Clone BO08137 Report

Search the DGRC for BO08137

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:81
Well:37
Vector:pDNR-Dual
Associated Gene/TranscriptCG15892-RA
Protein status:BO08137.pep: validated full length
Sequenced Size:925

Clone Sequence Records

BO08137.3prime Sequence

886 bp (845 high quality bases) assembled on 2006-01-06

> BO08137.3prime
ATGGTCTAGAAAGCTTGCGTCGCAGTCATAGCGGGTGCACTTCTCAAAGG
CTCCAAGACCCTGCGGCTGGGGCTTCTTGCGACGGCGCTCGTACAGCAGC
TTCTTCTCGGCGGCGCACATGAGCCGACGCTTGATGTGATTGTCCATCTC
GAAGTCCAAGTCGGCCGGCTTGGCCAGCTCGTTGGGATCCCTTGTGGCTG
CCGAGTCCAGCGCCTTAATGATCAAACTGAGCAGCGCGTGCGCGAGGCGA
TGGCACACATCGTACTCGATGGCATCCTGGCTGGTGTAGTAGATGGCCGA
CTGTGAGGTGGGCTGCACACCAATGGCCAACAGGATGTTGCAGAAGATGC
CGCGCTGCATGCGCGCATACGGATCCACCAGCTGCGGCGGAATGCGCATC
GTTGTGGCCAGATGGGAAATGAATTTGGCGAACTTCTTGATGAGCACGTT
CAGGTACTGGGTGCGGCACTGGCGCTCCAGCTTGGTCAGCATGTTGTAGT
ACAGTTCCTGCTTGCGCTTCAGGAAATCCTCCTTCTTTCGCTCCTTGGTC
TTGTTGCTCTTAAGGATCTGCTCCAGCTGTTCCGTGGTAATGGCTTTGTA
TTTGCCCAGCATGCGCTTGATCCGCTTGGCCCGCAGCTTCGGATCGTATA
CATCCTTGAACTGCTCGTAGTTGTCGATGAGCGTGTGCAACTTGGGCTTG
GACAGGGCCACGTCGTAGGGCTTTACCTTGGGCGGCAGTGTCGGCTGGTA
GGCCATGCGCCGCACATACAACTCCAGCTTGTCCAGTTCCTCCTCCCGCC
GCTTCTTTACGTTCTCCTCTGCGCACACATCCGGATCCTCCTCCTCGGGC
AGCGACTCCGTCGACGTGGGCATCGGCTCATCCAAT

BO08137.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:18:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG15892-PA 894 CG15892-RA 27..891 883..19 4325 100 Minus
CG15892-PB 894 CG15892-RB 27..891 883..19 4325 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:06:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG15892-RA 1173 CG15892-RA 232..1096 883..19 4325 100 Minus
CG15896-RB 2809 CG15896-RB 1815..2376 19..580 2810 100 Plus
CG15896-RB 2809 CG15896-RB 2442..2744 581..883 1515 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 07:06:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6293183..6293744 19..580 2810 100 Plus
X 23542271 X 6293810..6294112 581..883 1515 100 Plus
Blast to na_te.dros performed on 2015-02-13 07:06:02 has no hits.

BO08137.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:38:59 Download gff for BO08137.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15892-PA 23..894 18..886 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:29:49 Download gff for BO08137.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15892-PB 23..894 18..886 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 20:10:43 Download gff for BO08137.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15892-RA 228..1096 19..886 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 09:22:57 Download gff for BO08137.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15892-RA 228..1096 19..886 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 09:22:57 Download gff for BO08137.3prime
Subject Subject Range Query Range Percent Splice Strand
X 6293183..6293744 19..580 100 <- Plus
X 6293810..6294116 581..886 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 20:10:43 Download gff for BO08137.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6187216..6187777 19..580 100 <- Plus
arm_X 6187843..6188149 581..886 99   Plus

