Clone BO08159 Report

Search the DGRC for BO08159

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:81
Well:59
Vector:pDNR-Dual
Associated Gene/TranscriptCG7720-RA
Protein status:BO08159.pep: validated full length
Sequenced Size:2077

Clone Sequence Records

BO08159.3prime Sequence

954 bp (805 high quality bases) assembled on 2006-01-06

> BO08159.3prime
ATGGTCTAGAAAGCTTGCGAGCGCAGATCGCCCGGCCAGTTGGCGATACA
CTCCCGTTTCGCCCTCGCCCGGCACAATGTCCAATTGGATCCTACTGCTG
TCGCATATCGACTGCTGATCCCCTGCTGATCCCGTTCCCTCGGAGGTGGT
GAATACCACGGCGATGGGACTGCTCTTCTCCTTGTCCTCCGGCGAGGACT
CGTAGCCGTGATTCACCTTCTCCGCCTTGCATGTGGTTGTCGTGGCCGAG
GAGTCACTGCTGCTCCGCCCATTCAGTCCGGACTCCTCCTCGTGCTTCAC
GTAGTACGGCTTTCGGCCGGAGAAACGCTCGCACAGCCGAAAGATCAACG
GATGCAGCAGCTTGCCGTCGTAGGCGTCATCCGGATGCTGAGTCAGCAAG
CTGATCACTGTGCCAATGATCACGGTCAGTGCCGTGCCAATTAAACTGTA
GTACATGAAGCTGATCGAGTAGAAGGTCTCCAGTCCGGATCTTTCAGGTG
CAATTGTGGGCTGTGTGGGCACAAAGCTCTGGTTGAAACCATCAATAGGC
GTGTGCGACAACAGCCAGGGCATCTGTCCCTGTTCCACGATGGGCTTGCC
AATGGACTGCGCGAAGGTATCGTTGGTGCAGCCATCTGTGGAGGTGGGCA
GCAGGGGATTGTCCTTGGTAACGGTCATGCCACCGCCAATGATCCAAAGC
ACAAAGGCGCAGGCGGTGACCATGCCGGCGGAGGTGCCCTTCCAATTCGC
AATCGGAACCATCATGGCCAGGATGAAGCAACCCAACAAAGGACCCGATG
TGGCCGAGAACACCAGCAGCGAGGACTCAATAACGCCCGCCAGCAGACCA
ACTCCAAAGGCCACGCCCATAATAATCAGTCCACAGACGACAGTGATCGA
CTTCAGAATTCGTAGCTGCTGTTTGTCGGAGAGTCCCTTGAATTTCGGCA
CTGT

BO08159.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:18:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG7720-PB 2046 CG7720-RB 1112..2043 950..19 4660 100 Minus
CG7720-PA 2046 CG7720-RA 1112..2043 950..19 4660 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:35:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG7720-RF 2471 CG7720-RF 1305..2236 950..19 4660 100 Minus
CG7720-RE 2607 CG7720-RE 1441..2372 950..19 4660 100 Minus
CG7720-RD 2758 CG7720-RD 1592..2523 950..19 4660 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:35:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18759471..18759944 19..492 2370 100 Plus
3R 32079331 3R 18760264..18760581 633..950 1590 100 Plus
3R 32079331 3R 18760056..18760198 491..633 715 100 Plus
Blast to na_te.dros performed on 2015-02-04 20:35:21 has no hits.

BO08159.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:39:43 Download gff for BO08159.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7720-PB 1107..2046 16..954 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:30:50 Download gff for BO08159.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7720-PA 1107..2046 16..954 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:27:46 Download gff for BO08159.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7720-RD 1587..2531 11..954 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:52:15 Download gff for BO08159.3prime
Subject Subject Range Query Range Percent Splice Strand
CG7720-RD 1587..2531 11..954 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:52:15 Download gff for BO08159.3prime
Subject Subject Range Query Range Percent Splice Strand
3R 18759463..18759942 11..490 99 <- Plus
3R 18760056..18760198 491..633 100 <- Plus
3R 18760265..18760586 634..954 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:27:46 Download gff for BO08159.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14585185..14585664 11..490 99 <- Plus
arm_3R 14585778..14585920 491..633 100 <- Plus
arm_3R 14585987..14586308 634..954 99   Plus

