Clone Sequence Records
BO08139.3prime Sequence
908 bp (868 high quality bases) assembled on 2006-01-06
> BO08139.3prime
ATGGTCTAGAAAGCTTGCTCTTATGCCTTTAAACAAACGGAGCACGGAGT
TTGGCTCTTTGGATATTTTCTGTTTGGTAAAAACGGTCCAGAAGCGAAGC
GTCTCATCTGCGCCGCCAGTCACTATGGACTCGTTATCCGGACTCACTGA
CAGGTGGAGTACCCGCTGTGTGTGCCCGGACAGCCTGGCCATCTGCTTCA
GCGAGGGATAGCGCCAGGCAATGACCTGTGGCTGCGCGTGTCCGTGGGTG
GTAACCAGCTCTCGGGAATCCCTGGCCCAGGCCAGGTTGCTGATCTGGGC
GCCGGTGTTGATGCACTTCACCAGCTTCCCGGTGAGGACGTTCCAAAAGC
GCAAGCAGCGATCGGCGGACCCACCGCCACTGGCCAGAAGACCGGACTTA
TGTGGCGACCAGCCCAGCGCCTTGACCACCGCCTTGTGCTCGTCGAAGGC
GTAAATGGGCTCCGGCCAATCGTCGGTCCAAACCAACAGGCGGTTGTCGC
TGCCACCGCTGGCCAAGTATCGATTGCTGGGCGACCACTGTAGGCCACAC
ACCTCTAGCTTGTGTCCGCGCAAGCAGCGGGTTATGTGCGTCGGCGGATT
GCGGATATCCCGCTGCAAAATTGAGCGGTCGCGGGAGCCACTGGCCAATC
GGTTGCCGCACCAAGCTAGCGCCGTTACACGCGCCGAGTGCTCTTCCAGT
CGGTTTATCTGCTTTTGGTTCTCGGCATCCCAAATGGTCACGTACCCGGA
CTGGGTGCCAATGGCCACCTGCCGGCCTTCACCGTGCCAGCTAACTGCTG
TAATCAGGTTATCCTCATTGTTGAAGTCGCATAGTCGCGTCACCTGACCA
CTGACGGCACTCCAGAGATAAACCGAGCACCCGAGACCACGGGCAGGGTG
TTTTTCGA
BO08139.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:18:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16783-PA | 1356 | fzr2-RA | 483..1353 | 889..19 | 4355 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:35:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzr2-RA | 1450 | CG16783-RA | 502..1392 | 908..19 | 4415 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 16:35:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23951148..23952038 | 908..19 | 4390 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-13 16:35:15 has no hits.
BO08139.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:39:03 Download gff for
BO08139.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-PA | 464..1356 | 16..907 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:29:54 Download gff for
BO08139.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16783-PA | 464..1356 | 16..907 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:14:00 Download gff for
BO08139.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 503..1392 | 19..907 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 19:22:24 Download gff for
BO08139.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 503..1392 | 19..907 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 19:22:24 Download gff for
BO08139.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23951149..23952038 | 19..907 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:14:00 Download gff for
BO08139.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19838672..19839561 | 19..907 | 99 | | Minus |
BO08139.5prime Sequence
902 bp (831 high quality bases) assembled on 2006-01-06
> BO08139.5prime
GAAGTTATCAGTCGACATGTTTCAATCAGAGTATCAGCAACGATTGCTTC
CGGGCGTCGCCGTCGGCAAAAAGGAGGACATCGATCTGCGCTGCATTCCC
ACACGAGCTGGTAACCACTGGAACCGGAACTTTGTCAATGCTCCGGGAGA
CTCCAATGTGTACGAGAGCTCTGTGTACTCATGCCTCTTGCGCAACGAGT
TCCTGGACGAGAACATCACTTCCTTGGAGAACTGCGAGCAGACCGCACAG
GTCCATGCCCAGACTGATGATTTTAGGGATCGGCATAACCGTATCTTTGG
TTTTGCCAGCGGTTCTTCGTCGCCAGTACGCACACCATTCGCCAACATCA
GCGAGAGCAGCCAGCGGCTGCTCAGCATCTTCAAGAGACCCATGCGCCGA
