Clone Sequence Records
BO08221.3prime Sequence
948 bp (822 high quality bases) assembled on 2006-01-06
> BO08221.3prime
ATGGTCTAGAAAGCTTGCATACAACCGCGGCCGCAGCCCAACATTTACCC
CGCTCTTGGAGCGCAGCACTATTTTAATGGATGGCTCCACATCGGCTCCC
ATTGGAAGCAGCTGGTAGTGGCGTATCACTTTGGTCACCATGGTTTTCAT
CTCCAGCAGAGCAAACTTTTGACCAATGCAGTTCCTCGGCCCAGCGGAGA
AAGGTATGTAGCTGTAGGGACTCAGTCTGGGTGCCTCTTCTCCTAGATGC
CTCTCCGGCTGGAAGACCAGTGGATCGGTGAAGATCGCTTCATCCCGGAG
GAGCTGCCAGAGAAGTACGACCACGTTGGTTCCCACAGGGATGTAGCCCT
CATCTATAACCAAATCCTTTTCCAGGCAGCGTGCGACGGCCGGAATAGGC
GGATAAAGACGCAGGGACTCTTTGACCACGCAGCTTAGATACGGTAACGT
CGCGAAATCCGAGAGAATAACGCCTCTGAATAAATCCTGGCCGTAGTGCA
TCCTCAGTTCCTCAAAAAGCTTTTGTTGCACTGCCTCATGGCGGGAAAGC
AGATACAAACAGAAGGAAACCGCTGAAGTCGTCGTATCGTGACCCTCAAA
GATGAAAGTGTTCACTTCATCGCGAATTTGCTTGTCAGTCAATGGTTGCC
CATCCACAGTTGCCCGCAGGAGCGTGTCCAGCAGGGCGTGGGGCTTTGTT
GGCTTATCTTGATTAGCCTCCCTGGCCAGTAAACGGCGTCGCTGCTCTAT
AATTCCGTTGGTAAACTCATGGAGGCAGATGACTCCTGCCTGTTGCTTTC
TGAATCCGCTGGGCCAGCACAGGCGAAAGAGGTGGGGAAAGAGGAGATGC
GGCCTCATGAACCTGGTGGCCAAGATGTTGGTTAGATCTTTTACAGCGTG
CACCACCTCAGAGTCAGCTCCTTGAGCGTCCACGTTCACGCCCATAAC
BO08221.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:19:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10755-PA | 1491 | Cyp4ae1-RA | 561..1488 | 946..19 | 4640 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:03:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4ae1-RA | 1822 | CG10755-RA | 651..1578 | 946..19 | 4640 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:03:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2179826..2180363 | 886..349 | 2675 | 99.8 | Minus |
X | 23542271 | X | 2180418..2180754 | 355..19 | 1685 | 100 | Minus |
X | 23542271 | X | 2179711..2179770 | 946..887 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-11 18:03:26 has no hits.
BO08221.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:41:20 Download gff for
BO08221.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10755-PA | 559..1491 | 16..948 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:33:09 Download gff for
BO08221.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10755-PA | 559..1491 | 16..948 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:46:18 Download gff for
BO08221.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 649..1582 | 15..948 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:45:05 Download gff for
BO08221.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 649..1582 | 15..948 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:45:05 Download gff for
BO08221.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2179709..2179770 | 887..948 | 98 | -> | Minus |
X | 2179826..2180358 | 354..886 | 100 | -> | Minus |
X | 2180420..2180758 | 15..353 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:46:18 Download gff for
BO08221.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2073742..2073803 | 887..948 | 98 | -> | Minus |
arm_X | 2073859..2074391 | 354..886 | 100 | -> | Minus |
arm_X | 2074453..2074791 | 15..353 | 99 | | Minus |
BO08221.5prime Sequence
901 bp (794 high quality bases) assembled on 2006-01-06
> BO08221.5prime
GAAGTTATCAGTCGACATGTTGGTGGTTTTGTTGGTGGCCCTCCTGGTGA
CTCGCCTAGTGGCCTCGCTGTTCCGTTTGGCGCTAAAGGAGCTTCGACAT
CCTTTGCAAGGCGTTGTGCCAAGTGTTTCGAGAGTTCCTCTACTAGGAGC
CGCCTGGCAGATGCGGAGTTTTCAGCCAGACAACTTGCATGATAAGTTCG
CCGAGTATGTTAAGCGTTTTGGTCGCAGTTTCATGGGCACTGTCTTAGGC
CATGTGGTTATGGTTACAGCGGAGCCCCGACATATCGATGCACTGCTGCA
GGGTCAGCATCAGTTGAAGAAGGGCACGATGTACTTTGCCTTACGCGGTT
GGCTGGGCGATGGACTGCTGCTGAGTCGTGGAAAGGAGTGGCACACGATG
CGCAAAATCATCACGCCCACGTTTCACTTTAGCATCCTGGAGCAGTTTGT
CGAGGTCTTCGATAGGCAGAGCAGCATATTAGTGGAGCGTTTGAGAACGC
TGTCGTACGGCAACGAGGTCGTGAACATCTATCCCTTGGTGGGCTTGGCT
GCCCTAGACATAATCACCGAAACTGCTATGGGCGTGAACGTGGACGCTCA
AGGAGCTGACTCTGAGGTGGTGCACGCTGTAAAAGATCTAACCAACATCT
