Clone BO08182 Report

Search the DGRC for BO08182

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:81
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG3793-RA
Protein status:BO08182.pep: validated full length
Sequenced Size:1045

Clone Sequence Records

BO08182.3prime Sequence

945 bp (786 high quality bases) assembled on 2006-01-06

> BO08182.3prime
ATGGTCTAGAAAGCTTGCGTCAATGTTCAGCGAGGACATTAACTCTTCGA
CGGTGATATCTATATCCTGAAAGGCCACGCCCAGCCAGGCGACCACCAGG
CAGTAGTGCTGGAAAAGCTGGAGCAGCAGTTCACCCTCGTCCAGCATTTC
CAGCCGCTCGATTCGCTGCCTCTCGGCCGCCGAGATGCTCTCGTACACCT
GGACCATGTCCCAGGCGCGGGCGCCAGTCCAGCCGCTGTCCTTGAAGCGG
TTCCTCTGCGTATCCAGCGACAAGCAGGATTCAACGCCGGCCAGGCTGCA
GCCGCGTCCGCGCAGATTGTTGAGCATCACATCGCCGAAACGGTCGTTCA
TGTTGACCTGTTCGTAGTTGACAAAGACGGCTGCTTGGAACTTTTGCGCA
ATCCATTTGAGCAGGTTACGGCAGTTTTGCGCCTCGATATAGACCAGAAC
GCACTCGGCGAGAAATATGGTGGGCAGGGAGTAATCAACTTCTGCCTGCT
GCAGCTTGCTGTCCACCTCGTCGAGGTTGCGCAGGTCAACGCCCATCAGG
TGGTAGCTTGGTCCATGCAGATCCGTGGGACTGAGCCGCACCTCACCATC
CTCGTCGTGAATCCTGGCCAGCAGGGCCTTGTTGCGCTTAATTGTGTAGC
ACTTGCGGGCGGTGACCGTGGGGAAGTCCAGCTCAATGAAGTTCTTCACC
TGGTGGGCGGTGTCCCTCAGCCGGAAGTAGAGTGTGTCGAAGCCGCAGCC
CAAATTGATGATCTGGCAGTTGCCCGAGGTTTTCTTTAGAAACTTCTCGA
CGCACATCTCCACGCCCTTGACACGGGCAAAGTAGCCGCGATTGATCTCC
GGCGCCTTGCGCTCTTGGTTGCGCACAAAGTACCCGATGTAGTCGTCCTT
CCAGTAGCCCAAGCGCACCGCACATCGCTTGCAATCGCTGGCATC

BO08182.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:19:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG3793-PA 1014 CG3793-RA 85..1011 945..19 4635 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 15:46:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG3793-RA 1582 CG3793-RA 241..1167 945..19 4635 100 Minus
CG3793-RB 1738 CG3793-RB 241..1179 945..19 4505 98.7 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 15:46:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15764781..15765217 785..349 2155 99.5 Minus
2L 23513712 2L 15765270..15765577 360..53 1540 100 Minus
2L 23513712 2L 15764460..15764621 945..784 810 100 Minus
Blast to na_te.dros performed 2015-02-13 15:46:31
Subject Length Description Subject Range Query Range Score Percent Strand
Doc 4725 Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). 520..556 778..742 113 78.4 Minus

BO08182.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:40:25 Download gff for BO08182.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3793-PA 85..1014 18..945 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:31:49 Download gff for BO08182.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3793-PA 85..1014 18..945 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 15:59:53 Download gff for BO08182.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 241..1167 19..945 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 17:31:11 Download gff for BO08182.3prime
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 241..1167 19..945 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 17:31:11 Download gff for BO08182.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 15764460..15764621 784..945 100 -> Minus
2L 15764783..15765208 358..783 100 -> Minus
2L 15765273..15765577 53..357 100 -> Minus
2L 15765675..15765708 19..52 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 15:59:53 Download gff for BO08182.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15764460..15764621 784..945 100 -> Minus
arm_2L 15764783..15765208 358..783 100 -> Minus
arm_2L 15765273..15765577 53..357 100 -> Minus
arm_2L 15765675..15765708 19..52 100   Minus

