Clone BO08180 Report

Search the DGRC for BO08180

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:81
Well:80
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO08180.pep: validated full length
Sequenced Size:928

Clone Sequence Records

BO08180.3prime Sequence

851 bp (800 high quality bases) assembled on 2006-01-06

> BO08180.3prime
ATGGTCTAGAAAGCTTGCATCATAATTTCTCCTTTTCTTTTTCTGTTCTT
GGGGATCAGTATCACTCTCCTCCAGTTCGCTCTTGTTGCGTCGCTTCTCA
TAAATGAGAATGATGATGCACAGAATCAGCACCTCAGCACAGATGCCCAG
GAAAGGCCACAAGGCGGCAAATTTGCCCTTAACACGCACAGTTGTGACGT
CGCTGGCAGGAGTGGTGGTGTTCCCACCGTAGACATTGGCCGCATTTCGT
CCAATGCATTTGTATTCGCCTCTGTCGTCCAATGTCACATTATCCAGTGT
CAGAATGGCGTTAGGAACACCATTATCGTCTGGTTTGAGAATGAAGCGAT
CTGTGGCATTTGTCAGCGTTACATTGGCAAAGGTCCATGTCAACTCTGGT
TTGGTACCCACAACGCTGCAGGTCACCGACATCTTTTCACCCTCCACAAC
GGCTGTATTTGAAGGCACTCGTACAACAACGCGGGCAATTACTTCGATTT
CCTTGGACACGCCGTCAAACTCGCAACTGTATTTGCCATCGTCGTTCGTA
TCCGTCTTATCGATGATGAACTTGTTCTCGTCTGCGATTAACTTAAAGCG
ACCTCTGAGAGAAGGTACATCCGTCACAGCGGTGCCGTTCTTTTTCCATA
TGAGCACGCCGCCCGGCGTACCGTCTTTCACGTTGCAGCTGAGAACGAGC
GGCGATCTGATGTCGTANAATTTCATTTGATGCTCGGCATTATCATAGTT
TGGCACCAGCTTATCCATCTTGACGGGCAAGAGCGTCTGGTGCTGCAGAT
GCACCTGATGCCCCTGGCCACCCATCAGCATGTGACCGCCAGCACCCAGC
A

BO08180.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:19:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG31605-PG 897 Bsg-RG 62..894 851..19 4146 99.8 Minus
CG31605-PD 798 Bsg-RD 73..795 765..43 3596 99.8 Minus
CG31605-PC 798 Bsg-RC 73..795 765..43 3596 99.8 Minus
CG31605-PE 798 Bsg-RE 73..795 765..43 3596 99.8 Minus
CG31605-PF 798 Bsg-RF 73..795 765..43 3596 99.8 Minus
CG31605-PH 798 Bsg-RH 73..795 765..43 3596 99.8 Minus
CG31605-PI 798 Bsg-RI 73..795 765..43 3596 99.8 Minus
CG31605-PB 798 Bsg-RB 73..795 765..43 3596 99.8 Minus
CG31605-PA 798 Bsg-RA 73..795 765..43 3596 99.8 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:08:23
Subject Length Description Subject Range Query Range Score Percent Strand
Bsg-RG 8453 CG31605-RG 1595..2427 851..19 4154 99.9 Minus
Bsg-RB 2744 CG31605-RB 445..1167 765..43 3604 99.9 Minus
Bsg-RH 3001 CG31605-RH 702..1424 765..43 3604 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:08:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8107237..8107448 378..167 1030 99.1 Minus
2L 23513712 2L 8106839..8107000 647..486 810 100 Minus
2L 23513712 2L 8107747..8107881 177..43 675 100 Minus
2L 23513712 2L 8105691..8105810 765..646 589 99.2 Minus
2L 23513712 2L 8107065..8107173 486..378 545 100 Minus
2L 23513712 2L 8103417..8103503 851..765 435 100 Minus
Blast to na_te.dros performed on 2015-02-11 22:08:21 has no hits.