BO08159.5prime Sequence

955 bp (863 high quality bases) assembled on 2006-01-06

> BO08159.5prime
GAAGTTATCAGTCGACATGGCCAAGGACTTGAGCACTATGGGATGGGATT
ATCTGATGTTTGTACTGTTTATAGCCCTCACCGTTTTGGGCCCGTTGTGG
AAACGCATTTTTGGCAAAAAGAAGGAGCGCAGCAAGGCCGACTATGTTTT
TGCCACCGGCGGAGTTTCGATAGTGGCAGTCATGATTTCCATTGCCCGAG
GAACCTTGGGAGTGAGATCCGTGCTAGGCTATCCCAGTGAATTGTACTAC
CGCGGATCGGCCATGTGGGAGATCATCTACGGCATGATGAGCGCCTATCC
CATCGTTTGCTTCATGTTCGTGCCCGTGTACTTTAATCTGGGCATCACCT
CCGTCTATCAGTACATCGATCTCAGGTTCAAGAGCCGCACGGTGAGATGC
CTGGCATCGGCGACATATATCGTGCGGCAGATCTGCAACCTTGGCATCAC
CGTGTACACTCCCAGCGTGGCCCTCTCGACGGTGATTGGCATACCCTACT
GGGCCTCCATTACGGGCATGGCCGTCATTTGCATATTCTTCACCATTATG
GGCGGCCTGAAGGCGGCTATCAACGCGGACGTCATCCAGACAGTGACCAT
TCTGGTTGTCACTGTGGCGGTTTGTATCCAGGGAACTATCTCTACGGGCG
GCGTGAAGAAGGTTTACCAACTAAATCGGGACAATGGACGTCTCAACTTT
TGGAACTTCACGGGCGATATGACTGTCAGAGTGGATACCACATCGGCTTG
GCTGGGCCAACTGTTCATGTCCCTCTCCCAGATCGGCTGTCAGCAGAACT
TTATGCAGCGTTATGTCAGCCTCAAGTCGCTCAAGCAAGTGCGTCGAGTT
ATGCTGACCAATGTGCCTTTGGTCTTCTTCTTCTTTTTCATCTCCTGGAT
CTCTGGCATGGTCATCTATTCCACGTACATCAACTGCGATCCCTACGCCG
AGGGC

BO08159.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:18:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG7720-PB 2046 CG7720-RB 1..939 17..955 4670 99.8 Plus
CG7720-PA 2046 CG7720-RA 1..939 17..955 4670 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 13:37:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG7720-RF 2471 CG7720-RF 192..1132 15..955 4690 99.9 Plus
CG7720-RE 2607 CG7720-RE 328..1268 15..955 4690 99.9 Plus
CG7720-RD 2758 CG7720-RD 479..1419 15..955 4690 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 13:37:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18768871..18769084 228..15 1070 100 Minus
3R 32079331 3R 18761831..18762008 551..374 890 100 Minus
3R 32079331 3R 18760995..18761155 846..686 805 100 Minus
3R 32079331 3R 18768658..18768809 377..226 760 100 Minus
3R 32079331 3R 18761601..18761738 687..550 690 100 Minus
3R 32079331 3R 18760809..18760918 955..846 535 99.1 Minus
Blast to na_te.dros performed on 2015-02-13 13:37:01 has no hits.

BO08159.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:39:44 Download gff for BO08159.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7720-PB 1..939 17..955 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:30:51 Download gff for BO08159.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7720-PA 1..939 17..955 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-02 18:10:40 Download gff for BO08159.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7720-RD 469..1419 3..955 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:00:42 Download gff for BO08159.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7720-RD 469..1419 3..955 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:00:42 Download gff for BO08159.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 18761832..18762006 376..550 100 <- Minus
3R 18768660..18768807 228..375 100 <- Minus
3R 18768872..18769094 3..227 97   Minus
3R 18760809..18760917 847..955 99 <- Minus
3R 18760995..18761154 687..846 100 <- Minus
3R 18761602..18761737 551..686 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-02 18:10:40 Download gff for BO08159.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14594382..14594529 228..375 100 <- Minus
arm_3R 14586531..14586639 847..955 99 <- Minus
arm_3R 14586717..14586876 687..846 100 <- Minus
arm_3R 14587324..14587459 551..686 100 <- Minus
arm_3R 14587554..14587728 376..550 100 <- Minus
arm_3R 14594594..14594816 3..227 97   Minus

