Clone BO08215 Report

Search the DGRC for BO08215

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:82
Well:15
Vector:pDNR-Dual
Associated Gene/TranscriptCG10585-RA
Protein status:BO08215.pep: validated full length
Sequenced Size:1378

Clone Sequence Records

BO08215.3prime Sequence

919 bp (768 high quality bases) assembled on 2006-01-06

> BO08215.3prime
ATGGTCTAGAAAGCTTGCAAGATCCTGCATGGCCAGAATGATGTTCTCCA
GAGCCTGTCGAGCGTCCGTCGCCGGGAAATGTTGCAGAACGGCCAGGGCA
GCGGCTGTGTGCTTCCGCTGCAGTTCCTTGGTTTTGGCCAAAGCCGGCCC
GGCCAGAATGGCCTTGTGGATCTTGTCGTAGTCGATGTTATCGACCGACT
GCTTGCCAGCCTCCAATTGAGAATACATGCCAGGGTCGTGCTCCAAGTGG
AATAGGACTGGAGCACTAACCAGACTGAAAGTAACATCTAGCGGCAGTTG
GGGGCACTGAAAAGGTTCGGCATCCAAGCAAGCCTGCCAAGCGAGCGCCA
AATGTTTGCCAAAGCGGTAAGCATGTCGCTGCAGTTCCTCACTCTGTCCG
GCCAGCTTTAGCGAAGCTTGGCAGGATTTGCCCAGCAGGCTACCCGCATT
AAGGATATTACGGCACTCCCATTCCTCCTCCGGATTGCCGAGAACCTGGG
CAATCGGCATTGGCGTCATCACGTCGTGCTCGTTGAAATCCACTCCAACG
CTGAGAGATGGTCGCTGGAAGGTTCCTGGCTTATAAGGCAGCGGGTTGTT
CTGTTCATCACGCTCTCCAATGAATTCCGACTCGGAAAAATCTCGCACCG
CCGACGAGATCAGCTCCACCACCTCCTGGTTGCGCAGATTAGCCAGCTCC
GCACTGGAATGGCCCAGAAGATAGTCGCCGGTCAGCAGGCCGATCTTGTT
GCCAAACGACATGTCGTCGTAGGTGTCCACATCCTGCCCAGCCTGCGTGC
TCGATTGCAGATTAACCACGCTATTGTGCACCAGATGAGATATCCGTATC
ATCTCGGTGACCTCGGCCAAAGCCCTTTGGGAGTGCAGCACTCCGGCACT
CTTGTCCCTGCTCACGTCT

BO08215.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:19:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG10585-PA 1347 CG10585-RA 456..1344 907..19 4445 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 14:55:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG10585-RB 1699 CG10585-RB 546..1446 919..19 4460 99.8 Minus
CG10585-RA 1990 CG10585-RA 837..1737 919..19 4460 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 14:54:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21029085..21029888 822..19 4020 100 Minus
3L 28110227 3L 21028821..21028905 907..823 425 100 Minus
Blast to na_te.dros performed on 2015-02-13 14:54:59 has no hits.

BO08215.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:41:09 Download gff for BO08215.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10585-PA 444..1347 16..919 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:32:53 Download gff for BO08215.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10585-PA 444..1347 16..919 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-03 11:14:15 Download gff for BO08215.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 837..1737 19..919 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 16:31:57 Download gff for BO08215.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 837..1737 19..919 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 16:31:57 Download gff for BO08215.3prime
Subject Subject Range Query Range Percent Splice Strand
3L 21028809..21028905 823..919 97 -> Minus
3L 21029085..21029888 19..822 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-03 11:14:15 Download gff for BO08215.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21021909..21022005 823..919 97 -> Minus
arm_3L 21022185..21022988 19..822 100   Minus

