Clone Sequence Records
BO08091.3prime Sequence
822 bp (747 high quality bases) assembled on 2006-01-06
> BO08091.3prime
ATGGTCTAGAAAGCTTGCCTGACCCATCGCTCCGCGCATGAACAGATTCT
TGACGGGCGGCAAGTTCTGGGTCAGCTGCAGACCCAAGCTGCGCAGCAAG
ACCACCGGACTGAACTGCGTGGCGTAGAGCGTGTGCAGTCCATGCACGCC
CAGCATAATGGGCACGTTCTTCGCCAGACACTTGCGCTCGTATTTGATGA
GATGCTGCTTGTCGCCGAGCTTGAAACCGGCGTATGCACCGGCGGCCAGC
GATTCCACCAGATACCGCACATCGCTGAAGCCCAGATTGACGCCCTGGCC
GGCGAGCGGATGCACTCGATGGGCGGCATCACCGACCAGAGCTGCTCCAT
TGCACACGTACGACGAGGCGTGCAGGAAACCCAATGGAAACGTGGCACGC
GACTTGTCCAGCACGCCGCACACCCGTGGCGGATATTGCACCTGGTGCTG
GCTGCCGTTGTGTCCAAACAAGGAGTTCAGCGCCTGGACAGCCTTGTCTG
CGAGCTCAACGCGCGGATACTGCCGGCAGAAGGCTTCGTTGAGGGCGTCT
ACGAATTCTGTGGGTGGTAGGGCTTGCAGCATTTTCGCTTGCTCGTTGGT
GGTGCTCCAGACCAGGGAGCTCAGCCTGTCCGTTAGTGGTAGCAGTGCCA
CTGGTCCATTGGGCAGAAACCTCTGCCACGCCACGGAATTATCACAGGCA
TCTTCGCCGAGTTCCAGCGTAGCCACCAGGCCCATGCGGTCGTAGTTCAG
GGAAAATACATCCACGTTCATCTCCTTTCTGACCACGGAATTGGCGCCAT
CCGCTCCGATCAGCAAATCGCA
BO08091.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:17:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-PA | 1434 | CG7277-RA | 628..1431 | 822..19 | 4020 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:34:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-RA | 1604 | CG7277-RA | 704..1507 | 822..19 | 4020 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:34:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5530717..5531520 | 19..822 | 4020 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-13 16:34:24 has no hits.
BO08091.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:37:40 Download gff for
BO08091.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-PA | 629..1434 | 18..821 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:27:50 Download gff for
BO08091.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-PA | 629..1434 | 18..821 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:13:51 Download gff for
BO08091.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 705..1507 | 19..821 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 19:21:13 Download gff for
BO08091.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 705..1507 | 19..821 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 19:21:13 Download gff for
BO08091.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5530717..5531519 | 19..821 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:13:51 Download gff for
BO08091.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5530717..5531519 | 19..821 | 100 | | Plus |
BO08091.5prime Sequence
912 bp (791 high quality bases) assembled on 2006-01-06
> BO08091.5prime
GAAGTTATCAGTCGACATGTTGGGTGTTCTACGTATCCAAGGAGCGTTGG
CTTCGGCGGGGCAGGCGCGTCTTCTGTCCGTCCGCCTGCTGGCCAGCAAA
TCCACCACTGACATGACCACAAACCGCGGTGAATCCACACAATCGACGTC
CACCGAACACTTTGATATAATCATCGGAGGCGGCGGACTGGTGGGCACCA
CATTGGCCGCAGCTCTGGCCAAGAACTCGACGTTGGCGGACAAGAAGGTA
CTGCTGCTGGAAGGTGCGCCCGAGTTCCGGGGATTTAATCCCACTGGGCC
ATACCAGAATCGCGTATCCGCCATCAATCACAACTCCATCGAGCTGTTCA
AGTCCATTGATGCGTGGAAGCACATCGAGTCGGCGCGCTACAAGCCCGTC
