Clone Sequence Records
BO08133.3prime Sequence
974 bp (871 high quality bases) assembled on 2006-01-06
> BO08133.3prime
ATGGTCTAGAAAGCTTGCGTAGTCGTAGGTGTTCGTTGCCGTGGTGGTCT
CGTCCAGCGGCACGAACATGTCCATTTTTTCGTAGTCCTGCGGCGTTATG
TGCTTGTGGCTGGTCCACATGGCATACGCCTTCTGGTCGGTAGCTGTCAG
GGGCTTGAAGTTCTTCGGATCGGTCGTTTCCGACATGCTGAGCTTGGAGT
TGTAGCGTGTGTACATGAAGATGCGGTACCGCCAGGCGTCAAAGGTCTGC
TTCCAGTCCTCTACGTTCTTTACGGCGCCTTGGGGAACACTATTCAGCAT
GTGGGCCAATTTTGCCCACAATGGTTCAGTGAGGCCATCGTGCCGGCGGT
GGTTTGATAGCATGCATGGATTGTCCTCGAAAAACTTAACGTACAGCTCC
TTTTGGTCCTTGGACATGCGTTCGCCGCGTTTTCTAAAGCGACTCATCAG
ACCCGGTGTGTAAGGCGACTGTTGGGAGGTATTTGGTGCATTCATCGACG
GCAAAGGATGCGTGTAGCTGGGGAAGATCTGCTGACCGGGCAGCAACTGC
TGCTGGTGCTGTTGCTGCTGGGCTTGGTGCTGTTCCTGGCGCGCTAGGAA
TCTGGAGGCCCGCTGCAGACGTTCCACCTCCGATTCGGACTCCGACTTGG
GTATAATATCCATGGGGTCAATGGCCTGGGTCATCGATTCCGGCGTCCGT
TCCGAGTAAGCCTGCCCCAGGCGCAGTTTGTGGGAACTATCCGTGCGTTC
CGGCACCGAGTTGTTGCCCTGCTGGTCCAGTGGCGAGTCCACCGCCTCAG
AACTCATACGTANGGCCGGAGAGGTGGGCTGGGAGTCAGGCACATATTCA
TGGGCGTGGTGCGAGGCGCTTTCGTTTGACCGCTGCGGCAGAGGCACGTG
GTGCTGGTGCTGATGAGGGTGGTGCTTCAGGACCGCCATCGAGCATGAGG
GCTCGTAGGAGAGCATGTCGACTG
BO08133.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:17:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12022-PA | 951 | CG12022-RA | 1..948 | 966..19 | 4721 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:22:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42676-RE | 1577 | CG42676-RE | 549..1496 | 966..19 | 4729 | 99.9 | Minus |
| CG42676-RC | 1411 | CG42676-RC | 383..1330 | 966..19 | 4729 | 99.9 | Minus |
| CG42676-RF | 1668 | CG42676-RF | 1104..1221 | 308..191 | 185 | 78.2 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 17:22:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1803821..1804355 | 966..432 | 2664 | 99.8 | Minus |
| 3L | 28110227 | 3L | 1804417..1804829 | 431..19 | 2065 | 100 | Minus |
| 3L | 28110227 | 3L | 1806356..1806473 | 308..191 | 185 | 77.1 | Minus |
Blast to na_te.dros performed 2015-02-10 17:22:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2781..2849 | 597..529 | 174 | 72.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6811..6856 | 592..547 | 158 | 82.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6819 | 592..530 | 153 | 71.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6785 | 592..543 | 151 | 78 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2383 | 590..513 | 149 | 67.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6778..6823 | 592..547 | 149 | 80.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1506..1565 | 609..547 | 137 | 71.4 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1110..1149 | 587..548 | 137 | 82.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6790..6865 | 592..518 | 134 | 65.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1541..1586 | 592..547 | 131 | 76.1 | Minus |
| invader4 | 3105 | invader4 INVADER4 3105bp | 81..135 | 871..925 | 131 | 70.9 | Plus |
| invader4 | 3105 | invader4 INVADER4 3105bp | 2840..2894 | 871..925 | 131 | 70.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2336..2380 | 592..548 | 126 | 75.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2351..2431 | 592..513 | 123 | 63 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6795 | 584..513 | 120 | 66.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2446..2518 | 584..513 | 119 | 64.4 | Minus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7943..8022 | 582..507 | 119 | 66.2 | Minus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9387..9466 | 582..507 | 119 | 66.2 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1072..1134 | 592..530 | 117 | 65.1 | Minus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 95..196 | 624..529 | 117 | 63.1 | Minus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9125..9226 | 624..529 | 117 | 63.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2765..2825 | 589..529 | 116 | 65.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2390..2470 | 592..513 | 114 | 61.7 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1117..1164 | 592..545 | 114 | 70.8 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2616..2659 | 591..548 | 112 | 72.7 | Minus |
