Clone BO08150 Report

Search the DGRC for BO08150

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:81
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptCG9427-RA
Protein status:BO08150.pep: validated full length
Sequenced Size:673

Clone Sequence Records

BO08150.3prime Sequence

671 bp (670 high quality bases) assembled on 2006-01-06

> BO08150.3prime
ATGGTCTAGAAAGCTTGCCTGGCAGATTGTGCTGCTGCTGGGCAGCAAGT
TTTGTTGACGCAACATATAACAAACCGTGCCGCGGAAATCGCGCAGCGAA
TGGTCCTGCAGCTGCTGATCGAAGACGCCATTGTAGACGATGGTGGGAAT
GAAGCTCGGGCTGTACTGTTTGGTCACCAGCTCCGCCTGCAGCTGCAATT
TGGTGCCCGTCTCGCTGGACAGGCAGTGGACCACATCGGTGAGCAGGCCT
GCCTCATTGGCACACTGATCAATGCGGGAATAATCCGGAGCTAGCATCTG
GCACACCACGAATTTAACCTGCGCCGCCTGGTTTGCGGTGCTGTTGATGA
CGCAACTCTGGAGGCGATTGCCCTTGCACTCAGCCGGTCCGTGCTGGCAG
TGGAAGATGGCACCATTGCGCTCCGACTGCGATTTTCCGAAGGGCACTAA
GAGTATATCAATGTAGTCCCCGAACTCCTCGTAAACGGGTCCTAGCTGAT
GCATGAAGTTCCTGCTGTCCGGGCACAAGGACTCGTAAAGGAGGGTGATG
TGCAGCTTGTTGGACTGGCGCTTCTCCCGTGGCTTCTCCTCGAGCTTCGC
CCATCCGAGGGACAGAACTAGAAGCAGAAGGCTTGCGGTGGACGCCAACT
TCGTCATGTCGACTGATAACT

BO08150.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:18:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG9427-PA 642 CG9427-RA 1..639 657..19 3170 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:36:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG9427-RA 847 CG9427-RA 141..779 657..19 3180 99.8 Minus
CG9427-RB 719 CG9427-RB 113..651 557..19 2695 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:36:27
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9625669..9625961 265..557 1465 100 Plus
3R 32079331 3R 9625425..9625567 125..267 715 100 Plus
3R 32079331 3R 9625225..9625332 19..126 540 100 Plus
3R 32079331 3R 9626235..9626336 556..657 495 99 Plus
Blast to na_te.dros performed on 2015-02-13 13:36:28 has no hits.

BO08150.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:39:25 Download gff for BO08150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9427-PA 1..642 18..657 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:30:23 Download gff for BO08150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9427-PA 1..642 18..657 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:10:34 Download gff for BO08150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9427-RA 134..779 19..666 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:58:28 Download gff for BO08150.3prime
Subject Subject Range Query Range Percent Splice Strand
CG9427-RA 134..779 19..666 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 15:58:28 Download gff for BO08150.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 9625669..9625959 265..555 100 <- Plus
3R 9626235..9626343 556..666 95   Plus
3R 9625225..9625332 19..126 100 <- Plus
3R 9625427..9625564 127..264 100 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:10:34 Download gff for BO08150.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5450947..5451054 19..126 100 <- Plus
arm_3R 5451149..5451286 127..264 100 <- Plus
arm_3R 5451391..5451681 265..555 100 <- Plus
arm_3R 5451957..5452065 556..666 95   Plus

BO08150.5prime Sequence

671 bp (670 high quality bases) assembled on 2006-01-06

> BO08150.5prime
GAAGTTATCAGTCGACATGACGAAGTTGGCGTCCACCGCAAGCCTTCTGC
TTCTCGTTCTGTCCCTCGGATGGGCGAAGCTCGAGGAGAAGCCACGGGAG
AAGCGCCAGTCCAACAAGCTGCACATCACCCTCCTTTACGAGTCCTTGTG
CCCGGACAGCAGGAACTTCATGCATCAGCTAGGACCCGTTTACGAGGAGT
TCGGGGACTACATTGATATACTCTTAGTGCCCTTCGGAAAATCGCAGTCG
GAGCGCAATGGTGCCATCTTCCACTGCCAGCACGGACCGGCTGAGTGCAA
GGGCAATCGCCTCCAGAGTTGCGTCATCAACAGCACCGCAAACCAGGCGG
CGCAGGTTAAATTCGTGGTGTGCCAGATGCTAGCTCCGGATTATTCCCGC
ATTGATCAGTGTGCCAATGAGGCAGGCCTGCTCACCGATGTGGTCCACTG
CCTGTCCAGCGAGACGGGCACCAAATTGCAGCTGCAGGCGGAGCTGGTGA
CCAAACAGTACAGCCCGAGCTTCATTCCCACCATCGTCTACAATGGCGTC
TTCGATCAGCAGCTGCAGGACCATTCGCTGCGCGATTTCCGCGGCACGGT
TTGTTATATGTTGCGTCAACAAAACTTGCTGCCCAGCAGCAGCACAATCT
GCCAGGCAAGCTTTCTAGACC

BO08150.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:18:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG9427-PA 642 CG9427-RA 1..639 17..655 3195 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-12 04:39:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG9427-RA 847 CG9427-RA 141..779 17..655 3195 100 Plus
CG9427-RB 719 CG9427-RB 113..651 117..655 2695 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-12 04:39:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9625669..9625961 409..117 1465 100 Minus
3R 32079331 3R 9625425..9625567 549..407 715 100 Minus
3R 32079331 3R 9625225..9625332 655..548 540 100 Minus
3R 32079331 3R 9626235..9626336 118..17 510 100 Minus
Blast to na_te.dros performed on 2015-02-12 04:39:12 has no hits.

