Clone BO08095 Report

Search the DGRC for BO08095

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:80
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptCG15658-RA
Protein status:BO08095.pep: validated full length
Sequenced Size:1063

Clone Sequence Records

BO08095.3prime Sequence

938 bp (741 high quality bases) assembled on 2006-01-06

> BO08095.3prime
ATGGTCTAGAAAGCTTGCTTTTCGGGCAATATCACAGTGCAGAGGCTCGT
CCTCCGGCTGACGGTTGTTGATGGCGTTTCTGGGCGAGATCACAAACGGC
TTTCGCTTCTGGGCATTCCTCTTTCGTCGCTGGGCTCGTTTTCTCCTACA
GTGTATCACGCAGAAGATGACAATTAAAAGCACAAAACAAACTCCGCCAA
AGCAGCCAGCTCCAAAGAGCCAGAAGCTGCGCGTTTCGGCAAACTGCAGT
GTCGTCTGGCAACTGGCGAATGTTGGCGAATGGATCGTTCGATTGTAGGG
CAGTGGACACTCGCGGATGTCGAGCGCCTCCAAGCAAACTGGCACGAACT
TCGGACTGGCGCCGAGCATCATAAGATGGTTGGTGACCTGCTGGCAGCCA
CACTGGCTCAACTGCGACTTGGTCAGATCGATGACCTGCAGGTGGCACAT
ATTCGCCAGGCTGTCGATCCTGAAGTTCTGCAGCGGATTCATCGAGGCAT
TCAGTTGCCAGAGTTTTGGAAGTATGCCCAGATCGGGTAACTCCTGTAGC
TCGCAACCTGCCACGTTCAGGTACTCCAGTGGAGCACGAATGGGCTTCTC
CAGTGCCTGAAGATTGAGGGATGTTAGCTCATTGCTATCGATGTATAGGT
TTCTCAGTCGCGGCAGCTGGAACAACTCCAGCGGTATCGTTGTCAGTCCA
TTATTCGAAAGATCAATTTCCTGGAGCGAGGTGAGTGGCTCGAAGGTTCC
CACCTCCACCGATAAGATCATGTTATCATAGAGCATCAGAAACTTAATGT
CCGTGTATCGCTGAAACGAGCTAGTTTTCAGCTTCCTGATGCGATTGTGC
GATAGATCCAGAACCTCCACCGAACTCTTGAGGTTCTGTGGCACCTCCTT
GAGGTCCAAGTCGTACCAACGAATCCGGAGCAGCTTAT

BO08095.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:17:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG15658-PA 1032 CG15658-RA 110..1029 938..19 4575 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:05:17
Subject Length Description Subject Range Query Range Score Percent Strand
Lapsyn-RA 1630 CG15658-RA 409..1328 938..19 4585 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:05:09
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21198226..21198434 724..516 1045 100 Minus
2R 25286936 2R 21198492..21198677 515..330 930 100 Minus
2R 25286936 2R 21198761..21198917 330..174 785 100 Minus
2R 25286936 2R 21198975..21199129 173..19 775 100 Minus
2R 25286936 2R 21198019..21198165 866..720 735 100 Minus
2R 25286936 2R 21197720..21197795 938..863 365 98.7 Minus
Blast to na_te.dros performed on 2015-02-11 03:05:14 has no hits.

BO08095.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:37:49 Download gff for BO08095.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15658-PA 110..1032 18..938 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:28:00 Download gff for BO08095.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15658-PA 110..1032 18..938 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:24:22 Download gff for BO08095.3prime
Subject Subject Range Query Range Percent Splice Strand
Lapsyn-RA 409..1337 10..938 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:25:53 Download gff for BO08095.3prime
Subject Subject Range Query Range Percent Splice Strand
Lapsyn-RA 409..1337 10..938 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:25:53 Download gff for BO08095.3prime
Subject Subject Range Query Range Percent Splice Strand
2R 21197720..21197793 865..938 98 -> Minus
2R 21198021..21198164 721..864 100 -> Minus
2R 21198230..21198434 516..720 100 -> Minus
2R 21198492..21198677 330..515 100 -> Minus
2R 21198762..21198917 174..329 100 -> Minus
2R 21198975..21199138 10..173 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:24:22 Download gff for BO08095.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17085225..17085298 865..938 98 -> Minus
arm_2R 17085526..17085669 721..864 100 -> Minus
arm_2R 17085735..17085939 516..720 100 -> Minus
arm_2R 17085997..17086182 330..515 100 -> Minus
arm_2R 17086267..17086422 174..329 100 -> Minus
arm_2R 17086480..17086643 10..173 97   Minus