BO08133.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:38:52 Download gff for
BO08133.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12022-PA | 1..951 | 15..966 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:29:36 Download gff for
BO08133.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12022-PA | 1..951 | 15..966 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:12:08 Download gff for
BO08133.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42676-RC | 376..1333 | 15..974 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:26:03 Download gff for
BO08133.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42676-RC | 376..1333 | 15..974 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:26:03 Download gff for
BO08133.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1803814..1804355 | 432..974 | 99 | -> | Minus |
| 3L | 1804417..1804832 | 15..431 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:12:08 Download gff for
BO08133.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1803814..1804355 | 432..974 | 99 | -> | Minus |
| arm_3L | 1804417..1804832 | 15..431 | 99 | | Minus |
BO08133.5prime Sequence
934 bp (800 high quality bases) assembled on 2006-01-06
> BO08133.5prime
GAAGTTATCAGTCGACATGCTCTCCTACGAGCCCTCATGCTCGATGGCGG
TCCTGAAGCACCACCCTCATCAGCACCAGCACCACGTGCCTCTGCCGCAG
CGGTCAAACGAAAGCGCCTCGCACCACGCCCATGAATATGTGCCTGACTC
CCAGCCCACCTCTCCGGCCCTACGTATGAGTTCTGAGGCGGTGGACTCGC
CACTGGACCAGCAGGGCAACAACTCGGTGCCGGAACGCACGGATAGTTCC
CACAAACTGCGCCTGGGGCAGGCTTACTCGGAACGGACGCCGGAATCGAT
GACCCAGGCCATTGACCCCATGGATATTATACCCAAGTCGGAGTCCGAAT
CGGAGGTGGAACGTCTGCAGCGGGCCTCCAGATTCCTAGCGCGCCAGGAA
CAGCACCAAGCCCAGCAGCAACAGCACCAGCAGCAGTTGCTGCCCGGTCA
GCAGATCTTCCCCAGCTACACGCATCCTTTGCCGTCGATGAATGCACCAA
ATACCTCCCAACAGTCGCCTTACACACCGGGTCTGATGAGTCGCTTTAGA
AAACGCGGCGAACGCATGTCCAAGGACCAAAAGGAGCTGTACGTTAAGTT
TTTCGAGGACAATCCATGCATGCTATCAAACCACCGCCGGCACGATGGCC
TCACTGAACCATTGTGGGCAAAATTGGCCCACATGCTGAATAGTGTTCCC
CAAGGCGCCGTAAAGAACGTAGAGGACTGGAAGCAGACCTTTGACGCCTG
GCGGTACCGCATCTTCATGTACACACGCTACAACTCCAAGCTCAGCATGT
CGGAAACGACCGATCCGAAGAACTTCAAGCCCCTGACAGCTACCGACCAG
AAGGCGTATGCCATGTGGACCAGCCACAAGCACATAACGCCGCAGGACTA
CGAAAAAATGGACATGTTCGTGCCGCTGGACGAG
BO08133.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:17:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12022-PA | 951 | CG12022-RA | 1..918 | 17..934 | 4590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:05:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42676-RE | 1577 | CG42676-RE | 549..1466 | 17..934 | 4590 | 100 | Plus |
| CG42676-RC | 1411 | CG42676-RC | 383..1300 | 17..934 | 4590 | 100 | Plus |
| CG42676-RF | 1668 | CG42676-RF | 1104..1221 | 675..792 | 185 | 78.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:05:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1803821..1804355 | 17..551 | 2675 | 100 | Plus |
| 3L | 28110227 | 3L | 1804417..1804799 | 552..934 | 1915 | 100 | Plus |
| 3L | 28110227 | 3L | 1806356..1806473 | 675..792 | 185 | 77.1 | Plus |
Blast to na_te.dros performed 2015-02-13 07:05:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2781..2849 | 386..454 | 174 | 72.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6811..6856 | 391..436 | 158 | 82.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6819 | 391..453 | 153 | 71.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6785 | 391..440 | 151 | 78 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2383 | 393..470 | 149 | 67.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6778..6823 | 391..436 | 149 | 80.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1506..1565 | 374..436 | 137 | 71.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1110..1149 | 396..435 | 137 | 82.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6790..6865 | 391..465 | 134 | 65.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1541..1586 | 391..436 | 131 | 76.1 | Plus |
| invader4 | 3105 | invader4 INVADER4 3105bp | 81..135 | 112..58 | 131 | 70.9 | Minus |
