Clone BO08046 Report

Search the DGRC for BO08046

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:80
Well:46
Vector:pDNR-Dual
Associated Gene/TranscriptZasp66-RF
Protein status:BO08046.pep: validated full length
Sequenced Size:1240

Clone Sequence Records

BO08046.3prime Sequence

941 bp (805 high quality bases) assembled on 2006-01-06

> BO08046.3prime
ATGGTCTAGAAAGCTTGCGTACTCGGTGGCACCAATCACGCTGTACATGA
GACGATTGAAGGAGCCGCTCTGGCGTATGTTCTCATCGTGGGTGTTTACC
ACATTGTACGGCGGCCGGGATACTGGCGCTGATACTGGTTTCTTTCCTGG
AACCAATCTATTGGGCTGATAGACCTTAGTCTGCACAGGAATGGTCACTT
CCTGTGGCGAGGATTGGCCATAGTTGCTGTAGCCGCCCTCTTCTTGAATG
GCTCTGTAGGTTTCGCTGTTCCTGGGATCGTACTGGACAGTTTTCTTATA
GCCGTTAAGTTTTGTTGGCAAAGGACGATGCAAAGGACTGTCCTTCAAGC
GATTGCTTTCGCTTGTGGCGAAGGGAACTGTGGATCTGATGGTGTCCTCG
ATGTTGTTGTTGGAGTACAGGCCAATGGGCGAGTTGAATTGCTTGTGGAA
GACGCGGCCAGTGTCGGCTTCCGAACCGACCACCTTGTGCAGCATGGTGT
CGGCCACGCGCTGCTTCATGATACTGTCATGGTAGTCGTGTCCTGGGTGG
GCGCGCACAGCCGGGTTGGGGTAGTGCCTCAAGTAGGACTCTGTCGTGGG
CGCATCCTTCTTCACTTTGGCGCCGGGCAGGACCAGCGGAGTTGTACGGT
AGGGCTGATTCACAATGGCCGCCTGCTCCTCATCGACGTCTTGTTGATGG
TCCCTGGTTGGCTTGGGTGAGAACACAGTCGATGGCACCTCATAGCCACC
GGATGAGTTCAGCTGGGGAAACACGGTCTGCGGCAACGTGTCCACCGGCA
ACTGGAGGGCCCTCTCAAAGTGGCTGGGTCCGGGCAAAAAGGGCGACGGA
CCGCGGTGGGGCATCAGATCCGGAGTGACCGGCGGCAAAGTGGAGTTGCT
CCGAGATCCAGGACCTGCCTCCCTGAGTGCACCCTGCGTGT

BO08046.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:16:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG6416-PE 1293 CG6416-RE 387..1290 922..19 4520 100 Minus
CG6416-PF 1209 CG6416-RF 303..1206 922..19 4520 100 Minus
CG6416-PJ 720 CG6416-RJ 82..717 654..19 3180 100 Minus
CG6416-PA 720 CG6416-RA 82..717 654..19 3180 100 Minus
CG6416-PB 897 CG6416-RB 303..851 922..374 2745 100 Minus
CG6416-PI 648 CG6416-RI 82..364 654..372 1415 100 Minus
CG6416-PI 648 CG6416-RI 363..645 301..19 1415 100 Minus
CG6416-PH 408 CG6416-RH 82..362 654..374 1405 100 Minus
CG6416-PG 498 CG6416-RG 82..362 654..374 1405 100 Minus
CG6416-PB 897 CG6416-RB 852..897 141..96 230 100 Minus
CG6416-PH 408 CG6416-RH 363..408 141..96 230 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:06:50
Subject Length Description Subject Range Query Range Score Percent Strand
Zasp66-RF 1714 CG6416-RF 469..1391 941..19 4570 99.8 Minus
Zasp66-RE 1725 CG6416-RE 480..1402 941..19 4570 99.8 Minus
Zasp66-RA 1212 CG6416-RA 254..889 654..19 3180 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:06:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8627444..8627730 941..655 1360 98.3 Minus
3L 28110227 3L 8634580..8634785 657..452 1030 100 Minus
3L 28110227 3L 8637438..8637598 302..142 805 100 Minus
3L 28110227 3L 8638267..8638350 102..19 420 100 Minus
3L 28110227 3L 8635002..8635081 453..374 400 100 Minus
3L 28110227 3L 8635681..8635763 373..291 370 96.4 Minus
3L 28110227 3L 8638155..8638198 143..100 220 100 Minus
Blast to na_te.dros performed on 2015-02-10 16:06:46 has no hits.