BO08137.5prime Sequence

818 bp (750 high quality bases) assembled on 2006-01-06

> BO08137.5prime
GAAGTTATCAGTCGACATGGCCAGCTCCAATGTCTCGGATTGGGATGAGC
CGATGCCCACGTCGACGGAGTCGCTGCCCGAGGAGGAGGATCCGGATGTG
TGCGCAGAGGAGAACGTAAAGAAGCGGCGGGAGGAGGAACTGGACAAGCT
GGAGTTGTATGTGCGGCGCATGGCCTACCAGCCGACACTGCCGCCCAAGG
TAAAGCCCTACGACGTGGCCCTGTCCAAGCCCAAGTTGCACACGCTCATC
GACAACTACGAGCAGTTCAAGGATGTATACGATCCGAAGCTGCGGGCCAA
GCGGATCAAGCGCATGCTGGGCAAATACAAAGCCATTACCACGGAACAGC
TGGAGCAGATCCTTAAGAGCAACAAGACCAAGGAGCGAAAGAAGGAGGAT
TTCCTGAAGCGCAAGCAGGAACTGTACTACAACATGCTGACCAAGCTGGA
GCGCCAGTGCCGCACCCAGTACCTGAACGTGCTCATCAAGAAGTTCGCCA
AATTCATTTCCCATCTGGCCACAACGATGCGCATTCCGCCGCAGCTGGTG
GATCCGTATGCGCGCATGCAGCGCGGCATCTTCTGCAACATCCTGTTGGC
CATTGGTGTGCAGCCCACCTCACAGTCGGCCATCTACTACACCAGCCAGG
ATGCCATCGAGTACGATGTGTGCCATCGCCTCGCGCACGCGCTGCTCAGT
TTGATCATTAAGGCGCTGGACTCGGCAGCCACAAGGGATCCCAACGAGCT
GGCCAAGCCGGCCGACTTGGACTTCGAGATGGACAATCACATCAAGCGTC
GGCTCATGTGCGCCGCCG

BO08137.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:18:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG15892-PA 894 CG15892-RA 1..802 17..818 4010 100 Plus
CG15892-PB 894 CG15892-RB 1..802 17..818 4010 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:38:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG15892-RA 1173 CG15892-RA 205..1007 16..818 4015 100 Plus
CG15896-RB 2809 CG15896-RB 1904..2376 818..346 2365 100 Minus
CG15896-RB 2809 CG15896-RB 2442..2771 345..16 1650 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:38:36
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6293272..6293744 818..346 2365 100 Minus
X 23542271 X 6293810..6294139 345..16 1650 100 Minus
Blast to na_te.dros performed on 2015-02-12 04:38:38 has no hits.

BO08137.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:39:00 Download gff for BO08137.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15892-PA 1..802 17..818 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:29:50 Download gff for BO08137.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15892-PB 1..802 17..818 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:38:47 Download gff for BO08137.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15892-RA 200..1007 8..818 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:09:52 Download gff for BO08137.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15892-RA 200..1007 8..818 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:09:52 Download gff for BO08137.5prime
Subject Subject Range Query Range Percent Splice Strand
X 6293272..6293744 346..818 100 <- Minus
X 6293810..6294144 8..345 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:38:47 Download gff for BO08137.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 6187305..6187777 346..818 100 <- Minus
arm_X 6187843..6188177 8..345 99   Minus