BO08095.5prime Sequence

866 bp (805 high quality bases) assembled on 2006-01-06

> BO08095.5prime
GAAGTTATCAGTCGACATGGAACTGCATTGGCAGCTGCTGACGTTCATCG
TGTGCCTCCAGTTGTTGCATTCCGCCGGATTCATCATTCAGTCGGAAGTG
CGCAAGTGCACGTACGGCCATATCGATAAGCTGCTCCGGATTCGTTGCTA
CGACTTGGACCTCAAGGAGGTGCCACAGAACCTCAAGAGTTCGGTGGAGG
TTCTGGATCTATCGCACAATCGCATCAGGAAGCTGAAAACTAGCTCGTTT
CAGCGATACACGGACATTAAGTTTCTGATGCTCTATGATAACATGATCTT
ATCGGTGGAGGTGGGAACCTTCGAGCCACTCACCTCGCTCCAGGAAATTG
ATCTTTCGAATAATGGACTGACAACGATACCGCTGGAGTTGTTCCAGCTG
CCGCGACTGAGAAACCTATACATCGATAGCAATGAGCTAACATCCCTCAA
TCTTCAGGCACTGGAGAAGCCCATTCGTGCTCCACTGGAGTACCTGAACG
TGGCAGGTTGCGAGCTACAGGAGTTACCCGATCTGGGCATACTTCCAAAA
CTCTGGCAACTGAATGCCTCGATGAATCCGCTGCAGAACTTCAGGATCGA
CAGCCTGGCGAATATGTGCCACCTGCAGGTCATCGATCTGACCAAGTCGC
AGTTGAGCCAGTGTGGCTGCCAGCAGGTCACCAACCATCTTATGATGCTC
GGCGCCAGTCCGAAGTTCGTGCCAGTTTGCTTGGAGGCGCTCGACATCCG
CGAGTGTCCACTGCCCTACAATCGAACGATCCATTCGCCAACATTCGCCA
GTTGCCAGACGACACTGCAGTTTGCCGAAACGCGCAGCTTCTGGCTCTTT
GGAGCTGGCTGCTTTT

BO08095.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:17:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG15658-PA 1032 CG15658-RA 1..849 17..865 4245 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 00:28:02
Subject Length Description Subject Range Query Range Score Percent Strand
Lapsyn-RA 1630 CG15658-RA 299..1148 16..865 4250 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 00:27:56
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21198226..21198434 340..548 1045 100 Plus
2R 25286936 2R 21197610..21197795 16..201 930 100 Plus
2R 25286936 2R 21198492..21198677 549..734 930 100 Plus
2R 25286936 2R 21198019..21198165 198..344 735 100 Plus
2R 25286936 2R 21198761..21198892 734..865 660 100 Plus
Blast to na_te.dros performed on 2015-02-13 00:27:59 has no hits.

BO08095.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:37:50 Download gff for BO08095.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15658-PA 1..849 17..866 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:28:02 Download gff for BO08095.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15658-PA 1..849 17..866 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-31 20:32:38 Download gff for BO08095.5prime
Subject Subject Range Query Range Percent Splice Strand
Lapsyn-RA 292..1148 9..866 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 02:43:48 Download gff for BO08095.5prime
Subject Subject Range Query Range Percent Splice Strand
Lapsyn-RA 292..1148 9..866 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 02:43:48 Download gff for BO08095.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 21197601..21197793 5..199 97 -> Plus
2R 21198021..21198164 200..343 100 -> Plus
2R 21198230..21198434 344..548 100 -> Plus
2R 21198492..21198677 549..734 100 -> Plus
2R 21198762..21198892 735..866 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-31 20:32:38 Download gff for BO08095.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17085106..17085298 5..199 97 -> Plus
arm_2R 17085526..17085669 200..343 100 -> Plus
arm_2R 17085735..17085939 344..548 100 -> Plus
arm_2R 17085997..17086182 549..734 100 -> Plus
arm_2R 17086267..17086397 735..866 99   Plus

BO08095.complete Sequence

1063 bp (1063 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ631049

> BO08095.complete
GAAGTTATCAGTCGACATGGAACTGCATTGGCAGCTGCTGACGTTCATCG
TGTGCCTCCAGTTGTTGCATTCCGCCGGATTCATCATTCAGTCGGAAGTG
CGCAAGTGCACGTACGGCCATATCGATAAGCTGCTCCGGATTCGTTGCTA
CGACTTGGACCTCAAGGAGGTGCCACAGAACCTCAAGAGTTCGGTGGAGG
TTCTGGATCTATCGCACAATCGCATCAGGAAGCTGAAAACTAGCTCGTTT
CAGCGATACACGGACATTAAGTTTCTGATGCTCTATGATAACATGATCTT
ATCGGTGGAGGTGGGAACCTTCGAGCCACTCACCTCGCTCCAGGAAATTG
ATCTTTCGAATAATGGACTGACAACGATACCGCTGGAGTTGTTCCAGCTG
CCGCGACTGAGAAACCTATACATCGATAGCAATGAGCTAACATCCCTCAA
TCTTCAGGCACTGGAGAAGCCCATTCGTGCTCCACTGGAGTACCTGAACG
TGGCAGGTTGCGAGCTACAGGAGTTACCCGATCTGGGCATACTTCCAAAA
CTCTGGCAACTGAATGCCTCGATGAATCCGCTGCAGAACTTCAGGATCGA
CAGCCTGGCGAATATGTGCCACCTGCAGGTCATCGATCTGACCAAGTCGC
AGTTGAGCCAGTGTGGCTGCCAGCAGGTCACCAACCATCTTATGATGCTC
GGCGCCAGTCCGAAGTTCGTGCCAGTTTGCTTGGAGGCGCTCGACATCCG
CGAGTGTCCACTGCCCTACAATCGAACGATCCATTCGCCAACATTCGCCA
GTTGCCAGACGACACTGCAGTTTGCCGAAACGCGCAGCTTCTGGCTCTTT
GGAGCTGGCTGCTTTGGCGGAGTTTGTTTTGTGCTTTTAATTGTCATCTT
CTGCGTGATACACTGTAGGAGAAAACGAGCCCAGCGACGAAAGAGGAATG
CCCAGAAGCGAAAGCCGTTTGTGATCTCGCCCAGAAACGCCATCAACAAC
CGTCAGCCGGAGGACGAGCCTCTGCACTGTGATATTGCCCGAAAAGCAAG
CTTTCTAGACCAT

