Clone BO08067 Report

Search the DGRC for BO08067

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:80
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG2233-RA
Protein status:BO08067.pep: validated full length
Sequenced Size:1276

Clone Sequence Records

BO08067.3prime Sequence

904 bp (822 high quality bases) assembled on 2006-01-06

> BO08067.3prime
ATGGTCTAGAAAGCTTGCTATTGTGGTAGCCTCGGTTGTCCTGCTGACAT
TCATATTTTCATTCTCAAAGGGACCGGGAAAATTGTCCAGTTTGTGGGCC
ACATCCTCCACACGGCAGCACTGCACCATTCCAAAGGCGGGAAACTCGTG
GAGTCTGGAGAAGAGGGTGTTCCTCAGCCAGGACACTTGGTTGCACATCG
AGGGGCACAGATTGCTTAAGTCACTGCGATAGAAGGGCGAGTTGTGTCCA
ATGATGACGAACTCATCCTGTCCGGTACCGGACTTTTCCACAGCGTGAAC
ATGGGCCCAAATGTGGGCGGGAATGGGCAGGAATTTGCCACCAATCAGTT
CAATGTTGAGCGATCGGCTTCCGTTGCATGATTGCCCGGCGAACGTCGGC
AGCTTCACGGTTCCGGAAACACCCAAACGAATGTCGAAGTGGACACCGAT
GGCATCACGCATTGCCTTCGTCCAATGCTTCCAGTTGCCGGAACGCAGAA
CCTCCAACCAGACGGTGGTCAGCAAGTCCTCGTAGACAACCAAGTGTCTA
CTAACCATCTCATCCTGGACCAAACTGCCAACCTGAAAAGTGTCCTCCGT
GAACAACTGCTTCTCCTTTGCCAAGTACGCATCAAGTTCACTCTTGCTGA
TGGTCTCGAATAGATTTTTTTGGTAACTGATAGGAGTATCAAGTCCGATA
TCGTTAAGTTGTCCCAATTGGGTCTCTGGGAAAATCTGGATATTATTGAA
ATTTGTGGTATAACCAATATATTTCAATTGAAATGCGGCCAAATCATAGC
ACAATGCTGAATATTTTATTAAACCAATGCCATCGAATTTTCTTCCGACA
ACTAGAGTCATGCCCGTGCAATTTGGCAATTTGTTCATGCTCTCAAACAA
CTGA

BO08067.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:16:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG2233-PA 1245 CG2233-RA 357..1242 904..19 4430 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 10:10:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG2233-RA 1480 CG2233-RA 389..1274 904..19 4430 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 10:10:00
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8036220..8036637 232..649 2090 100 Plus
X 23542271 X 8035947..8036159 19..231 1065 100 Plus
X 23542271 X 8036900..8037080 724..904 905 100 Plus
X 23542271 X 8036726..8036804 647..725 395 100 Plus
Blast to na_te.dros performed on 2015-02-12 10:10:02 has no hits.

BO08067.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:37:00 Download gff for BO08067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2233-PA 358..1245 15..903 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:26:51 Download gff for BO08067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2233-PA 358..1245 15..903 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 20:47:24 Download gff for BO08067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2233-RA 390..1277 15..903 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 13:10:26 Download gff for BO08067.3prime
Subject Subject Range Query Range Percent Splice Strand
CG2233-RA 390..1277 15..903 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 13:10:26 Download gff for BO08067.3prime
Subject Subject Range Query Range Percent Splice Strand
X 8035943..8036159 15..231 99 <- Plus
X 8036220..8036634 232..646 100 <- Plus
X 8036726..8036802 647..723 100 <- Plus
X 8036900..8037079 724..903 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 20:47:24 Download gff for BO08067.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7929976..7930192 15..231 99 <- Plus
arm_X 7930253..7930667 232..646 100 <- Plus
arm_X 7930759..7930835 647..723 100 <- Plus
arm_X 7930933..7931112 724..903 100   Plus