BO08137.complete Sequence

925 bp (925 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ631070

> BO08137.complete
GAAGTTATCAGTCGACATGGCCAGCTCCAATGTCTCGGATTGGGATGAGC
CGATGCCCACGTCGACGGAGTCGCTGCCCGAGGAGGAGGATCCGGATGTG
TGCGCAGAGGAGAACGTAAAGAAGCGGCGGGAGGAGGAACTGGACAAGCT
GGAGTTGTATGTGCGGCGCATGGCCTACCAGCCGACACTGCCGCCCAAGG
TAAAGCCCTACGACGTGGCCCTGTCCAAGCCCAAGTTGCACACGCTCATC
GACAACTACGAGCAGTTCAAGGATGTATACGATCCGAAGCTGCGGGCCAA
GCGGATCAAGCGCATGCTGGGCAAATACAAAGCCATTACCACGGAACAGC
TGGAGCAGATCCTTAAGAGCAACAAGACCAAGGAGCGAAAGAAGGAGGAT
TTCCTGAAGCGCAAGCAGGAACTGTACTACAACATGCTGACCAAGCTGGA
GCGCCAGTGCCGCACCCAGTACCTGAACGTGCTCATCAAGAAGTTCGCCA
AATTCATTTCCCATCTGGCCACAACGATGCGCATTCCGCCGCAGCTGGTG
GATCCGTATGCGCGCATGCAGCGCGGCATCTTCTGCAACATCCTGTTGGC
CATTGGTGTGCAGCCCACCTCACAGTCGGCCATCTACTACACCAGCCAGG
ATGCCATCGAGTACGATGTGTGCCATCGCCTCGCGCACGCGCTGCTCAGT
TTGATCATTAAGGCGCTGGACTCGGCAGCCACAAGGGATCCCAACGAGCT
GGCCAAGCCGGCCGACTTGGACTTCGAGATGGACAATCACATCAAGCGTC
GGCTCATGTGCGCCGCCGAGAAGAAGCTGCTGTACGAGCGCCGTCGCAAG
AAGCCCCAGCCGCAGGGTCTTGGAGCCTTTGAGAAGTGCACCCGCTATGA
CTGCGACGCAAGCTTTCTAGACCAT

BO08137.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:04:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG15892-RA 894 CG15892-PA 1..891 17..907 4455 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:04:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG15892-RA 1173 CG15892-RA 205..1096 16..907 4460 100 Plus
CG15896-RB 2809 CG15896-RB 1815..2376 907..346 2810 100 Minus
CG15896-RB 2809 CG15896-RB 2442..2771 345..16 1650 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:04:06
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6293183..6293744 907..346 2810 100 Minus
X 23542271 X 6293810..6294139 345..16 1650 100 Minus
Blast to na_te.dros performed on 2014-11-27 15:04:07 has no hits.

BO08137.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:12:53 Download gff for BO08137.complete
Subject Subject Range Query Range Percent Splice Strand
CG15892-RB 1..894 17..908 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:33:55 Download gff for BO08137.complete
Subject Subject Range Query Range Percent Splice Strand
CG15891-RA 972..1868 8..907 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:43:52 Download gff for BO08137.complete
Subject Subject Range Query Range Percent Splice Strand
CG15892-RA 206..1096 17..909 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:12:53 Download gff for BO08137.complete
Subject Subject Range Query Range Percent Splice Strand
CG15891-RA 972..1868 8..907 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:59:15 Download gff for BO08137.complete
Subject Subject Range Query Range Percent Splice Strand
CG15892-RA 206..1096 17..909 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:59:15 Download gff for BO08137.complete
Subject Subject Range Query Range Percent Splice Strand
X 6293810..6294138 17..345 100   Minus
X 6293181..6293744 346..909 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:43:52 Download gff for BO08137.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6187843..6188171 17..345 100   Minus
arm_X 6187214..6187777 346..909 99 <- Minus

BO08137.pep Sequence

Translation from 16 to 925

> BO08137.pep
MASSNVSDWDEPMPTSTESLPEEEDPDVCAEENVKKRREEELDKLELYVR
RMAYQPTLPPKVKPYDVALSKPKLHTLIDNYEQFKDVYDPKLRAKRIKRM
LGKYKAITTEQLEQILKSNKTKERKKEDFLKRKQELYYNMLTKLERQCRT
QYLNVLIKKFAKFISHLATTMRIPPQLVDPYARMQRGIFCNILLAIGVQP
TSQSAIYYTSQDAIEYDVCHRLAHALLSLIIKALDSAATRDPNELAKPAD
LDFEMDNHIKRRLMCAAEKKLLYERRRKKPQPQGLGAFEKCTRYDCDASF
LDH

BO08137.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:54:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG15892-PA 297 CG15892-PA 1..297 1..297 1547 100 Plus