BO08159.complete Sequence

2077 bp (2077 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ631082

> BO08159.complete
GAAGTTATCAGTCGACATGGCCAAGGACTTGAGCACTATGGGATGGGATT
ATCTGATGTTTGTACTGTTTATAGCCCTCACCGTTTTGGGCCCGTTGTGG
AAACGCATTTTTGGCAAAAAGAAGGAGCGCAGCAAGGCCGACTATGTTTT
TGCCACCGGCGGAGTTTCGATAGTGGCAGTCATGATTTCCATTGCCCGAG
GAACCTTGGGAGTGAGATCCGTGCTAGGCTATCCCAGTGAATTGTACTAC
CGCGGATCGGCCATGTGGGAGATCATCTACGGCATGATGAGCGCCTATCC
CATCGTTTGCTTCATGTTCGTGCCCGTGTACTTTAATCTGGGCATCACCT
CCGTCTATCAGTACATCGATCTCAGGTTCAAGAGCCGCACGGTGAGATGC
CTGGCATCGGCGACATATATCGTGCGGCAGATCTGCAACCTTGGCATCAC
CGTGTACACTCCCAGCGTGGCCCTCTCGACGGTGATTGGCATACCCTACT
GGGCCTCCATTACGGGCATGGCCGTCATTTGCATATTCTTCACCATTATG
GGCGGCCTGAAGGCGGCTATCAACGCGGACGTCATCCAGACAGTGACCAT
TCTGGTTGTCACTGTGGCGGTTTGTATCCAGGGAACTATCTCTACGGGCG
GCGTGAAGAAGGTTTACCAACTAAATCGGGACAATGGACGTCTCAACTTT
TGGAACTTCACGGGCGATATGACTGTCAGAGTGGATACCACATCGGCTTG
GCTGGGCCAACTGTTCATGTCCCTCTCCCAGATCGGCTGTCAGCAGAACT
TTATGCAGCGTTATGTCAGCCTCAAGTCGCTCAAGCAAGTGCGTCGAGTT
ATGCTGACCAATGTGCCTTTGGTCTTCTTCTTCTTTTCCATCTCCTGGAT
CTCTGGCATGGTCATCTATTCCACGTACATCAACTGCGATCCCTACGCCG
AGGGCTACATTAAGAAACCCGATGAGATTCTGCCATTCTTTGTGGAGGAT
CAGCTCGGTTTTCTGCCCGGTTTCGTGGGCATTTTCATGGCCACTCTGTT
CAATGGCGCCCTTTGCATGATGGTGTCGAATCTGAATTCATTGGCAACGG
TTATTTGGGAGGACTTCATCTCACAGTTGCCGAAATTCAAGGGACTCTCC
GACAAACAGCAGCTACGAATTCTGAAGTCGATCACTGTCGTCTGTGGACT
GATTATTATGGGCGTGGCCTTTGGAGTTGGTCTGCTGGCGGGCGTTATTG
AGTCCTCGCTGCTGGTGTTCTCGGCCACATCGGGTCCTTTGTTGGGTTGC
TTCATCCTGGCCATGATGGTTCCGATTGCGAATTGGAAGGGCACCTCCGC
CGGCATGGTCACCGCCTGCGCCTTTGTGCTTTGGATCATTGGCGGTGGCA
TGACCGTTACCAAGGACAATCCCCTGCTGCCCACCTCCACAGATGGCTGC
ACCAACGATACCTTCGCGCAGTCCATTGGCAAGCCCATCGTGGAACAGGG
ACAGATGCCCTGGCTGTTGTCGCACACGCCTATTGATGGTTTCAACCAGA
GCTTTGTGCCCACACAGCCCACAATTGCACCTGAAAGATCCGGACTGGAG
ACCTTCTACTCGATCAGCTTCATGTACTACAGTTTAATTGGCACGGCACT
GACCGTGATCATTGGCACAGTGATCAGCTTGCTGACTCAGCATCCGGATG
ACGCCTACGACGGCAAGCTGCTGCATCCGTTGATCTTTCGGCTGTGCGAG
CGTTTCTCCGGCCGAAAGCCGTACTACGTGAAGCACGAGGAGGAGTCCGG
ACTGAATGGGCGGAGCAGCAGTGACTCCTCGGCCACGACAACCACATGCA
AGGCGGAGAAGGTGAATCACGGCTACGAGTCCTCGCCGGAGGACAAGGAG
AAGAGCAGTCCCATCGCCGTGGTATTCACCACCTCCGAGGGAACGGGATC
AGCAGGGGATCAGCAGTCGATATGCGACAGCAGTAGGATCCAATTGGACA
TTGTGCCGGGCGAGGGCGAAACGGGAGTGTATCGCCAACTGGCCGGGCGA
TCTGCGCTCGCAAGCTTTCTAGACCAT

BO08159.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:08:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG7720-RF 2046 CG7720-PF 1..2043 17..2059 10215 100 Plus
CG7720-RE 2046 CG7720-PE 1..2043 17..2059 10215 100 Plus
CG7720-RD 2046 CG7720-PD 1..2043 17..2059 10215 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:08:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG7720-RF 2471 CG7720-RF 192..2236 15..2059 10225 100 Plus
CG7720-RE 2607 CG7720-RE 328..2372 15..2059 10225 100 Plus
CG7720-RD 2758 CG7720-RD 479..2523 15..2059 10225 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:08:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18759471..18759944 2059..1586 2370 100 Minus
3R 32079331 3R 18760264..18760644 1445..1065 1905 100 Minus
3R 32079331 3R 18760699..18760918 1065..846 1100 100 Minus
3R 32079331 3R 18768871..18769084 228..15 1070 100 Minus
3R 32079331 3R 18761831..18762008 551..374 890 100 Minus
3R 32079331 3R 18760995..18761155 846..686 805 100 Minus
3R 32079331 3R 18768658..18768809 377..226 760 100 Minus
3R 32079331 3R 18760056..18760198 1587..1445 715 100 Minus
3R 32079331 3R 18761601..18761738 687..550 690 100 Minus
Blast to na_te.dros performed on 2014-11-27 10:08:12 has no hits.