BO08046.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:36:18 Download gff for BO08046.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6416-PE 368..1293 18..941 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:25:52 Download gff for BO08046.3prime
Subject Subject Range Query Range Percent Splice Strand
CG6416-PF 284..1209 18..941 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:10:23 Download gff for BO08046.3prime
Subject Subject Range Query Range Percent Splice Strand
Zasp66-RE 480..1402 19..941 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:15:37 Download gff for BO08046.3prime
Subject Subject Range Query Range Percent Splice Strand
Zasp66-RE 480..1402 19..941 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:15:37 Download gff for BO08046.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 8627444..8627730 655..941 99 -> Minus
3L 8634583..8634783 454..654 100 -> Minus
3L 8635002..8635081 374..453 100 -> Minus
3L 8635681..8635752 302..373 100 -> Minus
3L 8637439..8637598 142..301 100 -> Minus
3L 8638157..8638195 103..141 100 -> Minus
3L 8638267..8638350 19..102 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:10:23 Download gff for BO08046.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8630539..8630698 142..301 100 -> Minus
arm_3L 8620544..8620830 655..941 99 -> Minus
arm_3L 8627683..8627883 454..654 100 -> Minus
arm_3L 8628102..8628181 374..453 100 -> Minus
arm_3L 8628781..8628852 302..373 100 -> Minus
arm_3L 8631257..8631295 103..141 100 -> Minus
arm_3L 8631367..8631450 19..102 100   Minus

BO08046.5prime Sequence

827 bp (815 high quality bases) assembled on 2006-01-06

> BO08046.5prime
GAAGTTATCAGTCGACATGAGCCCCAAGCTGCATGAGTTTGCGGTGGTGC
TACTGCGCGATGGTCAGGCCACGCCCTGGGGCATTCGTTTGGTGGGCGGC
AACGATCTGGACACGCCGCTAATTATCACCAGGGTGCAAGTGGGCAGCCC
AGCGCATGGCGAACTTCTAAGAGGCGACATCATCTCGAAGATCGGCGAGT
ACGACGCACGCGACCTGAGTCATGCGGATGCACAGCAGCTGTTCCGCGGC
GCTGGCAACGAGATCCGCCTGGTGGTGCACAGGGACAACAAAATCGCCTA
CACGCAGGGTGCAACTCAGGAGGCAGGTCCTGGATCTCGGAGCAACTCCA
CTTTGCCGCCGGTCACTCCGGATCTGATGCCCCACCGCGGTCCGTCGCCC
TTTTTGCCCGGACCCAGCCACTTTGAGAGGGCCCTCCAGTTGCCGGTGGA
CACGTTGCCGCAGACCGTGTTTCCCCAGCTGAACTCATCCGGTGGCTATG
AGGTGCCATCGACTGTGTTCTCACCCAAGCCAACCAGGGACCATCAACAA
GACGTCGATGAGGAGCAGGCGGCCATTGTGAATCAGCCCTACCGTACAAC
TCCGCTGGTCCTGCCCGGCGCCAAAGTGAAGAAGGATGCGCCCACGACAG
AGTCCTACTTGAGGCACTACCCCAACCCGGCTGTGCGCGCCCACCCAGGA
CACGACTACCATGACAGTATCATGAAGCAGCGCGTGGCCGACACCATGCT
GCACAAGGTGGTCGGTTCGGAAGCCGACACTGGCCGCGTCTTCCACAAGC
AATTCAACTCGCCCATTGGCCTGTACT

BO08046.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:16:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG6416-PB 897 CG6416-RB 1..811 17..827 4055 100 Plus
CG6416-PF 1209 CG6416-RF 1..811 17..827 4055 100 Plus
CG6416-PE 1293 CG6416-RE 200..895 132..827 3480 100 Plus
CG6416-PJ 720 CG6416-RJ 82..322 587..827 1205 100 Plus
CG6416-PA 720 CG6416-RA 82..322 587..827 1205 100 Plus
CG6416-PG 498 CG6416-RG 82..322 587..827 1205 100 Plus
CG6416-PH 408 CG6416-RH 82..322 587..827 1205 100 Plus
CG6416-PI 648 CG6416-RI 82..322 587..827 1205 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:10:10
Subject Length Description Subject Range Query Range Score Percent Strand
Zasp66-RM 1554 CG6416-RM 186..996 17..827 4055 100 Plus
Zasp66-RK 1642 CG6416-RK 186..996 17..827 4055 100 Plus
Zasp66-RF 1714 CG6416-RF 186..996 17..827 4055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:10:06
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8627424..8627730 280..586 1535 100 Plus
3L 28110227 3L 8634580..8634785 584..789 1030 100 Plus
3L 28110227 3L 8626960..8627110 133..283 755 100 Plus
3L 28110227 3L 8626394..8626512 17..135 595 100 Plus
3L 28110227 3L 8635002..8635041 788..827 200 100 Plus
Blast to na_te.dros performed on 2015-02-11 04:10:09 has no hits.