BO08215.5prime Sequence

897 bp (862 high quality bases) assembled on 2006-01-06

> BO08215.5prime
GAAGTTATCAGTCGACATGGCCATGTACCGCGCCAGTGGGTTAAGGATTA
TGCAACAGATGCGACGCAGGATTCCCGTCGAACTGCAGCCACTCCAAGTG
GCCAAAGCTGCGCCTGCGCTGCAAACTTTCACTTCTCAGCGCTGGACTTC
GACGACGACGACCAGTGGAAAGCATGCCAGTCCACAGGTTACGACCCCGC
CCCCGAGACACGACTGGAATAGGGCGGTCAGCGAGGCGGAGCGCATCGTC
GGCTATCCCACATCCTTCCTCAGTCTGCGCTGGCTGCTCAGCGACGAGAT
CGCCAATGTGGCGCTGCACCTGCGCAAACTGGTGGGCAGCGCCCATCCGC
TGATGAAGACGGCCAAGCACCTGCTCTACAATGGCAAGAACACGATGCAA
GCCTGGGGATTGATAGTGCTCCTGGTGTCCAAGGCCGCAGGACATGCACC
CAGTGTTCCAGACGTGGAGCAGGACAAGAGTGCCGGAGTGCTGCACTCCC
AAAGGGCTTTGGCCGAGGTCACCGAGATGATACGGATATCTCATCTGGTG
CACAATAGCGTGGTTAATCTGCAATCGAGCACGCAGGCTGGGCAGGATGT
GGACACCTACGACGACATGTCGTTTGGCAACAAGATCGGCCTGCTGACCG
GCGACTATCTTCTGGGCCATTCCAGTGCGGAGCTGGCTAATCTGCGCAAC
CAGGAGGTGGTGGAGCTGATCTCGTCGGCGGTGCGAGATTTTTCCGAGTC
GGAATTCATTGGAGAGCGTGATGAACAGAACAACCCGCTGCCTTATAAGC
CAGGAACCTTCCAGCGACCATCTCTCAGCGTTGGAGTGGATTTCAACGAG
CACGACGTGATGACGCCNATGCCGATTGGCCAGGTTCTCGGCAATCC

BO08215.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:19:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG10585-PA 1347 CG10585-RA 1..881 17..897 4361 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:41:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG10585-RB 1699 CG10585-RB 103..983 17..897 4379 99.8 Plus
CG10585-RA 1990 CG10585-RA 394..1274 17..897 4379 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:41:31
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21028308..21028658 17..367 1755 100 Plus
3L 28110227 3L 21029085..21029425 557..897 1679 99.4 Plus
3L 28110227 3L 21028716..21028905 367..556 950 100 Plus
Blast to na_te.dros performed on 2015-02-13 05:41:33 has no hits.

BO08215.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:41:10 Download gff for BO08215.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10585-PA 1..881 17..897 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:32:55 Download gff for BO08215.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10585-PA 1..881 17..897 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:06:36 Download gff for BO08215.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 394..1274 17..897 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:58:13 Download gff for BO08215.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 394..1274 17..897 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:58:13 Download gff for BO08215.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 21028308..21028657 17..366 100 -> Plus
3L 21028716..21028905 367..556 100 -> Plus
3L 21029085..21029425 557..897 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:06:36 Download gff for BO08215.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21021816..21022005 367..556 100 -> Plus
arm_3L 21021408..21021757 17..366 100 -> Plus
arm_3L 21022185..21022525 557..897 99   Plus

BO08215.complete Sequence

1378 bp (1378 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ631100

> BO08215.complete
GAAGTTATCAGTCGACATGGCCATGTACCGCGCCAGTGGGTTAAGGATTA
TGCAACAGATGCGACGCAGGATTCCCGTCGAACTGCAGCCACTCCAAGTG
GCCAAAGCTGCGCCTGCGCTGCAAACTTTCACTTCTCAGCGCTGGACTTC
GACGACGACGACCAGTGGAAAGCATGCCAGTCCACAGGTTACGACCCCGC
CCCCGAGACACGACTGGAATAGGGCGGTCAGCGAGGCGGAGCGCATCGTC
GGCTATCCCACATCCTTCCTCAGTCTGCGCTGGCTGCTCAGCGACGAGAT
CGCCAATGTGGCGCTGCACCTGCGCAAACTGGTGGGCAGCGCCCATCCGC
TGATGAAGACGGCCAAGCACCTGCTCTACAATGGCAAGAACACGATGCAA
GCCTGGGGATTGATAGTGCTCCTGGTGTCCAAGGCCGCAGGACATGCACC
CAGTGTTCCAGACGTGGAGCAGGACAAGAGTGCCGGAGTGCTGCACTCCC
AAAGGGCTTTGGCCGAGGTCACCGAGATGATACGGATATCTCATCTGGTG
CACAATAGCGTGGTTAATCTGCAATCGAGCACGCAGGCTGGGCAGGATGT
GGACACCTACGACGACATGTCGTTTGGCAACAAGATCGGCCTGCTGACCG
GCGACTATCTTCTGGGCCATTCCAGTGCGGAGCTGGCTAATCTGCGCAAC
CAGGAGGTGGTGGAGCTGATCTCGTCGGCGGTGCGAGATTTTTCCGAGTC
GGAATTCATTGGAGAGCGTGATGAACAGAACAACCCGCTGCCTTATAAGC
CAGGAACCTTCCAGCGACCATCTCTCAGCGTTGGAGTGGATTTCAACGAG
CACGACGTGATGACGCCAATGCCGATTGCCCAGGTTCTCGGCAATCCGGA
GGAGGAATGGGAGTGCCGTAATATCCTTAATGCGGGTAGCCTGCTGGGCA
AATCCTGCCAAGCTTCGCTAAAGCTGGCCGGACAGAGTGAGGAACTGCAG
CGACATGCTTACCGCTTTGGCAAACATTTGGCGCTCGCTTGGCAGGCTTG
CTTGGATGCCGAACCTTTTCAGTGCCCCCAACTGCCGCTAGATGTTACTT
TCAGTCTGGTTAGTGCTCCAGTCCTATTCCACTTGGAGCACGACCCTGGC
ATGTATTCTCAATTGGAGGCTGGCAAGCAGTCGGTCGATAACATCGACTA
CGACAAGATCCACAAGGCCATTCTGGCCGGGCCGGCTTTGGCCAAAACCA
AGGAACTGCAGCGGAAGCACACAGCCGCTGCCCTGGCCGTTCTGCAACAT
TTCCCGGCGACGGACGCTCGACAGGCTCTGGAGAACATCATTCTGGCCAT
GCAGGATCTTGCAAGCTTTCTAGACCAT