BO08159.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:00:10 Download gff for BO08159.complete
Subject Subject Range Query Range Percent Splice Strand
CG7720-RA 1..2046 17..2062 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 07:32:15 Download gff for BO08159.complete
Subject Subject Range Query Range Percent Splice Strand
CG7720-RA 136..2198 3..2067 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:36:08 Download gff for BO08159.complete
Subject Subject Range Query Range Percent Splice Strand
CG7720-RD 481..2523 17..2061 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:00:10 Download gff for BO08159.complete
Subject Subject Range Query Range Percent Splice Strand
CG7720-RA 136..2198 3..2067 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:13:59 Download gff for BO08159.complete
Subject Subject Range Query Range Percent Splice Strand
CG7720-RD 481..2523 17..2061 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:13:59 Download gff for BO08159.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18760056..18760198 1445..1587 100 <- Minus
3R 18760699..18760917 847..1065 100 <- Minus
3R 18760995..18761154 687..846 100 <- Minus
3R 18761602..18761737 551..686 100 <- Minus
3R 18761832..18762006 376..550 100 <- Minus
3R 18768660..18768807 228..375 100 <- Minus
3R 18768872..18769082 17..227 100   Minus
3R 18760265..18760643 1066..1444 100 <- Minus
3R 18759468..18759942 1588..2061 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:36:08 Download gff for BO08159.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14594382..14594529 228..375 100 <- Minus
arm_3R 14594594..14594804 17..227 100   Minus
arm_3R 14585987..14586365 1066..1444 100 <- Minus
arm_3R 14586421..14586639 847..1065 100 <- Minus
arm_3R 14586717..14586876 687..846 100 <- Minus
arm_3R 14587324..14587459 551..686 100 <- Minus
arm_3R 14585190..14585664 1588..2061 99 <- Minus
arm_3R 14585778..14585920 1445..1587 100 <- Minus
arm_3R 14587554..14587728 376..550 100 <- Minus

BO08159.pep Sequence

Translation from 16 to 2077

> BO08159.pep
MAKDLSTMGWDYLMFVLFIALTVLGPLWKRIFGKKKERSKADYVFATGGV
SIVAVMISIARGTLGVRSVLGYPSELYYRGSAMWEIIYGMMSAYPIVCFM
FVPVYFNLGITSVYQYIDLRFKSRTVRCLASATYIVRQICNLGITVYTPS
VALSTVIGIPYWASITGMAVICIFFTIMGGLKAAINADVIQTVTILVVTV
AVCIQGTISTGGVKKVYQLNRDNGRLNFWNFTGDMTVRVDTTSAWLGQLF
MSLSQIGCQQNFMQRYVSLKSLKQVRRVMLTNVPLVFFFFSISWISGMVI
YSTYINCDPYAEGYIKKPDEILPFFVEDQLGFLPGFVGIFMATLFNGALC
MMVSNLNSLATVIWEDFISQLPKFKGLSDKQQLRILKSITVVCGLIIMGV
AFGVGLLAGVIESSLLVFSATSGPLLGCFILAMMVPIANWKGTSAGMVTA
CAFVLWIIGGGMTVTKDNPLLPTSTDGCTNDTFAQSIGKPIVEQGQMPWL
LSHTPIDGFNQSFVPTQPTIAPERSGLETFYSISFMYYSLIGTALTVIIG
TVISLLTQHPDDAYDGKLLHPLIFRLCERFSGRKPYYVKHEEESGLNGRS
SSDSSATTTTCKAEKVNHGYESSPEDKEKSSPIAVVFTTSEGTGSAGDQQ
SICDSSRIQLDIVPGEGETGVYRQLAGRSALASFLDH

BO08159.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:47:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG7720-PF 681 CG7720-PF 1..681 1..681 3522 100 Plus
CG7720-PE 681 CG7720-PE 1..681 1..681 3522 100 Plus
CG7720-PD 681 CG7720-PD 1..681 1..681 3522 100 Plus
CG7720-PC 681 CG7720-PC 1..681 1..681 3522 100 Plus
CG7720-PA 681 CG7720-PA 1..681 1..681 3522 100 Plus