AAGCAGATGCAGGTGTGGGAGTCCAACACGGACGCACTGATCCAGTTCCA
GCACGATAACTTTGCCAGCGACGTGGCCTGCATCATTGAGAACGATTTGA
TCCTGGATGCGGTCTATGCGCTGGCCAAGGAATCACCCAATGTGGAGATC
CTCAACAAGGCCAGAATCCAGTGCGTTCGCCTGCCCAGGGACTCCAACTC
CAATCACTCCGAGCTGCAGCTAGAGGATGGACGCAACTTTTCCTGCGATT
TGCTGATCGGAGCGGATGGCGCCAATTCCGTGGTCAGAAAGGAGATGAAC
GTGGATGTATTTTCCCTGAACTACGACCGCATGGGCCTGGTGGCTACGCT
GGAACTCGGCGAAGATGCCTGTGATAATTCCGTGGCGTGGCAGAGGTTTC
TGCCCAATGGACCAGTGGCACTGCTACCACTAACGGACAGGCTGAGCTCC
CTGGTCTGGAGCACACCAACGAGCAAGCGAAATGCTGCAAGCCCTACACC
CACAGAATTCGT
BO08091.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:17:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-PA | 1434 | CG7277-RA | 1..848 | 17..864 | 4240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 16:40:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-RA | 1604 | CG7277-RA | 77..975 | 17..912 | 4420 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 16:40:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5531249..5532147 | 912..17 | 4345 | 99.7 | Minus |
Blast to na_te.dros performed on 2015-02-10 16:40:34 has no hits.
BO08091.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:37:41 Download gff for
BO08091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-PA | 1..899 | 17..912 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:27:51 Download gff for
BO08091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-PA | 1..899 | 17..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:11:36 Download gff for
BO08091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 77..975 | 17..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:19:59 Download gff for
BO08091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 77..975 | 17..912 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:19:59 Download gff for
BO08091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5531249..5532147 | 17..912 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:11:36 Download gff for
BO08091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5531249..5532147 | 17..912 | 99 | | Minus |
BO08091.complete Sequence
1465 bp (1465 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ631046
> BO08091.complete
GAAGTTATCAGTCGACATGTTGGGTGTTCTACGTATCCAAGGAGCGTTGG
CTTCGGCGGGGCAGGCGCGTCTTCTGTCCGTCCGCCTGCTGGCCAGCAAA
TCCACCACTGACATGACCACAAACCGCGGTGAATCCACACAATCGACGTC
CACCGAACACTTTGATATAATCATCGGAGGCGGCGGACTGGTGGGCACCA
CATTGGCCGCAGCTCTGGCCAAGAACTCGACGTTGGCGGACAAGAAGGTA
CTGCTGCTGGAAGGTGCGCCCGAGTTCCGGGGATTTAATCCCACTGGGCC
ATACCAGAATCGCGTATCCGCCATCAATCACAACTCCATCGAGCTGTTCA
AGTCCATTGATGCGTGGAAGCACATCGAGTCGGCGCGCTACAAGCCCGTC
AAGCAGATGCAGGTGTGGGAGTCCAACACGGACGCACTGATCCAGTTCCA
GCACGATAACTTTGCCAGCGACGTGGCCTGCATCATTGAGAACGATTTGA
TCCTGGATGCGGTCTATGCGCTGGCCAAGGAATCACCCAATGTGGAGATC
CTCAACAAGGCCAGAATCCAGTGCGTTCGCCTGCCCAGGGACTCCAACTC
CAATCACTCCGAGCTGCAGCTAGAGGATGGACGCAACTTTTCCTGCGATT
TGCTGATCGGAGCGGATGGCGCCAATTCCGTGGTCAGAAAGGAGATGAAC
GTGGATGTATTTTCCCTGAACTACGACCGCATGGGCCTGGTGGCTACGCT
GGAACTCGGCGAAGATGCCTGTGATAATTCCGTGGCGTGGCAGAGGTTTC
TGCCCAATGGACCAGTGGCACTGCTACCACTAACGGACAGGCTGAGCTCC