CTGCCACGTCGCCCGTACAAGATACTCGATGCGCCGGAGCTGCAAGACGA
CTTCTACCTGAACCTTATTGACTGGTCGTCGAAAAACACCCTGGCCGTTG
GTCTCGGGTGCTCGGTTTATCTCTGGAGTGCCGTCAGTGGTCAGGTGACG
CGACTATGCGACTTCAACAATGAGGATAACCTGATTACAGCAGTTAGCTG
GCACGGTGAAGGCCGGCAGGTGGCCATTGGCACCCAGTCCGGGTACGTGA
CCATTTGGGATGCCGAGAACCAAAAGCAGATAAACCGACTGGAAGAGCAC
TCGGCGCGTGTAACGGCGCTAGCTTGGTGCGGCAACCGATTGGCCAGTGG
CTCCCGCGACCGCTCAATTTTGCAGCGGGATATCCGCAATCCGCCGACGC
ACATAACCCGCTGCTTGCGCGGACACAAGCTAGAGGTGTGTGGCCTACAG
TGGTCGCCCAGCAATCGATACTTGGCCAGCGGTGGCAGCGACAACCGCCT
GT
BO08139.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:18:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16783-PA | 1356 | fzr2-RA | 1..886 | 17..902 | 4430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 15:46:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzr2-RA | 1450 | CG16783-RA | 40..925 | 17..902 | 4430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 15:46:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23950686..23951571 | 17..902 | 4430 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-12 15:46:18 has no hits.
BO08139.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:39:04 Download gff for
BO08139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-PA | 1..886 | 17..902 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:29:56 Download gff for
BO08139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16783-PA | 1..886 | 17..902 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-30 15:09:30 Download gff for
BO08139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 37..925 | 14..902 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 18:22:58 Download gff for
BO08139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 37..925 | 14..902 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 18:22:58 Download gff for
BO08139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23950683..23951571 | 14..902 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-30 15:09:30 Download gff for
BO08139.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19838206..19839094 | 14..902 | 99 | | Plus |
BO08139.complete Sequence
1387 bp (1387 high quality bases) assembled on 2005-12-21
GenBank Submission: FJ631071
> BO08139.complete
GAAGTTATCAGTCGACATGTTTCAATCAGAGTATCAGCAACGATTGCTTC
CGGGCGTCGCCGTCGGCAAAAAGGAGGACATCGATCTGCGCTGCATTCCC
ACACGAGCTGGTAACCACTGGAACCGGAACTTTGTCAATGCTCCGGGAGA
CTCCAATGTGTACGAGAGCTCTGTGTACTCATGCCTCTTGCGCAACGAGT
TCCTGGACGAGAACATCACTTCCTTGGAGAACTGCGAGCAGACCGCACAG
GTCCATGCCCAGACTGATGATTTTAGGGATCGGCATAACCGTATCTTTGG
TTTTGCCAGCGGTTCTTCGTCGCCAGTACGCACACCATTCGCCAACATCA
GCGAGAGCAGCCAGCGGCTGCTCAGCATCTTCAAGAGACCCATGCGCCGA
CTGCCACGTCGCCCGTACAAGATACTCGATGCGCCGGAGCTGCAAGACGA
CTTCTACCTGAACCTTATTGACTGGTCGTCGAAAAACACCCTGGCCGTTG
GTCTCGGGTGCTCGGTTTATCTCTGGAGTGCCGTCAGTGGTCAGGTGACG
CGACTATGCGACTTCAACAATGAGGATAACCTGATTACAGCAGTTAGCTG
GCACGGTGAAGGCCGGCAGGTGGCCATTGGCACCCAGTCCGGGTACGTGA
CCATTTGGGATGCCGAGAACCAAAAGCAGATAAACCGACTGGAAGAGCAC
TCGGCGCGTGTAACGGCGCTAGCTTGGTGCGGCAACCGATTGGCCAGTGG
CTCCCGCGACCGCTCAATTTTGCAGCGGGATATCCGCAATCCGCCGACGC
ACATAACCCGCTGCTTGCGCGGACACAAGCTAGAGGTGTGTGGCCTACAG
TGGTCGCCCAGCAATCGATACTTGGCCAGCGGTGGCAGCGACAACCGCCT
GTTGGTTTGGACCGACGATTGGCCGGAGCCCATTTACGCCTTCGACGAGC
