Clone BO08045 Report

Search the DGRC for BO08045

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:80
Well:45
Vector:pDNR-Dual
Associated Gene/Transcriptdpr14-RA
Protein status:BO08045.pep: validated full length
Sequenced Size:1054

Clone Sequence Records

BO08045.3prime Sequence

831 bp (814 high quality bases) assembled on 2006-01-06

> BO08045.3prime
ATGGTCTAGAAAGCTTGCTCGTCTTAATTCCCATCCCCATCCCCACACTT
GTCCCAAGCCCAATCCCCGATTCATTCCGGCTACGGAAATCGAACCGGAG
ATGCAAACGTACACTAGAAATAACACAACCATTGTGGAGGCGTTGGCCTT
TTGGCGGCTTCCGTTCGCATGCTGCATGGCGGCTGGCTCCTCACCGTTCA
GCACATGCACCACCACCGTCTCCGTAATCTCATTGCCCAGCATGCAGGTG
TAGTTGCCCGTGTCCTGGCGATTGGCATTGGCGATATACAGGCGACTCAG
AGCTCGTCCTGGCAGCATGTCCGTCTTGACACTGATTCCTCCGCGACTAG
TATCGTAGTTGAGCAGGCGCGGTCCGTGCCGCCAGGTGATATAGGAGGAG
GGATGCGGAATCTTCGAAATGACGCACTGCAGCTCGATGGTGCTGCCAGC
CTTGTAGTACTTCTCCGGCGTGGCCGAGCCCCGCTCGTCGAGTATCTCCA
CGTGAGGAACAATTATAGTAAGGTAAACGAGCAGGACGAGCGGCGGATGC
GAGGACACCTGGCACTCGTAGGGACCCTCGTCCCGCTCGTTGGCGAACTG
GATGAGCAGCTTCCAATCGTTGGGCTCCTCGAACTCCAGCGAATACCGCG
AGTCGCCGCTATATGTGTGCTGGCCAAAGGTTATCAGGGTGAGATCATCG
CCACGGCGACGCATCCAGGACACCGTCTTGCCCTGCAGATCGTTCACCCG
GCAGTGCAGATAAACGCTGGACGAGAGCTGGGTGCTGATGTTCAGCGTGG
TGTACGGATCGGCGAAGAACGGGAACGGCTC

BO08045.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:15:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG10946-PA 1023 dpr14-RA 208..1020 831..19 4065 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:04:24
Subject Length Description Subject Range Query Range Score Percent Strand
dpr14-RB 3794 CG10946-RB 867..1679 831..19 4065 100 Minus
dpr14-RA 1668 CG10946-RA 684..1496 831..19 4065 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:04:21
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7906500..7906821 510..831 1610 100 Plus
X 23542271 X 7906249..7906427 332..510 895 100 Plus
X 23542271 X 7905819..7905995 19..195 885 100 Plus
X 23542271 X 7906043..7906184 193..334 710 100 Plus
Blast to na_te.dros performed on 2015-02-13 07:04:22 has no hits.

BO08045.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:36:16 Download gff for BO08045.3prime
Subject Subject Range Query Range Percent Splice Strand
dpr14-PA 208..1023 16..831 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:25:49 Download gff for BO08045.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10946-PA 208..1023 16..831 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:10:02 Download gff for BO08045.3prime
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 684..1496 19..831 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:17:42 Download gff for BO08045.3prime
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 684..1496 19..831 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:17:42 Download gff for BO08045.3prime
Subject Subject Range Query Range Percent Splice Strand
X 7905819..7905994 19..194 100 <- Plus
X 7906045..7906181 195..331 100 <- Plus
X 7906249..7906426 332..509 100 <- Plus
X 7906500..7906821 510..831 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:10:02 Download gff for BO08045.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7799852..7800027 19..194 100 <- Plus
arm_X 7800078..7800214 195..331 100 <- Plus
arm_X 7800282..7800459 332..509 100 <- Plus
arm_X 7800533..7800854 510..831 100   Plus