BO08180.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:40:23 Download gff for BO08180.3prime
Subject Subject Range Query Range Percent Splice Strand
Bsg-PG 63..897 15..850 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:31:46 Download gff for BO08180.3prime
Subject Subject Range Query Range Percent Splice Strand
CG31605-PG 63..897 15..850 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:47:40 Download gff for BO08180.3prime
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1596..2434 11..850 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:44:59 Download gff for BO08180.3prime
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1596..2434 11..850 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:44:59 Download gff for BO08180.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 8107238..8107438 177..377 100 -> Minus
2L 8107748..8107880 44..176 100 -> Minus
2L 8103418..8103503 765..850 100 -> Minus
2L 8105692..8105809 647..764 99 -> Minus
2L 8106840..8107000 486..646 100 -> Minus
2L 8107066..8107173 378..485 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:47:40 Download gff for BO08180.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8103418..8103503 765..850 100 -> Minus
arm_2L 8105692..8105809 647..764 99 -> Minus
arm_2L 8106840..8107000 486..646 100 -> Minus
arm_2L 8107066..8107173 378..485 100 -> Minus
arm_2L 8107238..8107438 177..377 100 -> Minus
arm_2L 8107748..8107880 44..176 100 -> Minus

BO08180.5prime Sequence

926 bp (837 high quality bases) assembled on 2006-01-06

> BO08180.5prime
GAAGTTATCAGTCGACATGATGGGTGGCGGTGGTGGCGTTGCTGGTGCGG
GCTTTTCCGCGGGCGCCAGTGGCCCAATGCTGGGTGCTGGCGGTCACATG
CTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAGACGCTCTT
GCCCGTCAAGATGGATAAGCTGGTGCCAAACTATGATAATGCCGAGCATC
AAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGCTGCAACGTG
AAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAACGGCACCGC
TGTGACGGATGTACCTTCTCTCAGAGGTCGCTTTAAGTTAATCGCAGACG
AGAACAAGTTCATCATCGATAAGACGGATACGAACGACGATGGCAAATAC
AGTTGCGAGTTTGACGGCGTGTCCAAGGAAATCGAAGTAATTGCCCGCGT
TGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTGAAAAGATGT
CGGTGACCTGCAGCGTTGTGGGTACCAAACCAGAGTTGACATGGACCTTT
GCCAATGTAACGCTGACAAATGCCACAGATCGCTTCATTCTCAAACCAGA
CGATAATGGTGTTCCTAACGCCATTCTGACACTGGATAATGTGACATTGG
ACGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCCAATGTCTAC
GGTGGGAACACCACCACTCCTGCCAGCGACGTCACAACTGTGCGTGTTAA
GGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCATCTGTGCTGAGGTGC
TGATTCTGTGCATCATCATTCTCATTTATGAGAAGCGACGCAACAAGAGC
GAACTGGAGGAGAGTGATACTGATCCCCAAGAACAGAAAAAGAAAAGGAG
AAATTATGATGCAAGCTTTCTAGACC

BO08180.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:19:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG31605-PG 897 Bsg-RG 1..894 17..910 4470 100 Plus
CG31605-PD 798 Bsg-RD 73..795 164..886 3615 100 Plus
CG31605-PC 798 Bsg-RC 73..795 164..886 3615 100 Plus
CG31605-PE 798 Bsg-RE 73..795 164..886 3615 100 Plus
CG31605-PF 798 Bsg-RF 73..795 164..886 3615 100 Plus
CG31605-PH 798 Bsg-RH 73..795 164..886 3615 100 Plus
CG31605-PI 798 Bsg-RI 73..795 164..886 3615 100 Plus
CG31605-PB 798 Bsg-RB 73..795 164..886 3615 100 Plus
CG31605-PA 798 Bsg-RA 73..795 164..886 3615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:08:03
Subject Length Description Subject Range Query Range Score Percent Strand
Bsg-RG 8453 CG31605-RG 1533..2427 16..910 4475 100 Plus
Bsg-RB 2744 CG31605-RB 445..1167 164..886 3615 100 Plus
Bsg-RH 3001 CG31605-RH 702..1424 164..886 3615 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:07:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8107237..8107448 551..762 1030 99.1 Plus
2L 23513712 2L 8106839..8107000 282..443 810 100 Plus
2L 23513712 2L 8103355..8103503 16..164 745 100 Plus
2L 23513712 2L 8107747..8107881 752..886 675 100 Plus
2L 23513712 2L 8105691..8105810 164..283 600 100 Plus
2L 23513712 2L 8107065..8107173 443..551 545 100 Plus
Blast to na_te.dros performed on 2015-02-11 03:08:01 has no hits.