ACAAGGCGGTGGTCAAGGCGCTGGGCTGGTCGCCACATAAGTCCGGTCTT
CTGGCCAGTGGCGGTGGGTCCGCCGATCGCTGCTTGCGCTTTTGGAACGT
CCTCACCGGGAAGCTGGTGAAGTGCATCAACACCGGCGCCCAGATCAGCA
ACCTGGCCTGGGCCAGGGATTCCCGAGAGCTGGTTACCACCCACGGACAC
GCGCAGCCACAGGTCATTGCCTGGCGCTATCCCTCGCTGAAGCAGATGGC
CAGGCTGTCCGGGCACACACAGCGGGTACTCCACCTGTCAGTGAGTCCGG
ATAACGAGTCCATAGTGACTGGCGGCGCAGATGAGACGCTTCGCTTCTGG
ACCGTTTTTACCAAACAGAAAATATCCAAAGAGCCAAACTCCGTGCTCCG
TTTGTTTAAAGGCATAAGAGCAAGCTTTCTAGACCAT
BO08139.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:31:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzr2-RA | 1356 | CG16783-PA | 1..1353 | 17..1369 | 6765 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:31:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzr2-RA | 1450 | CG16783-RA | 40..1392 | 17..1369 | 6765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:31:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23950686..23952038 | 17..1369 | 6765 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:31:53 has no hits.
BO08139.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:12:54 Download gff for
BO08139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 1..1356 | 17..1372 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:33:57 Download gff for
BO08139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 178..1533 | 14..1369 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:56:51 Download gff for
BO08139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 46..1392 | 23..1371 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:12:54 Download gff for
BO08139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 178..1533 | 14..1369 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:20:37 Download gff for
BO08139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzr2-RA | 46..1392 | 23..1371 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:20:37 Download gff for
BO08139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23950692..23952038 | 23..1371 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:56:51 Download gff for
BO08139.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19838215..19839561 | 23..1371 | 99 | | Plus |
BO08139.pep Sequence
Translation from 16 to 1387
> BO08139.pep
MFQSEYQQRLLPGVAVGKKEDIDLRCIPTRAGNHWNRNFVNAPGDSNVYE
SSVYSCLLRNEFLDENITSLENCEQTAQVHAQTDDFRDRHNRIFGFASGS
SSPVRTPFANISESSQRLLSIFKRPMRRLPRRPYKILDAPELQDDFYLNL
IDWSSKNTLAVGLGCSVYLWSAVSGQVTRLCDFNNEDNLITAVSWHGEGR
QVAIGTQSGYVTIWDAENQKQINRLEEHSARVTALAWCGNRLASGSRDRS
ILQRDIRNPPTHITRCLRGHKLEVCGLQWSPSNRYLASGGSDNRLLVWTD
DWPEPIYAFDEHKAVVKALGWSPHKSGLLASGGGSADRCLRFWNVLTGKL
VKCINTGAQISNLAWARDSRELVTTHGHAQPQVIAWRYPSLKQMARLSGH
TQRVLHLSVSPDNESIVTGGADETLRFWTVFTKQKISKEPNSVLRLFKGI
RASFLDH
BO08139.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:54:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzr2-PA | 451 | CG16783-PA | 1..451 | 1..451 | 2406 | 100 | Plus |
| rap-PA | 478 | CG3000-PA | 1..478 | 1..451 | 1184 | 49.2 | Plus |
| rap-PB | 478 | CG3000-PB | 1..478 | 1..451 | 1184 | 49.2 | Plus |
| fzy-PA | 526 | CG4274-PA | 188..508 | 123..439 | 733 | 42.4 | Plus |
| ago-PA | 1326 | CG15010-PA | 927..1267 | 64..432 | 199 | 23.3 | Plus |