| invader4 | 3105 | invader4 INVADER4 3105bp | 2840..2894 | 112..58 | 131 | 70.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2336..2380 | 391..435 | 126 | 75.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2351..2431 | 391..470 | 123 | 63 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6795 | 399..470 | 120 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2446..2518 | 399..470 | 119 | 64.4 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7943..8022 | 401..476 | 119 | 66.2 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9387..9466 | 401..476 | 119 | 66.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1072..1134 | 391..453 | 117 | 65.1 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 95..196 | 359..454 | 117 | 63.1 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9125..9226 | 359..454 | 117 | 63.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2765..2825 | 394..454 | 116 | 65.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2390..2470 | 391..470 | 114 | 61.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1117..1164 | 391..438 | 114 | 70.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2616..2659 | 392..435 | 112 | 72.7 | Plus |
BO08133.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:38:53 Download gff for
BO08133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12022-PA | 1..918 | 17..934 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:29:37 Download gff for
BO08133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12022-PA | 1..918 | 17..934 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:10:37 Download gff for
BO08133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42676-RC | 378..1300 | 10..934 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:22:02 Download gff for
BO08133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42676-RC | 378..1300 | 10..934 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:22:02 Download gff for
BO08133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1803816..1804355 | 10..551 | 99 | -> | Plus |
| 3L | 1804417..1804799 | 552..934 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:10:37 Download gff for
BO08133.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1803816..1804355 | 10..551 | 99 | -> | Plus |
| arm_3L | 1804417..1804799 | 552..934 | 100 | | Plus |
BO08133.complete Sequence
982 bp (982 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ631068
> BO08133.complete
GAAGTTATCAGTCGACATGCTCTCCTACGAGCCCTCATGCTCGATGGCGG
TCCTGAAGCACCACCCTCATCAGCACCAGCACCACGTGCCTCTGCCGCAG
CGGTCAAACGAAAGCGCCTCGCACCACGCCCATGAATATGTGCCTGACTC
CCAGCCCACCTCTCCGGCCCTACGTATGAGTTCTGAGGCGGTGGACTCGC
CACTGGACCAGCAGGGCAACAACTCGGTGCCGGAACGCACGGATAGTTCC
CACAAACTGCGCCTGGGGCAGGCTTACTCGGAACGGACGCCGGAATCGAT
GACCCAGGCCATTGACCCCATGGATATTATACCCAAGTCGGAGTCCGAAT
CGGAGGTGGAACGTCTGCAGCGGGCCTCCAGATTCCTAGCGCGCCAGGAA
CAGCACCAAGCCCAGCAGCAACAGCACCAGCAGCAGTTGCTGCCCGGTCA
GCAGATCTTCCCCAGCTACACGCATCCTTTGCCGTCGATGAATGCACCAA
ATACCTCCCAACAGTCGCCTTACACACCGGGTCTGATGAGTCGCTTTAGA
AAACGCGGCGAACGCATGTCCAAGGACCAAAAGGAGCTGTACGTTAAGTT
TTTCGAGGACAATCCATGCATGCTATCAAACCACCGCCGGCACGATGGCC
TCACTGAACCATTGTGGGCAAAATTGGCCCACATGCTGAATAGTGTTCCC
CAAGGCGCCGTAAAGAACGTAGAGGACTGGAAGCAGACCTTTGACGCCTG
GCGGTACCGCATCTTCATGTACACACGCTACAACTCCAAGCTCAGCATGT
CGGAAACGACCGATCCGAAGAACTTCAAGCCCCTGACAGCTACCGACCAG
AAGGCGTATGCCATGTGGACCAGCCACAAGCACATAACGCCGCAGGACTA
CGAAAAAATGGACATGTTCGTGCCGCTGGACGAGACCACCACGGCAACGA
ACACCTACGACTACGCAAGCTTTCTAGACCAT
BO08133.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:51:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42676-RC | 1230 | CG42676-PC | 280..1227 | 17..964 | 4740 | 100 | Plus |
| CG42676-RF | 1284 | CG42676-PF | 1001..1118 | 675..792 | 185 | 77.1 | Plus |
| CG42676-RD | 1284 | CG42676-PD | 1001..1118 | 675..792 | 185 | 77.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:51:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42676-RE | 1577 | CG42676-RE | 549..1496 | 17..964 | 4740 | 100 | Plus |
| CG42676-RC | 1411 | CG42676-RC | 383..1330 | 17..964 | 4740 | 100 | Plus |
| CG42676-RF | 1668 | CG42676-RF | 1104..1221 | 675..792 | 185 | 77.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:50:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1803821..1804355 | 17..551 | 2675 | 100 | Plus |
| 3L | 28110227 | 3L | 1804417..1804829 | 552..964 | 2065 | 100 | Plus |
| 3L | 28110227 | 3L | 1806356..1806473 | 675..792 | 185 | 77.1 | Plus |