BO08182.5prime Sequence

799 bp (798 high quality bases) assembled on 2006-01-06

> BO08182.5prime
GAAGTTATCAGTCGACATGGAGCCGCCAGCGTCGGCCGGAATCGCCGGCT
CGACGCACAAGTTCCATCCGTGCGACGAGGCTGTGATAGCCACCAACGAC
GATGCCAGCGATTGCAAGCGATGTGCGGTGCGCTTGGGCTACTGGAAGGA
CGACTACATCGGGTACTTTGTGCGCAACCAAGAGCGCAAGGCGCCGGAGA
TCAATCGCGGCTACTTTGCCCGTGTCAAGGGCGTGGAGATGTGCGTCGAG
AAGTTTCTAAAGAAAACCTCGGGCAACTGCCAGATCATCAATTTGGGCTG
CGGCTTCGACACACTCTACTTCCGGCTGAGGGACACCGCCCACCAGGTGA
AGAACTTCATTGAGCTGGACTTCCCCACGGTCACCGCCCGCAAGTGCTAC
ACAATTAAGCGCAACAAGGCCCTGCTGGCCAGGATTCACGACGAGGATGG
TGAGGTGCGGCTCAGTCCCACGGATCTGCATGGACCAAGCTACCACCTGA
TGGGCGTTGACCTGCGCAACCTCGACGAGGTGGACAGCAAGCTGCAGCAG
GCAGAAGTTGATTACTCCCTGCCCACCATATTTCTCGCCGAGTGCGTTCT
GGTCTATATCGAGGCGCAAAACTGCCGTAACCTGCTCAAATGGATTGCGC
AAAAGTTCCAAGCAGCCGTCTTTGTCAACTACGAACAGGTCAACATGAAC
GACCGTTTCGGCGATGTGATGCTCAACAATCTGCGCGGACGCGGCTGCAG
CCTGGCCGGCGTTGAATCCTGCTTGTCGCTGGATACGCAGAGGAACCGC

BO08182.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:19:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG3793-PA 1014 CG3793-RA 1..783 17..799 3915 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:35:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG3793-RB 1738 CG3793-RB 156..939 16..799 3920 100 Plus
CG3793-RA 1582 CG3793-RA 156..939 16..799 3920 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:35:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15764781..15765217 261..697 2155 99.5 Plus
2L 23513712 2L 15764375..15764621 16..262 1235 100 Plus
2L 23513712 2L 15765270..15765383 686..799 570 100 Plus
Blast to na_te.dros performed 2015-02-04 20:35:47
Subject Length Description Subject Range Query Range Score Percent Strand
Doc 4725 Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). 520..556 268..304 113 78.4 Plus

BO08182.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:40:26 Download gff for BO08182.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3793-PA 1..783 17..799 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:31:50 Download gff for BO08182.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3793-PA 1..783 17..799 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:27:51 Download gff for BO08182.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 150..939 9..799 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:52:19 Download gff for BO08182.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 150..939 9..799 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:52:19 Download gff for BO08182.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 15764369..15764621 9..262 98 -> Plus
2L 15764783..15765208 263..688 100 -> Plus
2L 15765273..15765383 689..799 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:27:51 Download gff for BO08182.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15764369..15764621 9..262 98 -> Plus
arm_2L 15764783..15765208 263..688 100 -> Plus
arm_2L 15765273..15765383 689..799 100   Plus