BO08067.5prime Sequence

884 bp (772 high quality bases) assembled on 2006-01-06

> BO08067.5prime
GAAGTTATCAGTCGACATGTTTTCGATTAACGCCGTGATCCTGGGCATTT
TGGTTACTTCCGTTATGGCCCAGGATGCAAGGGGAACGTGTGAACTGAGC
ATCGGTTCTCCGGCTCCGGTTGTTATTAGCAATTTTGGCTCCCAGCGTTT
ATTGTTCGATTCCGTGCGAAAATTAGAACGGGAAAATTACCAGACCATTG
ACCTTTTCTGCGCGAGCGGATTTTCCATAGACTATTACAACTATTACAAC
AACCAGATCTCGACTACAATCAAAGCGACTAAACTTACAATGACCTGCGA
CCCTATTCATCGGTTTACCTATAAAGATGGCATAAAAGATGTAATTAGTG
TTCGGTGTCTGGAGGTCGGCCCTCAGTTGTTTGAGAGCATGAACAAATTG
CCAAATTGCACGGGCATGACTCTAGTTGTCGGAAGAAAATTCGATGGCAT
TGGTTTAATAAAATATTCAGCATTGTGCTATGATTTGGCCGCATTTCAAT
TGAAATATATTGGTTATACCACAAATTTCAATAATATCCAGATTTTCCCA
GAGACCCAATTGGGACAACTTAACGATATCGGACTTGATACTCCTATCAG
TTACCAAAAAAATCTATTCGAGACCATCAGCAAGAGTGAACTTGATGCGT
ACTTGGCAAAGGAGAAGCAGTTGTTCACGGAGGACACTTTTCAGGTTGGC
AGTTTGGTCCAGGATGAGATGGTTAGTAGACACTTGGTTGTCTACGAGGA
CTTGCTGACCACCGTCTGGTTGGAGGTTCTGCGTTCCGGCAACTGGAAGC
ATTGGACGAAGGCAATGCGTGATGCCATCGGTGTCCACTTCGACATTCGT
TTGGGTGTTTCCGGAACCGTGAAGCTGCCGACGT

BO08067.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:16:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG2233-PA 1245 CG2233-RA 1..868 17..884 4340 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:34:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG2233-RA 1480 CG2233-RA 33..900 17..884 4340 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:34:05
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8036900..8037212 553..241 1565 100 Minus
X 23542271 X 8036381..8036637 884..628 1285 100 Minus
X 23542271 X 8037262..8037485 240..17 1120 100 Minus
X 23542271 X 8036726..8036804 630..552 395 100 Minus
Blast to na_te.dros performed on 2015-02-13 16:34:06 has no hits.

BO08067.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:37:01 Download gff for BO08067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2233-PA 1..868 17..884 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:26:52 Download gff for BO08067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2233-PA 1..868 17..884 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:13:48 Download gff for BO08067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2233-RA 25..900 8..884 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 19:20:30 Download gff for BO08067.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2233-RA 25..900 8..884 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 19:20:30 Download gff for BO08067.5prime
Subject Subject Range Query Range Percent Splice Strand
X 8036381..8036634 631..884 100 <- Minus
X 8036726..8036802 554..630 100 <- Minus
X 8036900..8037212 241..553 100 <- Minus
X 8037262..8037493 8..240 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:13:48 Download gff for BO08067.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 7930414..7930667 631..884 100 <- Minus
arm_X 7930759..7930835 554..630 100 <- Minus
arm_X 7930933..7931245 241..553 100 <- Minus
arm_X 7931295..7931526 8..240 98   Minus

BO08067.complete Sequence

1276 bp (1276 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ631038

> BO08067.complete
GAAGTTATCAGTCGACATGTTTTCGATTAACGCCGTGATCCTGGGCATTT
TGGTTACTTCCGTTATGGCCCAGGATGCAAGGGGAACGTGTGAACTGAGC
ATCGGTTCTCCGGCTCCGGTTGTTATTAGCAATTTTGGCTCCCAGCGTTT
ATTGTTCGATTCCGTGCGAAAATTAGAACGGGAAAATTACCAGACCATTG
ACCTTTTCTGCGCGAGCGGATTTTCCATAGACTATTACAACTATTACAAC
AACCAGATCTCGACTACAATCAAAGCGACTAAACTTACAATGACCTGCGA
CCCTATTCATCGGTTTACCTATAAAGATGGCATAAAAGATGTAATTAGTG
TTCGGTGTCTGGAGGTCGGCCCTCAGTTGTTTGAGAGCATGAACAAATTG
CCAAATTGCACGGGCATGACTCTAGTTGTCGGAAGAAAATTCGATGGCAT
TGGTTTAATAAAATATTCAGCATTGTGCTATGATTTGGCCGCATTTCAAT
TGAAATATATTGGTTATACCACAAATTTCAATAATATCCAGATTTTCCCA
GAGACCCAATTGGGACAACTTAACGATATCGGACTTGATACTCCTATCAG
TTACCAAAAAAATCTATTCGAGACCATCAGCAAGAGTGAACTTGATGCGT
ACTTGGCAAAGGAGAAGCAGTTGTTCACGGAGGACACTTTTCAGGTTGGC
AGTTTGGTCCAGGATGAGATGGTTAGTAGACACTTGGTTGTCTACGAGGA
CTTGCTGACCACCGTCTGGTTGGAGGTTCTGCGTTCCGGCAACTGGAAGC
ATTGGACGAAGGCAATGCGTGATGCCATCGGTGTCCACTTCGACATTCGT
TTGGGTGTTTCCGGAACCGTGAAGCTGCCGACGTTCGCCGGGCAATCATG
CAACGGAAGCCGATCGCTCAACATTGAACTGATTGGTGGCAAATTCCTGC
CCATTCCCGCCCACATTTGGGCCCATGTTCACGCTGTGGAAAAGTCCGGT
ACCGGACAGGATGAGTTCGTCATCATTGGACACAACTCGCCCTTCTATCG
CAGTGACTTAAGCAATCTGTGCCCCTCGATGTGCAACCAAGTGTCCTGGC
TGAGGAACACCCTCTTCTCCAGACTCCACGAGTTTCCCGCCTTTGGAATG
GTGCAGTGCTGCCGTGTGGAGGATGTGGCCCACAAACTGGACAATTTTCC
CGGTCCCTTTGAGAATGAAAATATGAATGTCAGCAGGACAACCGAGGCTA
CCACAATAGCAAGCTTTCTAGACCAT