Blast to na_te.dros performed 2014-11-28 00:51:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2781..2849 | 386..454 | 174 | 72.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6811..6856 | 391..436 | 158 | 82.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6819 | 391..453 | 153 | 71.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6785 | 391..440 | 151 | 78 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2305..2383 | 393..470 | 149 | 67.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6778..6823 | 391..436 | 149 | 80.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1506..1565 | 374..436 | 137 | 71.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1110..1149 | 396..435 | 137 | 82.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6790..6865 | 391..465 | 134 | 65.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1541..1586 | 391..436 | 131 | 76.1 | Plus |
| invader4 | 3105 | invader4 INVADER4 3105bp | 81..135 | 112..58 | 131 | 70.9 | Minus |
| invader4 | 3105 | invader4 INVADER4 3105bp | 2840..2894 | 112..58 | 131 | 70.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2336..2380 | 391..435 | 126 | 75.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2351..2431 | 391..470 | 123 | 63 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6795 | 399..470 | 120 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2446..2518 | 399..470 | 119 | 64.4 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7943..8022 | 401..476 | 119 | 66.2 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9387..9466 | 401..476 | 119 | 66.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1072..1134 | 391..453 | 117 | 65.1 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 95..196 | 359..454 | 117 | 63.1 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9125..9226 | 359..454 | 117 | 63.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2765..2825 | 394..454 | 116 | 65.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2390..2470 | 391..470 | 114 | 61.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1117..1164 | 391..438 | 114 | 70.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2616..2659 | 392..435 | 112 | 72.7 | Plus |
BO08133.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:13:02 Download gff for
BO08133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12022-RA | 1..951 | 17..968 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:34:08 Download gff for
BO08133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12022-RA | 521..1476 | 10..968 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:00:47 Download gff for
BO08133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42676-RC | 383..1330 | 17..966 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:13:02 Download gff for
BO08133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12022-RA | 521..1476 | 10..968 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:27:40 Download gff for
BO08133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42676-RC | 383..1330 | 17..966 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:27:40 Download gff for
BO08133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1803821..1804355 | 17..551 | 100 | -> | Plus |
| 3L | 1804417..1804829 | 552..966 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:00:47 Download gff for
BO08133.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1803821..1804355 | 17..551 | 100 | -> | Plus |
| arm_3L | 1804417..1804829 | 552..966 | 99 | | Plus |
BO08133.pep Sequence
Translation from 16 to 982
> BO08133.pep
MLSYEPSCSMAVLKHHPHQHQHHVPLPQRSNESASHHAHEYVPDSQPTSP
ALRMSSEAVDSPLDQQGNNSVPERTDSSHKLRLGQAYSERTPESMTQAID
PMDIIPKSESESEVERLQRASRFLARQEQHQAQQQQHQQQLLPGQQIFPS
YTHPLPSMNAPNTSQQSPYTPGLMSRFRKRGERMSKDQKELYVKFFEDNP
CMLSNHRRHDGLTEPLWAKLAHMLNSVPQGAVKNVEDWKQTFDAWRYRIF
MYTRYNSKLSMSETTDPKNFKPLTATDQKAYAMWTSHKHITPQDYEKMDM
FVPLDETTTATNTYDYASFLDH
BO08133.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:27:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42676-PC | 409 | CG42676-PC | 94..409 | 1..316 | 1699 | 100 | Plus |
| CG42676-PF | 427 | CG42676-PF | 144..422 | 15..307 | 426 | 37 | Plus |
| CG42676-PD | 427 | CG13923-PB | 144..422 | 15..307 | 426 | 37 | Plus |