BO08045.5prime Sequence

947 bp (903 high quality bases) assembled on 2006-01-06

> BO08045.5prime
GAAGTTATCAGTCGACATGAGATCGAGGCTGTTTTGGATACTGGCGATTA
TATACTCCTCACTCCATCACATCGGCTCGGGTTCCACGTCGACCACATTG
AAACGACCGCGAGCTGGCGATCCATTCGACACGTTTCCGAAGAACTTCTG
GCAGGAGTTCTCATCGCCGTTCACCGACACGCCCGAGGATGAGGAGCTGG
AGGTCACCGAGACGACCACCCACGAGCCGTTCCCGTTCTTCGCCGATCCG
TACACCACGCTGAACATCAGCACCCAGCTCTCGTCCAGCGTTTATCTGCA
CTGCCGGGTGAACGATCTGCAGGGCAAGACGGTGTCCTGGATGCGTCGCC
GTGGCGATGATCTCACCCTGATAACCTTTGGCCAGCACACATATAGCGGC
GACTCGCGGTATTCGCTGGAGTTCGAGGAGCCCAACGATTGGAAGCTGCT
CATCCAGTTCGCCAACGAGCGGGACGAGGGTCCCTACGAGTGCCAGGTGT
CCTCGCATCCGCCGCTCGTCCTGCTCGTTTACCTTACTATAATTGTTCCT
CACGTGGAGATACTCGACGAGCGGGGCTCGGCCACGCCGGAGAAGTACTA
CAAGGCTGGCAGCACCATCGAGCTGCAGTGCGTCATTTCGAAGATTCCGC
ATCCCTCCTCCTATATCACCTGGCGGCACGGACCGCGCCTGCTCAACTAC
GATACTAGTCGCGGAGGAATCAGTGTCAAGACGGACATGCTGCCAGGACG
AGCTCTGAGTCGCCTGTATATCGCCAATGCCAATCGCCAGGACACGGGCA
ACTACACCTGCATGCTGGGCAATGAGATTACGGAGACGGTGGTGGTGCAT
GTGCTGAACGGTGAGGAGCCAGCCGCCATGCAGCATGCGAACGGAAGCCG
CCAAAAGGGCCACGCCTCCACAATGGGTGTGTTATTTCTAGTGTACG

BO08045.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:16:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG10946-PA 1023 dpr14-RA 1..931 17..947 4580 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:06:00
Subject Length Description Subject Range Query Range Score Percent Strand
dpr14-RB 3794 CG10946-RB 660..1590 17..947 4610 99.7 Plus
dpr14-RA 1668 CG10946-RA 477..1407 17..947 4610 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:05:57
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7906500..7906946 545..99 2235 100 Minus
X 23542271 X 7906249..7906427 723..545 895 100 Minus
X 23542271 X 7906043..7906184 862..721 710 100 Minus
X 23542271 X 7907257..7907338 98..17 410 100 Minus
X 23542271 X 7905908..7905995 947..860 395 96.6 Minus
Blast to na_te.dros performed on 2015-02-11 22:05:58 has no hits.

BO08045.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:36:17 Download gff for BO08045.5prime
Subject Subject Range Query Range Percent Splice Strand
dpr14-PA 1..931 17..947 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:25:50 Download gff for BO08045.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10946-PA 1..931 17..947 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:47:17 Download gff for BO08045.5prime
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 472..1407 9..947 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 01:02:54 Download gff for BO08045.5prime
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 472..1407 9..947 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 01:02:54 Download gff for BO08045.5prime
Subject Subject Range Query Range Percent Splice Strand
X 7906249..7906426 546..723 100 <- Minus
X 7905908..7905994 861..947 96 <- Minus
X 7906045..7906181 724..860 100 <- Minus
X 7906500..7906946 99..545 100 <- Minus
X 7907257..7907343 9..98 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:47:17 Download gff for BO08045.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7799941..7800027 861..947 96 <- Minus
arm_X 7800078..7800214 724..860 100 <- Minus
arm_X 7800282..7800459 546..723 100 <- Minus
arm_X 7800533..7800979 99..545 100 <- Minus
arm_X 7801290..7801376 9..98 96   Minus

BO08045.complete Sequence

1054 bp (1054 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ631025

> BO08045.complete
GAAGTTATCAGTCGACATGAGATCGAGGCTGTTTTGGATACTGGCGATTA
TATACTCCTCACTCCATCACATCGGCTCGGGTTCCACGTCGACCACATTG
AAACGACCGCGAGCTGGCGATCCATTCGACACGTTTCCGAAGAACTTCTG
GCAGGAGTTCTCATCGCCGTTCACCGACACGCCCGAGGATGAGGAGCTGG
AGGTCACCGAGACGACCACCCACGAGCCGTTCCCGTTCTTCGCCGATCCG
TACACCACGCTGAACATCAGCACCCAGCTCTCGTCCAGCGTTTATCTGCA
CTGCCGGGTGAACGATCTGCAGGGCAAGACGGTGTCCTGGATGCGTCGCC
GTGGCGATGATCTCACCCTGATAACCTTTGGCCAGCACACATATAGCGGC
GACTCGCGGTATTCGCTGGAGTTCGAGGAGCCCAACGATTGGAAGCTGCT
CATCCAGTTCGCCAACGAGCGGGACGAGGGTCCCTACGAGTGCCAGGTGT
CCTCGCATCCGCCGCTCGTCCTGCTCGTTTACCTTACTATAATTGTTCCT
CACGTGGAGATACTCGACGAGCGGGGCTCGGCCACGCCGGAGAAGTACTA
CAAGGCTGGCAGCACCATCGAGCTGCAGTGCGTCATTTCGAAGATTCCGC
ATCCCTCCTCCTATATCACCTGGCGGCACGGACCGCGCCTGCTCAACTAC
GATACTAGTCGCGGAGGAATCAGTGTCAAGACGGACATGCTGCCAGGACG
AGCTCTGAGTCGCCTGTATATCGCCAATGCCAATCGCCAGGACACGGGCA
ACTACACCTGCATGCTGGGCAATGAGATTACGGAGACGGTGGTGGTGCAT
GTGCTGAACGGTGAGGAGCCAGCCGCCATGCAGCATGCGAACGGAAGCCG
CCAAAAGGCCAACGCCTCCACAATGGTTGTGTTATTTCTAGTGTACGTTT
GCATCTCCGGTTCGATTTCCGTAGCCGGAATGAATCGGGGATTGGGCTTG
GGACAAGTGTGGGGATGGGGATGGGAATTAAGACGAGCAAGCTTTCTAGA
CCAT