TGGCCACCAGGTTCATGAGGCCGCATCTCCTCTTTCCCCACCTCTTTCGC
CTGTGCTGGCCCAGCGGATTCAGAAAGCAACAGGCAGGAGTCATCTGCCT
CCATGAGTTTACCAACGGAATTATAGAGCAGCGACGCCGTTTACTGGCCA
GGGAGGCTAATCAAGATAAGCCAAACAAGCCCCACGCCCTGCTGGACACG
CTCCTGCGGGCAACTGTGGATGGGCAACATTGACTGACAAGCAAATTCGC
G
BO08221.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:19:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10755-PA | 1491 | Cyp4ae1-RA | 1..862 | 17..878 | 4260 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:41:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4ae1-RA | 1822 | CG10755-RA | 89..976 | 15..901 | 4385 | 99.7 | Plus |
Cyp4d8-RA | 1573 | CG4321-RA | 319..432 | 350..463 | 215 | 82.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:41:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2179317..2179770 | 183..636 | 2270 | 100 | Plus |
X | 23542271 | X | 2179826..2180091 | 637..901 | 1250 | 98.9 | Plus |
X | 23542271 | X | 2179095..2179262 | 15..182 | 840 | 100 | Plus |
3L | 28110227 | 3L | 7494829..7494942 | 463..350 | 195 | 78.1 | Minus |
Blast to na_te.dros performed on 2015-02-13 05:41:38 has no hits.
BO08221.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:41:21 Download gff for
BO08221.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10755-PA | 1..886 | 17..901 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:33:10 Download gff for
BO08221.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10755-PA | 1..886 | 17..901 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:06:39 Download gff for
BO08221.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 86..976 | 12..901 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:58:19 Download gff for
BO08221.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 86..976 | 12..901 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:58:19 Download gff for
BO08221.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2179826..2180091 | 637..901 | 98 | | Plus |
X | 2179092..2179262 | 12..182 | 99 | -> | Plus |
X | 2179317..2179770 | 183..636 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:06:39 Download gff for
BO08221.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2073125..2073295 | 12..182 | 99 | -> | Plus |
arm_X | 2073350..2073803 | 183..636 | 100 | -> | Plus |
arm_X | 2073859..2074124 | 637..901 | 98 | | Plus |
BO08221.complete Sequence
1522 bp (1522 high quality bases) assembled on 2006-01-10
GenBank Submission: FJ631103
> BO08221.complete
GAAGTTATCAGTCGACATGTTGGTGGTTTTGTTGGTGGCCCTCCTGGTGA
CTCGCCTAGTGGCCTCGCTGTTCCGTTTGGCGCTAAAGGAGCTTCGACAT
CCTTTGCAAGGCGTTGTGCCAAGTGTTTCGAGAGTTCCTCTACTAGGAGC
CGCCTGGCAGATGCGGAGTTTTCAGCCAGACAACTTGCATGATAAGTTCG
CCGAGTATGTTAAGCGTTTTGGTCGCAGTTTCATGGGCACTGTCTTAGGC
CATGTGGTTATGGTTACAGCGGAGCCCCGACATATCGATGCACTGCTGCA
GGGTCAGCATCAGTTGAAGAAGGGCACGATGTACTTTGCCTTACGCGGTT
GGCTGGGCGATGGACTGCTGCTGAGTCGTGGAAAGGAGTGGCACACGATG
CGCAAAATCATCACGCCCACGTTTCACTTTAGCATCCTGGAGCAGTTTGT
CGAGGTCTTCGATAGGCAGAGCAGCATATTAGTGGAGCGTTTGAGAACGC
TGTCGTACGGCAACGAGGTCGTGAACATCTATCCCTTGGTGGGCTTGGCT
GCCCTAGACATAATCACCGAAACTGCTATGGGCGTGAACGTGGACGCTCA
AGGAGCTGACTCTGAGGTGGTGCACGCTGTAAAAGATCTAACCAACATCT
TGGCCACCAGGTTCATGAGGCCGCATCTCCTCTTTCCCCACCTCTTTCGC
CTGTGCTGGCCCAGCGGATTCAGAAAGCAACAGGCAGGAGTCATCTGCCT
CCATGAGTTTACCAACGGAATTATAGAGCAGCGACGCCGTTTACTGGCCA
GGGAGGCTAATCAAGATAAGCCAACAAAGCCCCACGCCCTGCTGGACACG
CTCCTGCGGGCAACTGTGGATGGGCAACCATTGACTGACAAGCAAATTCG
CGATGAAGTGAACACTTTCATCTTTGAGGGTCACGATACGACGACTTCAG
CGGTTTCCTTCTGTTTGTATCTGCTTTCCCGCCATGAGGCAGTGCAACAA
AAGCTTTTTGAGGAACTGAGGATGCACTACGGCCAGGATTTATTCAGAGG
CGTTATTCTCTCGGATTTCGCGACGTTACCGTATCTAAGCTGCGTGGTCA
AAGAGTCCCTGCGTCTTTATCCGCCTATTCCGGCCGTCGCACGCTGCCTG
GAAAAGGATTTGGTTATAGATGAGGGCTACATCCCTGTGGGAACCAACGT
GGTCGTACTTCTCTGGCAGCTCCTCCGGGATGAAGCGATCTTCACCGATC
CACTGGTCTTCCAGCCGGAGAGGCATCTAGGAGAAGAGGCACCCAGACTG