BO08180.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:40:24 Download gff for BO08180.5prime
Subject Subject Range Query Range Percent Splice Strand
Bsg-PG 1..897 17..914 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:31:47 Download gff for BO08180.5prime
Subject Subject Range Query Range Percent Splice Strand
CG31605-PG 1..897 17..914 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:24:47 Download gff for BO08180.5prime
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1528..2434 10..918 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:26:21 Download gff for BO08180.5prime
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1528..2434 10..918 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:26:21 Download gff for BO08180.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8103350..8103503 10..164 98 -> Plus
2L 8105692..8105809 165..282 100 -> Plus
2L 8106840..8107000 283..443 100 -> Plus
2L 8107066..8107173 444..551 100 -> Plus
2L 8107238..8107438 552..752 100 -> Plus
2L 8107748..8107880 753..885 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:24:47 Download gff for BO08180.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8106840..8107000 283..443 100 -> Plus
arm_2L 8107066..8107173 444..551 100 -> Plus
arm_2L 8103350..8103503 10..164 98 -> Plus
arm_2L 8105692..8105809 165..282 100 -> Plus
arm_2L 8107238..8107438 552..752 100 -> Plus
arm_2L 8107748..8107880 753..885 100 -> Plus

BO08180.complete Sequence

928 bp (928 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ631091

> BO08180.complete
GAAGTTATCAGTCGACATGATGGGTGGCGGTGGTGGCGTTGCTGGTGCGG
GCTTTTCCGCGGGCGCCAGTGGCCCAATGCTGGGTGCTGGCGGTCACATG
CTGATGGGTGGCCAGGGGCATCAGGTGCATCTGCAGCACCAGACGCTCTT
GCCCGTCAAGATGGATAAGCTGGTGCCAAACTATGATAATGCCGAGCATC
AAATGAAATTTTACGACATCAGATCGCCGCTCGTTCTCAGCTGCAACGTG
AAAGACGGTACGCCGGGCGGCGTGCTCATATGGAAAAAGAACGGCACCGC
TGTGACGGATGTACCTTCTCTCAGAGGTCGCTTTAAGTTAATCGCAGACG
AGAACAAGTTCATCATCGATAAGACGGATACGAACGACGATGGCAAATAC
AGTTGCGAGTTTGACGGCGTGTCCAAGGAAATCGAAGTAATTGCCCGCGT
TGTTGTACGAGTGCCTTCAAATACAGCCGTTGTGGAGGGTGAAAAGATGT
CGGTGACCTGCAGCGTTGTGGGTACCAAACCAGAGTTGACATGGACCTTT
GCCAATGTAACGCTGACAAATGCCACAGATCGCTTCATTCTCAAACCAGA
CGATAATGGTGTTCCTAACGCCATTCTGACACTGGATAATGTGACATTGG
ACGACAGAGGCGAATACAAATGCATTGGACGAAATGCGGCCAATGTCTAC
GGTGGGAACACCACCACTCCTGCCAGCGACGTCACAACTGTGCGTGTTAA
GGGCAAATTTGCCGCCTTGTGGCCTTTCCTGGGCATCTGTGCTGAGGTGC
TGATTCTGTGCATCATCATTCTCATTTATGAGAAGCGACGCAACAAGAGC
GAACTGGAGGAGAGTGATACTGATCCCCAAGAACAGAAAAAGAAAAGGAG
AAATTATGATGCAAGCTTTCTAGACCAT