CTGGTCTGGAGCACCACCAACGAGCAAGCGAAAATGCTGCAAGCCCTACC
ACCCACAGAATTCGTAGACGCCCTCAACGAAGCCTTCTGCCGGCAGTATC
CGCGCGTTGAGCTCGCAGACAAGGCTGTCCAGGCGCTGAACTCCTTGTTT
GGACACAACGGCAGCCAGCACCAGGTGCAATATCCGCCACGGGTGTGCGG
CGTGCTGGACAAGTCGCGTGCCACGTTTCCATTGGGTTTCCTGCACGCCT
CGTCGTACGTGTGCAATGGAGCAGCTCTGGTCGGTGATGCCGCCCATCGA
GTGCATCCGCTCGCCGGCCAGGGCGTCAATCTGGGCTTCAGCGATGTGCG
GTATCTGGTGGAATCGCTGGCCGCCGGTGCATACGCCGGTTTCAAGCTCG
GCGACAAGCAGCATCTCATCAAATACGAGCGCAAGTGTCTGGCGAAGAAC
GTGCCCATTATGCTGGGCGTGCATGGACTGCACACGCTCTACGCCACGCA
GTTCAGTCCGGTGGTCTTGCTGCGCAGCTTGGGTCTGCAGCTGACCCAGA
ACTTGCCGCCCGTCAAGAATCTGTTCATGCGCGGAGCGATGGGTCAGGCA
AGCTTTCTAGACCAT
BO08091.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:56:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-RA | 1434 | CG7277-PA | 1..1431 | 17..1447 | 7155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:56:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-RA | 1604 | CG7277-RA | 77..1507 | 17..1447 | 7155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:56:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5530717..5532147 | 1447..17 | 7155 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:56:32 has no hits.
BO08091.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:13:23 Download gff for
BO08091.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 1..1434 | 17..1448 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:34:33 Download gff for
BO08091.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 49..1479 | 17..1447 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:34:43 Download gff for
BO08091.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 82..1507 | 22..1449 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:13:23 Download gff for
BO08091.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 49..1479 | 17..1447 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:29:05 Download gff for
BO08091.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 82..1507 | 22..1449 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:29:05 Download gff for
BO08091.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5530715..5532142 | 22..1449 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:34:43 Download gff for
BO08091.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5530715..5532142 | 22..1449 | 99 | | Minus |
BO08091.pep Sequence
Translation from 16 to 1465
> BO08091.pep
MLGVLRIQGALASAGQARLLSVRLLASKSTTDMTTNRGESTQSTSTEHFD
IIIGGGGLVGTTLAAALAKNSTLADKKVLLLEGAPEFRGFNPTGPYQNRV
SAINHNSIELFKSIDAWKHIESARYKPVKQMQVWESNTDALIQFQHDNFA
SDVACIIENDLILDAVYALAKESPNVEILNKARIQCVRLPRDSNSNHSEL
QLEDGRNFSCDLLIGADGANSVVRKEMNVDVFSLNYDRMGLVATLELGED
ACDNSVAWQRFLPNGPVALLPLTDRLSSLVWSTTNEQAKMLQALPPTEFV
DALNEAFCRQYPRVELADKAVQALNSLFGHNGSQHQVQYPPRVCGVLDKS
RATFPLGFLHASSYVCNGAALVGDAAHRVHPLAGQGVNLGFSDVRYLVES
LAAGAYAGFKLGDKQHLIKYERKCLAKNVPIMLGVHGLHTLYATQFSPVV
LLRSLGLQLTQNLPPVKNLFMRGAMGQASFLDH
BO08091.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:27:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-PA | 477 | CG7277-PA | 1..477 | 1..477 | 2450 | 100 | Plus |