BO08215.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:35:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG10585-RB 1347 CG10585-PB 1..1344 17..1360 6720 100 Plus
CG10585-RA 1347 CG10585-PA 1..1344 17..1360 6720 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:35:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG10585-RB 1699 CG10585-RB 103..1446 17..1360 6720 100 Plus
CG10585-RA 1990 CG10585-RA 394..1737 17..1360 6720 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:35:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 21029085..21029888 557..1360 4020 100 Plus
3L 28110227 3L 21028308..21028658 17..367 1755 100 Plus
3L 28110227 3L 21028716..21028905 367..556 950 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:35:09 has no hits.

BO08215.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:11:09 Download gff for BO08215.complete
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 1..1347 17..1363 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:31:53 Download gff for BO08215.complete
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 414..1757 17..1360 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:55:09 Download gff for BO08215.complete
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 394..1737 17..1362 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:11:10 Download gff for BO08215.complete
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 414..1757 17..1360 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:23:04 Download gff for BO08215.complete
Subject Subject Range Query Range Percent Splice Strand
CG10585-RA 394..1737 17..1362 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:23:04 Download gff for BO08215.complete
Subject Subject Range Query Range Percent Splice Strand
3L 21028308..21028657 17..366 100 -> Plus
3L 21028716..21028905 367..556 100 -> Plus
3L 21029085..21029888 557..1362 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:55:09 Download gff for BO08215.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 21021408..21021757 17..366 100 -> Plus
arm_3L 21021816..21022005 367..556 100 -> Plus
arm_3L 21022185..21022988 557..1362 99   Plus

BO08215.pep Sequence

Translation from 16 to 1378

> BO08215.pep
MAMYRASGLRIMQQMRRRIPVELQPLQVAKAAPALQTFTSQRWTSTTTTS
GKHASPQVTTPPPRHDWNRAVSEAERIVGYPTSFLSLRWLLSDEIANVAL
HLRKLVGSAHPLMKTAKHLLYNGKNTMQAWGLIVLLVSKAAGHAPSVPDV
EQDKSAGVLHSQRALAEVTEMIRISHLVHNSVVNLQSSTQAGQDVDTYDD
MSFGNKIGLLTGDYLLGHSSAELANLRNQEVVELISSAVRDFSESEFIGE
RDEQNNPLPYKPGTFQRPSLSVGVDFNEHDVMTPMPIAQVLGNPEEEWEC
RNILNAGSLLGKSCQASLKLAGQSEELQRHAYRFGKHLALAWQACLDAEP
FQCPQLPLDVTFSLVSAPVLFHLEHDPGMYSQLEAGKQSVDNIDYDKIHK
AILAGPALAKTKELQRKHTAAALAVLQHFPATDARQALENIILAMQDLAS
FLDH

BO08215.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:19:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG10585-PB 448 CG10585-PB 1..448 1..448 2306 100 Plus
CG10585-PA 448 CG10585-PA 1..448 1..448 2306 100 Plus