BO08095.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:55
Subject Length Description Subject Range Query Range Score Percent Strand
Lapsyn-RA 1032 CG15658-PA 1..1029 17..1045 5145 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:56
Subject Length Description Subject Range Query Range Score Percent Strand
Lapsyn-RA 1630 CG15658-RA 299..1328 16..1045 5150 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:52
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21198226..21198434 340..548 1045 100 Plus
2R 25286936 2R 21197610..21197795 16..201 930 100 Plus
2R 25286936 2R 21198492..21198677 549..734 930 100 Plus
2R 25286936 2R 21198761..21198917 734..890 785 100 Plus
2R 25286936 2R 21198975..21199129 891..1045 775 100 Plus
2R 25286936 2R 21198019..21198165 198..344 735 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:45:54 has no hits.

BO08095.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:13:25 Download gff for BO08095.complete
Subject Subject Range Query Range Percent Splice Strand
CG15658-RA 1..1032 17..1046 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:34:34 Download gff for BO08095.complete
Subject Subject Range Query Range Percent Splice Strand
CG15658-RA 290..1335 9..1054 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:56 Download gff for BO08095.complete
Subject Subject Range Query Range Percent Splice Strand
Lapsyn-RA 300..1324 17..1041 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:13:25 Download gff for BO08095.complete
Subject Subject Range Query Range Percent Splice Strand
CG15658-RA 290..1335 9..1054 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:11 Download gff for BO08095.complete
Subject Subject Range Query Range Percent Splice Strand
Lapsyn-RA 300..1324 17..1041 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:11 Download gff for BO08095.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21197611..21197793 17..199 100 -> Plus
2R 21198021..21198164 200..343 100 -> Plus
2R 21198230..21198434 344..548 100 -> Plus
2R 21198492..21198677 549..734 100 -> Plus
2R 21198762..21198917 735..890 100 -> Plus
2R 21198975..21199125 891..1041 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:56 Download gff for BO08095.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17085116..17085298 17..199 100 -> Plus
arm_2R 17085526..17085669 200..343 100 -> Plus
arm_2R 17085735..17085939 344..548 100 -> Plus
arm_2R 17085997..17086182 549..734 100 -> Plus
arm_2R 17086267..17086422 735..890 100 -> Plus
arm_2R 17086480..17086630 891..1041 100   Plus

BO08095.pep Sequence

Translation from 16 to 1063

> BO08095.pep
MELHWQLLTFIVCLQLLHSAGFIIQSEVRKCTYGHIDKLLRIRCYDLDLK
EVPQNLKSSVEVLDLSHNRIRKLKTSSFQRYTDIKFLMLYDNMILSVEVG
TFEPLTSLQEIDLSNNGLTTIPLELFQLPRLRNLYIDSNELTSLNLQALE
KPIRAPLEYLNVAGCELQELPDLGILPKLWQLNASMNPLQNFRIDSLANM
CHLQVIDLTKSQLSQCGCQQVTNHLMMLGASPKFVPVCLEALDIRECPLP
YNRTIHSPTFASCQTTLQFAETRSFWLFGAGCFGGVCFVLLIVIFCVIHC
RRKRAQRRKRNAQKRKPFVISPRNAINNRQPEDEPLHCDIARKASFLDH

BO08095.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:26:58
Subject Length Description Subject Range Query Range Score Percent Strand
Lapsyn-PA 343 CG15658-PA 1..343 1..343 1802 100 Plus
sli-PB 1469 CG43758-PB 82..238 40..203 202 34.1 Plus
sli-PD 1480 CG43758-PD 82..238 40..203 202 34.1 Plus
sli-PA 1480 CG43758-PA 82..238 40..203 202 34.1 Plus
rk-PA 1360 CG8930-PA 159..345 38..223 183 30.7 Plus