BO08045.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:12:32
Subject Length Description Subject Range Query Range Score Percent Strand
dpr14-RB 1023 CG10946-PB 1..1020 17..1036 5100 100 Plus
dpr14-RA 1023 CG10946-PA 1..1020 17..1036 5100 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:12:33
Subject Length Description Subject Range Query Range Score Percent Strand
dpr14-RB 3794 CG10946-RB 660..1679 17..1036 5100 100 Plus
dpr14-RA 1668 CG10946-RA 477..1496 17..1036 5100 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:12:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7906500..7906946 545..99 2235 100 Minus
X 23542271 X 7906249..7906427 723..545 895 100 Minus
X 23542271 X 7905819..7905995 1036..860 885 100 Minus
X 23542271 X 7906043..7906184 862..721 710 100 Minus
X 23542271 X 7907257..7907338 98..17 410 100 Minus
Blast to na_te.dros performed on 2014-11-28 00:12:30 has no hits.

BO08045.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:13:35 Download gff for BO08045.complete
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 1..1023 17..1039 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:34:49 Download gff for BO08045.complete
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 439..1463 9..1036 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:19:57 Download gff for BO08045.complete
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 477..1496 17..1038 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:13:35 Download gff for BO08045.complete
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 439..1463 9..1036 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:27:57 Download gff for BO08045.complete
Subject Subject Range Query Range Percent Splice Strand
dpr14-RA 477..1496 17..1038 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:27:57 Download gff for BO08045.complete
Subject Subject Range Query Range Percent Splice Strand
X 7906045..7906181 724..860 100 <- Minus
X 7906249..7906426 546..723 100 <- Minus
X 7905815..7905994 861..1038 98 <- Minus
X 7906500..7906946 99..545 100 <- Minus
X 7907257..7907338 17..98 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:19:57 Download gff for BO08045.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 7799848..7800027 861..1038 98 <- Minus
arm_X 7800078..7800214 724..860 100 <- Minus
arm_X 7800282..7800459 546..723 100 <- Minus
arm_X 7800533..7800979 99..545 100 <- Minus
arm_X 7801290..7801371 17..98 100   Minus

BO08045.pep Sequence

Translation from 16 to 1054

> BO08045.pep
MRSRLFWILAIIYSSLHHIGSGSTSTTLKRPRAGDPFDTFPKNFWQEFSS
PFTDTPEDEELEVTETTTHEPFPFFADPYTTLNISTQLSSSVYLHCRVND
LQGKTVSWMRRRGDDLTLITFGQHTYSGDSRYSLEFEEPNDWKLLIQFAN
ERDEGPYECQVSSHPPLVLLVYLTIIVPHVEILDERGSATPEKYYKAGST
IELQCVISKIPHPSSYITWRHGPRLLNYDTSRGGISVKTDMLPGRALSRL
YIANANRQDTGNYTCMLGNEITETVVVHVLNGEEPAAMQHANGSRQKANA
STMVVLFLVYVCISGSISVAGMNRGLGLGQVWGWGWELRRASFLDH

BO08045.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:26:47
Subject Length Description Subject Range Query Range Score Percent Strand
dpr14-PB 340 CG10946-PB 1..340 1..340 1816 100 Plus
dpr14-PA 340 CG10946-PA 1..340 1..340 1816 100 Plus
dpr20-PA 525 CG12191-PA 278..520 83..317 527 41.6 Plus
dpr6-PC 390 CG14162-PC 62..305 64..314 441 40.2 Plus
dpr6-PF 396 CG14162-PF 62..311 64..314 424 39.2 Plus