BO08150.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:39:26 Download gff for BO08150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9427-PA 1..642 17..656 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:30:25 Download gff for BO08150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9427-PA 1..642 17..656 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-29 05:38:59 Download gff for BO08150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9427-RA 134..779 8..655 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 07:11:41 Download gff for BO08150.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9427-RA 134..779 8..655 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 07:11:41 Download gff for BO08150.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 9625225..9625332 548..655 100 <- Minus
3R 9625427..9625564 410..547 100 <- Minus
3R 9625669..9625959 119..409 100 <- Minus
3R 9626235..9626343 8..118 96   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-29 05:38:59 Download gff for BO08150.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5450947..5451054 548..655 100 <- Minus
arm_3R 5451149..5451286 410..547 100 <- Minus
arm_3R 5451391..5451681 119..409 100 <- Minus
arm_3R 5451957..5452065 8..118 96   Minus

BO08150.complete Sequence

673 bp (673 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ631078

> BO08150.complete
GAAGTTATCAGTCGACATGACGAAGTTGGCGTCCACCGCAAGCCTTCTGC
TTCTCGTTCTGTCCCTCGGATGGGCGAAGCTCGAGGAGAAGCCACGGGAG
AAGCGCCAGTCCAACAAGCTGCACATCACCCTCCTTTACGAGTCCTTGTG
CCCGGACAGCAGGAACTTCATGCATCAGCTAGGACCCGTTTACGAGGAGT
TCGGGGACTACATTGATATACTCTTAGTGCCCTTCGGAAAATCGCAGTCG
GAGCGCAATGGTGCCATCTTCCACTGCCAGCACGGACCGGCTGAGTGCAA
GGGCAATCGCCTCCAGAGTTGCGTCATCAACAGCACCGCAAACCAGGCGG
CGCAGGTTAAATTCGTGGTGTGCCAGATGCTAGCTCCGGATTATTCCCGC
ATTGATCAGTGTGCCAATGAGGCAGGCCTGCTCACCGATGTGGTCCACTG
CCTGTCCAGCGAGACGGGCACCAAATTGCAGCTGCAGGCGGAGCTGGTGA
CCAAACAGTACAGCCCGAGCTTCATTCCCACCATCGTCTACAATGGCGTC
TTCGATCAGCAGCTGCAGGACCATTCGCTGCGCGATTTCCGCGGCACGGT
TTGTTATATGTTGCGTCAACAAAACTTGCTGCCCAGCAGCAGCACAATCT
GCCAGGCAAGCTTTCTAGACCAT

BO08150.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:33:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG9427-RA 642 CG9427-PA 1..639 17..655 3195 100 Plus
CG9427-RB 639 CG9427-PB 98..636 117..655 2695 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:33:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG9427-RA 847 CG9427-RA 141..779 17..655 3195 100 Plus
CG9427-RB 719 CG9427-RB 113..651 117..655 2695 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:33:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9625669..9625961 409..117 1465 100 Minus
3R 32079331 3R 9625425..9625567 549..407 715 100 Minus
3R 32079331 3R 9625225..9625332 655..548 540 100 Minus
3R 32079331 3R 9626235..9626336 118..17 510 100 Minus
Blast to na_te.dros performed on 2014-11-27 08:33:22 has no hits.

BO08150.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:12:43 Download gff for BO08150.complete
Subject Subject Range Query Range Percent Splice Strand
CG9427-RA 1..642 17..656 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:33:48 Download gff for BO08150.complete
Subject Subject Range Query Range Percent Splice Strand
CG9427-RA 123..768 8..655 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:00:11 Download gff for BO08150.complete
Subject Subject Range Query Range Percent Splice Strand
CG9427-RA 141..779 17..657 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:12:44 Download gff for BO08150.complete
Subject Subject Range Query Range Percent Splice Strand
CG9427-RA 123..768 8..655 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:21:52 Download gff for BO08150.complete
Subject Subject Range Query Range Percent Splice Strand
CG9427-RA 141..779 17..657 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:21:52 Download gff for BO08150.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9625223..9625332 548..657 98 <- Minus
3R 9625427..9625564 410..547 100 <- Minus
3R 9625669..9625959 119..409 100 <- Minus
3R 9626235..9626336 17..118 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:00:11 Download gff for BO08150.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5451149..5451286 410..547 100 <- Minus
arm_3R 5450945..5451054 548..657 98 <- Minus
arm_3R 5451391..5451681 119..409 100 <- Minus
arm_3R 5451957..5452058 17..118 100   Minus

BO08150.pep Sequence

Translation from 16 to 673

> BO08150.pep
MTKLASTASLLLLVLSLGWAKLEEKPREKRQSNKLHITLLYESLCPDSRN
FMHQLGPVYEEFGDYIDILLVPFGKSQSERNGAIFHCQHGPAECKGNRLQ
SCVINSTANQAAQVKFVVCQMLAPDYSRIDQCANEAGLLTDVVHCLSSET
GTKLQLQAELVTKQYSPSFIPTIVYNGVFDQQLQDHSLRDFRGTVCYMLR
QQNLLPSSSTICQASFLDH

BO08150.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:54:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG9427-PA 213 CG9427-PA 1..213 1..213 1113 100 Plus
CG9427-PB 212 CG9427-PB 22..212 23..213 956 95.3 Plus
GILT1-PA 250 CG9796-PA 24..208 34..196 212 33.5 Plus
CG41378-PD 205 CG41378-PD 1..190 13..196 195 30.1 Plus
CG41378-PC 196 CG41378-PC 13..181 34..196 194 31.4 Plus