BO08067.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:59:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG2233-RA 1245 CG2233-PA 1..1242 17..1258 6210 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:59:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG2233-RA 1480 CG2233-RA 33..1274 17..1258 6210 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:59:27
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8036220..8036637 1045..628 2090 100 Minus
X 23542271 X 8036900..8037212 553..241 1565 100 Minus
X 23542271 X 8037262..8037485 240..17 1120 100 Minus
X 23542271 X 8035947..8036159 1258..1046 1065 100 Minus
X 23542271 X 8036726..8036804 630..552 395 100 Minus
Blast to na_te.dros performed on 2014-11-27 12:59:28 has no hits.

BO08067.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:13:18 Download gff for BO08067.complete
Subject Subject Range Query Range Percent Splice Strand
CG2233-RA 1..1245 17..1262 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:34:28 Download gff for BO08067.complete
Subject Subject Range Query Range Percent Splice Strand
CG2233-RA 8..1260 8..1262 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:47:39 Download gff for BO08067.complete
Subject Subject Range Query Range Percent Splice Strand
CG2233-RA 40..1274 24..1260 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:13:18 Download gff for BO08067.complete
Subject Subject Range Query Range Percent Splice Strand
CG2233-RA 8..1260 8..1262 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:08:45 Download gff for BO08067.complete
Subject Subject Range Query Range Percent Splice Strand
CG2233-RA 40..1274 24..1260 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:08:45 Download gff for BO08067.complete
Subject Subject Range Query Range Percent Splice Strand
X 8035945..8036159 1046..1260 99 <- Minus
X 8036220..8036634 631..1045 100 <- Minus
X 8036726..8036802 554..630 100 <- Minus
X 8036900..8037212 241..553 100 <- Minus
X 8037262..8037478 24..240 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:47:39 Download gff for BO08067.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 7930759..7930835 554..630 100 <- Minus
arm_X 7930933..7931245 241..553 100 <- Minus
arm_X 7931295..7931511 24..240 100   Minus
arm_X 7929978..7930192 1046..1260 99 <- Minus
arm_X 7930253..7930667 631..1045 100 <- Minus

BO08067.pep Sequence

Translation from 16 to 1276

> BO08067.pep
MFSINAVILGILVTSVMAQDARGTCELSIGSPAPVVISNFGSQRLLFDSV
RKLERENYQTIDLFCASGFSIDYYNYYNNQISTTIKATKLTMTCDPIHRF
TYKDGIKDVISVRCLEVGPQLFESMNKLPNCTGMTLVVGRKFDGIGLIKY
SALCYDLAAFQLKYIGYTTNFNNIQIFPETQLGQLNDIGLDTPISYQKNL
FETISKSELDAYLAKEKQLFTEDTFQVGSLVQDEMVSRHLVVYEDLLTTV
WLEVLRSGNWKHWTKAMRDAIGVHFDIRLGVSGTVKLPTFAGQSCNGSRS
LNIELIGGKFLPIPAHIWAHVHAVEKSGTGQDEFVIIGHNSPFYRSDLSN
LCPSMCNQVSWLRNTLFSRLHEFPAFGMVQCCRVEDVAHKLDNFPGPFEN
ENMNVSRTTEATTIASFLDH

BO08067.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:27:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG2233-PA 414 CG2233-PA 1..414 1..414 2180 100 Plus