BO08182.complete Sequence

1045 bp (1045 high quality bases) assembled on 2005-12-21

GenBank Submission: FJ631092

> BO08182.complete
GAAGTTATCAGTCGACATGGAGCCGCCAGCGTCGGCCGGAATCGCCGGCT
CGACGCACAAGTTCCATCCGTGCGACGAGGCTGTGATAGCCACCAACGAC
GATGCCAGCGATTGCAAGCGATGTGCGGTGCGCTTGGGCTACTGGAAGGA
CGACTACATCGGGTACTTTGTGCGCAACCAAGAGCGCAAGGCGCCGGAGA
TCAATCGCGGCTACTTTGCCCGTGTCAAGGGCGTGGAGATGTGCGTCGAG
AAGTTTCTAAAGAAAACCTCGGGCAACTGCCAGATCATCAATTTGGGCTG
CGGCTTCGACACACTCTACTTCCGGCTGAGGGACACCGCCCACCAGGTGA
AGAACTTCATTGAGCTGGACTTCCCCACGGTCACCGCCCGCAAGTGCTAC
ACAATTAAGCGCAACAAGGCCCTGCTGGCCAGGATTCACGACGAGGATGG
TGAGGTGCGGCTCAGTCCCACGGATCTGCATGGACCAAGCTACCACCTGA
TGGGCGTTGACCTGCGCAACCTCGACGAGGTGGACAGCAAGCTGCAGCAG
GCAGAAGTTGATTACTCCCTGCCCACCATATTTCTCGCCGAGTGCGTTCT
GGTCTATATCGAGGCGCAAAACTGCCGTAACCTGCTCAAATGGATTGCGC
AAAAGTTCCAAGCAGCCGTCTTTGTCAACTACGAACAGGTCAACATGAAC
GACCGTTTCGGCGATGTGATGCTCAACAATCTGCGCGGACGCGGCTGCAG
CCTGGCCGGCGTTGAATCCTGCTTGTCGCTGGATACGCAGAGGAACCGCT
TCAAGGACAGCGGCTGGACTGGCGCCCGCGCCTGGGACATGGTCCAGGTG
TACGAGAGCATCTCGGCGGCCGAGAGGCAGCGAATCGAGCGGCTGGAAAT
GCTGGACGAGGGTGAACTGCTGCTCCAGCTTTTCCAGCACTACTGCCTGG
TGGTCGCCTGGCTGGGCGTGGCCTTTCAGGATATAGATATCACCGTCGAA
GAGTTAATGTCCTCGCTGAACATTGACGCAAGCTTTCTAGACCAT

BO08182.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:07:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG3793-RA 1014 CG3793-PA 1..1011 17..1027 5055 100 Plus
CG3793-RB 1026 CG3793-PB 1..1023 17..1027 4900 98.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:07:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG3793-RA 1582 CG3793-RA 156..1167 16..1027 5060 100 Plus
CG3793-RB 1738 CG3793-RB 156..1179 16..1027 4905 98.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:07:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 15764781..15765217 261..697 2155 99.5 Plus
2L 23513712 2L 15765270..15765577 686..993 1540 100 Plus
2L 23513712 2L 15764375..15764621 16..262 1235 100 Plus
Blast to na_te.dros performed 2014-11-27 20:07:07
Subject Length Description Subject Range Query Range Score Percent Strand
Doc 4725 Doc DMW1DOC 4725bp Derived from X17551 (g8821) (Rel. 29, Last updated, Version 2). 520..556 268..304 113 78.4 Plus

BO08182.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:12:27 Download gff for BO08182.complete
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 1..1014 17..1028 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:33:26 Download gff for BO08182.complete
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 140..1157 9..1027 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:03:23 Download gff for BO08182.complete
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 157..1167 17..1029 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:12:27 Download gff for BO08182.complete
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 140..1157 9..1027 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:15:11 Download gff for BO08182.complete
Subject Subject Range Query Range Percent Splice Strand
CG3793-RA 157..1167 17..1029 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:15:11 Download gff for BO08182.complete
Subject Subject Range Query Range Percent Splice Strand
2L 15764376..15764621 17..262 100 -> Plus
2L 15764783..15765208 263..688 100 -> Plus
2L 15765273..15765577 689..993 100 -> Plus
2L 15765675..15765708 994..1029 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:03:23 Download gff for BO08182.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 15764376..15764621 17..262 100 -> Plus
arm_2L 15764783..15765208 263..688 100 -> Plus
arm_2L 15765273..15765577 689..993 100 -> Plus
arm_2L 15765675..15765708 994..1029 94   Plus

BO08182.pep Sequence

Translation from 16 to 1045

> BO08182.pep
MEPPASAGIAGSTHKFHPCDEAVIATNDDASDCKRCAVRLGYWKDDYIGY
FVRNQERKAPEINRGYFARVKGVEMCVEKFLKKTSGNCQIINLGCGFDTL
YFRLRDTAHQVKNFIELDFPTVTARKCYTIKRNKALLARIHDEDGEVRLS
PTDLHGPSYHLMGVDLRNLDEVDSKLQQAEVDYSLPTIFLAECVLVYIEA
QNCRNLLKWIAQKFQAAVFVNYEQVNMNDRFGDVMLNNLRGRGCSLAGVE
SCLSLDTQRNRFKDSGWTGARAWDMVQVYESISAAERQRIERLEMLDEGE
LLLQLFQHYCLVVAWLGVAFQDIDITVEELMSSLNIDASFLDH

BO08182.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 18:54:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG3793-PA 337 CG3793-PA 1..337 1..337 1783 100 Plus
CG3793-PB 341 CG3793-PB 1..341 1..337 1768 98.8 Plus