BO08180.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:52:03
Subject Length Description Subject Range Query Range Score Percent Strand
Bsg-RG 1947 CG31605-PG 1050..1944 16..910 4475 100 Plus
Bsg-RB 798 CG31605-PB 73..795 164..886 3615 100 Plus
Bsg-RH 798 CG31605-PH 73..795 164..886 3615 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:04
Subject Length Description Subject Range Query Range Score Percent Strand
Bsg-RG 8453 CG31605-RG 1533..2427 16..910 4475 100 Plus
Bsg-RB 2744 CG31605-RB 445..1167 164..886 3615 100 Plus
Bsg-RH 3001 CG31605-RH 702..1424 164..886 3615 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:01
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8107237..8107448 551..762 1030 99.1 Plus
2L 23513712 2L 8106839..8107000 282..443 810 100 Plus
2L 23513712 2L 8103355..8103503 16..164 745 100 Plus
2L 23513712 2L 8107747..8107881 752..886 675 100 Plus
2L 23513712 2L 8105691..8105810 164..283 600 100 Plus
2L 23513712 2L 8107065..8107173 443..551 545 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:52:02 has no hits.

BO08180.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:12:25 Download gff for BO08180.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1045..1947 10..914 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:33:24 Download gff for BO08180.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1463..2369 10..918 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:36:43 Download gff for BO08180.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1534..2427 17..912 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:12:26 Download gff for BO08180.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1463..2369 10..918 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:11:55 Download gff for BO08180.complete
Subject Subject Range Query Range Percent Splice Strand
Bsg-RG 1534..2427 17..912 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:11:55 Download gff for BO08180.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8103356..8103503 17..164 100 -> Plus
2L 8105692..8105809 165..282 100 -> Plus
2L 8106840..8107000 283..443 100 -> Plus
2L 8107066..8107173 444..551 100 -> Plus
2L 8107238..8107438 552..752 100 -> Plus
2L 8107748..8107880 753..885 100 -> Plus
2L 8110481..8110505 886..912 92   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:36:43 Download gff for BO08180.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8103356..8103503 17..164 100 -> Plus
arm_2L 8105692..8105809 165..282 100 -> Plus
arm_2L 8106840..8107000 283..443 100 -> Plus
arm_2L 8107066..8107173 444..551 100 -> Plus
arm_2L 8107238..8107438 552..752 100 -> Plus
arm_2L 8107748..8107880 753..885 100 -> Plus
arm_2L 8110481..8110505 886..912 92   Plus

BO08180.pep Sequence

Translation from 16 to 928

> BO08180.pep
MMGGGGGVAGAGFSAGASGPMLGAGGHMLMGGQGHQVHLQHQTLLPVKMD
KLVPNYDNAEHQMKFYDIRSPLVLSCNVKDGTPGGVLIWKKNGTAVTDVP
SLRGRFKLIADENKFIIDKTDTNDDGKYSCEFDGVSKEIEVIARVVVRVP
SNTAVVEGEKMSVTCSVVGTKPELTWTFANVTLTNATDRFILKPDDNGVP
NAILTLDNVTLDDRGEYKCIGRNAANVYGGNTTTPASDVTTVRVKGKFAA
LWPFLGICAEVLILCIIILIYEKRRNKSELEESDTDPQEQKKKRRNYDAS
FLDH

BO08180.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:54:53
Subject Length Description Subject Range Query Range Score Percent Strand
Bsg-PG 648 CG31605-PG 351..648 1..298 1566 100 Plus
Bsg-PB 265 CG31605-PB 24..265 49..290 1262 99.6 Plus
Bsg-PH 265 CG31605-PH 24..265 49..290 1262 99.6 Plus
Bsg-PF 265 CG31605-PF 24..265 49..290 1262 99.6 Plus
Bsg-PA 265 CG31605-PA 24..265 49..290 1262 99.6 Plus