLTEF
VQLLGVSCPNLTELSFFKISVSLAHMTHLFDGANGLINITNISLRRCNLK
DAHIYCLQMLSKLKSLDIRENFSIKGDSLKSLPISLEILNVSGCVDLSPK
CLIQLAALSHLRELRCPGIVKFAKDNELYGRLAHYCPMLEVLELTDFMNV
IQLGGLSRLHTLVIHSSAQLDYHVNNVLLTSIAESYSLRHLEILDSFGPM
SDTSFDLSIFSQLKELRTLILHNQNFTTLHLMGLQKLSTLEFLDLSGSPN
LSNEVVAKLTKSLSGLRRLKVDFCPLITRQLTKILEGNPKLQVDFASFLD
H
BO07991.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:26:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14891-PA | 495 | CG14891-PA | 1..495 | 1..495 | 2572 | 100 | Plus |
| CG15056-PA | 399 | CG15056-PA | 13..378 | 118..481 | 435 | 33.2 | Plus |