BO08046.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:36:19 Download gff for BO08046.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6416-PF 1..811 17..827 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:25:54 Download gff for BO08046.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6416-PF 1..811 17..827 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:57:58 Download gff for BO08046.5prime
Subject Subject Range Query Range Percent Splice Strand
Zasp66-RF 180..996 7..827 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:45:34 Download gff for BO08046.5prime
Subject Subject Range Query Range Percent Splice Strand
Zasp66-RF 180..996 7..827 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:45:34 Download gff for BO08046.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8626388..8626510 7..133 96 -> Plus
3L 8626961..8627109 134..282 100 -> Plus
3L 8627427..8627730 283..586 100 -> Plus
3L 8634583..8634783 587..787 100 -> Plus
3L 8635002..8635041 788..827 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:57:58 Download gff for BO08046.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8619488..8619610 7..133 96 -> Plus
arm_3L 8620061..8620209 134..282 100 -> Plus
arm_3L 8620527..8620830 283..586 100 -> Plus
arm_3L 8627683..8627883 587..787 100 -> Plus
arm_3L 8628102..8628141 788..827 100   Plus

BO08046.complete Sequence

1240 bp (1240 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ631026

> BO08046.complete
GAAGTTATCAGTCGACATGAGCCCCAAGCTGCATGAGTTTGCGGTGGTGC
TACTGCGCGATGGTCAGGCCACGCCCTGGGGCATTCGTTTGGTGGGCGGC
AACGATCTGGACACGCCGCTAATTATCACCAGGGTGCAAGTGGGCAGCCC
AGCGCATGGCGAACTTCTAAGAGGCGACATCATCTCGAAGATCGGCGAGT
ACGACGCACGCGACCTGAGTCATGCGGATGCACAGCAGCTGTTCCGCGGC
GCTGGCAACGAGATCCGCCTGGTGGTGCACAGGGACAACAAAATCGCCTA
CACGCAGGGTGCAACTCAGGAGGCAGGTCCTGGATCTCGGAGCAACTCCA
CTTTGCCGCCGGTCACTCCGGATCTGATGCCCCACCGCGGTCCGTCGCCC
TTTTTGCCCGGACCCAGCCACTTTGAGAGGGCCCTCCAGTTGCCGGTGGA
CACGTTGCCGCAGACCGTGTTTCCCCAGCTGAACTCATCCGGTGGCTATG
AGGTGCCATCGACTGTGTTCTCACCCAAGCCAACCAGGGACCATCAACAA
GACGTCGATGAGGAGCAGGCGGCCATTGTGAATCAGCCCTACCGTACAAC
TCCGCTGGTCCTGCCCGGCGCCAAAGTGAAGAAGGATGCGCCCACGACAG
AGTCCTACTTGAGGCACTACCCCAACCCGGCTGTGCGCGCCCACCCAGGA
CACGACTACCATGACAGTATCATGAAGCAGCGCGTGGCCGACACCATGCT
GCACAAGGTGGTCGGTTCGGAAGCCGACACTGGCCGCGTCTTCCACAAGC
AATTCAACTCGCCCATTGGCCTGTACTCCAACAACAACATCGAGGACACC
ATCAGATCCACAGTTCCCTTCGCCACAAGCGAAAGCAATCGCTTGAAGGA
CAGTCCTTTGCATCGTCCTTTGCCAACAAAACTTAACGGCTATAAGAAAA
CTGTCCAGTACGATCCCAGGAACAGCGAAACCTACAGAGCCATTCAAGAA
GAGGGCGGCTACAGCAACTATGGCCAATCCTCGCCACAGGAAGTGACCAT
TCCTGTGCAGACTAAGGTCTATCAGCCCAATAGATTGGTTCCAGGAAAGA
AACCAGTATCAGCGCCAGTATCCCGGCCGCCGTACAATGTGGTAAACACC
CACGATGAGAACATACGCCAGAGCGGCTCCTTCAATCGTCTCATGTACAG
CGTGATTGGTGCCACCGAGTACGCAAGCTTTCTAGACCAT