AGTCCCTACAGCTACATACCTTTCTCCGCTGGGCCGAGGAACTGCATTGG
TCAAAAGTTTGCTCTGCTGGAGATGAAAACCATGGTGACCAAAGTGATAC
GCCACTACCAGCTGCTTCCAATGGGAGCCGATGTGGAGCCATCCATTAAA
ATAGTGCTGCGCTCCAAGAGCGGGGTAAATGTTGGGCTGCGGCCGCGGTT
GTATGCAAGCTTTCTAGACCAT
BO08221.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:27:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4ae1-RA | 1491 | CG10755-PA | 1..1488 | 17..1504 | 7440 | 100 | Plus |
Cyp4d8-RA | 1392 | CG4321-PA | 199..312 | 350..463 | 195 | 78.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:27:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4ae1-RA | 1822 | CG10755-RA | 89..1578 | 15..1504 | 7450 | 100 | Plus |
Cyp4d8-RA | 1573 | CG4321-RA | 319..432 | 350..463 | 195 | 78.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:27:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2179826..2180363 | 637..1174 | 2675 | 99.8 | Plus |
X | 23542271 | X | 2179317..2179770 | 183..636 | 2270 | 100 | Plus |
X | 23542271 | X | 2180418..2180754 | 1168..1504 | 1685 | 100 | Plus |
X | 23542271 | X | 2179095..2179262 | 15..182 | 840 | 100 | Plus |
3L | 28110227 | 3L | 7494829..7494942 | 463..350 | 195 | 78.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:27:44 has no hits.
BO08221.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:11:12 Download gff for
BO08221.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 1..1491 | 17..1507 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:31:56 Download gff for
BO08221.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 209..1705 | 12..1508 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:52:38 Download gff for
BO08221.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 96..1578 | 22..1506 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:11:12 Download gff for
BO08221.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 209..1705 | 12..1508 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:20:51 Download gff for
BO08221.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cyp4ae1-RA | 96..1578 | 22..1506 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:20:51 Download gff for
BO08221.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2179102..2179262 | 22..182 | 100 | -> | Plus |
X | 2179317..2179770 | 183..636 | 100 | -> | Plus |
X | 2179826..2180358 | 637..1169 | 100 | -> | Plus |
X | 2180420..2180754 | 1170..1506 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:52:38 Download gff for
BO08221.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2073135..2073295 | 22..182 | 100 | -> | Plus |
arm_X | 2073350..2073803 | 183..636 | 100 | -> | Plus |
arm_X | 2073859..2074391 | 637..1169 | 100 | -> | Plus |
arm_X | 2074453..2074787 | 1170..1506 | 99 | | Plus |
BO08221.pep Sequence
Translation from 16 to 1522
> BO08221.pep
MLVVLLVALLVTRLVASLFRLALKELRHPLQGVVPSVSRVPLLGAAWQMR
SFQPDNLHDKFAEYVKRFGRSFMGTVLGHVVMVTAEPRHIDALLQGQHQL
KKGTMYFALRGWLGDGLLLSRGKEWHTMRKIITPTFHFSILEQFVEVFDR
QSSILVERLRTLSYGNEVVNIYPLVGLAALDIITETAMGVNVDAQGADSE
VVHAVKDLTNILATRFMRPHLLFPHLFRLCWPSGFRKQQAGVICLHEFTN
GIIEQRRRLLAREANQDKPTKPHALLDTLLRATVDGQPLTDKQIRDEVNT
FIFEGHDTTTSAVSFCLYLLSRHEAVQQKLFEELRMHYGQDLFRGVILSD
FATLPYLSCVVKESLRLYPPIPAVARCLEKDLVIDEGYIPVGTNVVVLLW
QLLRDEAIFTDPLVFQPERHLGEEAPRLSPYSYIPFSAGPRNCIGQKFAL
LEMKTMVTKVIRHYQLLPMGADVEPSIKIVLRSKSGVNVGLRPRLYASFL
DH
BO08221.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:19:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cyp4ae1-PA | 496 | CG10755-PA | 1..496 | 1..496 | 2557 | 100 | Plus |
Cyp4d2-PB | 501 | CG3466-PB | 29..500 | 32..494 | 1091 | 45.5 | Plus |
Cyp4d2-PA | 501 | CG3466-PA | 29..500 | 32..494 | 1091 | 45.5 | Plus |
Cyp4d14-PA | 507 | CG3540-PA | 1..507 | 1..496 | 1026 | 41.5 | Plus |
Cyp4d14-PB | 510 | CG3540-PB | 1..510 | 1..496 | 1014 | 41.3 | Plus |