BO08046.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:34:15
Subject Length Description Subject Range Query Range Score Percent Strand
Zasp66-RF 1209 CG6416-PF 1..1206 17..1222 6030 100 Plus
Zasp66-RE 1293 CG6416-PE 200..1290 132..1222 5455 100 Plus
Zasp66-RM 969 CG6416-PM 1..923 17..939 4615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:34:17
Subject Length Description Subject Range Query Range Score Percent Strand
Zasp66-RF 1714 CG6416-RF 186..1391 17..1222 6030 100 Plus
Zasp66-RE 1725 CG6416-RE 312..1402 132..1222 5455 100 Plus
Zasp66-RM 1554 CG6416-RM 186..1108 17..939 4615 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:34:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8627424..8627730 280..586 1535 100 Plus
3L 28110227 3L 8634580..8634785 584..789 1030 100 Plus
3L 28110227 3L 8637438..8637598 939..1099 805 100 Plus
3L 28110227 3L 8626960..8627110 133..283 755 100 Plus
3L 28110227 3L 8626394..8626512 17..135 595 100 Plus
3L 28110227 3L 8638267..8638350 1139..1222 420 100 Plus
3L 28110227 3L 8635002..8635081 788..867 400 100 Plus
3L 28110227 3L 8635681..8635763 868..950 370 96.4 Plus
3L 28110227 3L 8638155..8638198 1098..1141 220 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:34:14 has no hits.

BO08046.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:13:36 Download gff for BO08046.complete
Subject Subject Range Query Range Percent Splice Strand
CG6416-RF 1..1209 17..1223 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:56:53 Download gff for BO08046.complete
Subject Subject Range Query Range Percent Splice Strand
CG6416-RF 186..1391 17..1224 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:53 Download gff for BO08046.complete
Subject Subject Range Query Range Percent Splice Strand
Zasp66-RF 186..1391 17..1224 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:13:36 Download gff for BO08046.complete
Subject Subject Range Query Range Percent Splice Strand
CG6416-RF 180..1391 7..1222 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:20:43 Download gff for BO08046.complete
Subject Subject Range Query Range Percent Splice Strand
Zasp66-RF 186..1391 17..1224 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:20:43 Download gff for BO08046.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8626394..8626510 17..133 100 -> Plus
3L 8626961..8627109 134..282 100 -> Plus
3L 8627427..8627730 283..586 100 -> Plus
3L 8634583..8634783 587..787 100 -> Plus
3L 8635002..8635081 788..867 100 -> Plus
3L 8635681..8635752 868..939 100 -> Plus
3L 8637439..8637598 940..1099 100 -> Plus
3L 8638157..8638195 1100..1138 100 -> Plus
3L 8638267..8638350 1139..1224 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:53 Download gff for BO08046.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8627683..8627883 587..787 100 -> Plus
arm_3L 8628102..8628181 788..867 100 -> Plus
arm_3L 8620061..8620209 134..282 100 -> Plus
arm_3L 8620527..8620830 283..586 100 -> Plus
arm_3L 8628781..8628852 868..939 100 -> Plus
arm_3L 8630539..8630698 940..1099 100 -> Plus
arm_3L 8631257..8631295 1100..1138 100 -> Plus
arm_3L 8631367..8631450 1139..1224 97   Plus
arm_3L 8619494..8619610 17..133 100 -> Plus

BO08046.pep Sequence

Translation from 16 to 1240

> BO08046.pep
MSPKLHEFAVVLLRDGQATPWGIRLVGGNDLDTPLIITRVQVGSPAHGEL
LRGDIISKIGEYDARDLSHADAQQLFRGAGNEIRLVVHRDNKIAYTQGAT
QEAGPGSRSNSTLPPVTPDLMPHRGPSPFLPGPSHFERALQLPVDTLPQT
VFPQLNSSGGYEVPSTVFSPKPTRDHQQDVDEEQAAIVNQPYRTTPLVLP
GAKVKKDAPTTESYLRHYPNPAVRAHPGHDYHDSIMKQRVADTMLHKVVG
SEADTGRVFHKQFNSPIGLYSNNNIEDTIRSTVPFATSESNRLKDSPLHR
PLPTKLNGYKKTVQYDPRNSETYRAIQEEGGYSNYGQSSPQEVTIPVQTK
VYQPNRLVPGKKPVSAPVSRPPYNVVNTHDENIRQSGSFNRLMYSVIGAT
EYASFLDH

BO08046.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:26:45
Subject Length Description Subject Range Query Range Score Percent Strand
Zasp66-PF 402 CG6416-PF 1..402 1..402 2124 100 Plus
Zasp66-PK 378 CG6416-PK 1..378 1..402 1963 94 Plus
Zasp66-PE 430 CG6416-PE 68..430 40..402 1920 100 Plus
Zasp66-PN 406 CG6416-PN 68..406 40..402 1759 93.4 Plus
Zasp66-PM 322 CG6416-PM 1..320 1..320 1635 97.2 Plus