Clone BO08221 Report

Search the DGRC for BO08221

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:82
Well:21
Vector:pDNR-Dual
Associated Gene/TranscriptCyp4ae1-RA
Protein status:BO08221.pep: validated full length
Sequenced Size:1522

Clone Sequence Records

BO08221.3prime Sequence

948 bp (822 high quality bases) assembled on 2006-01-06

> BO08221.3prime
ATGGTCTAGAAAGCTTGCATACAACCGCGGCCGCAGCCCAACATTTACCC
CGCTCTTGGAGCGCAGCACTATTTTAATGGATGGCTCCACATCGGCTCCC
ATTGGAAGCAGCTGGTAGTGGCGTATCACTTTGGTCACCATGGTTTTCAT
CTCCAGCAGAGCAAACTTTTGACCAATGCAGTTCCTCGGCCCAGCGGAGA
AAGGTATGTAGCTGTAGGGACTCAGTCTGGGTGCCTCTTCTCCTAGATGC
CTCTCCGGCTGGAAGACCAGTGGATCGGTGAAGATCGCTTCATCCCGGAG
GAGCTGCCAGAGAAGTACGACCACGTTGGTTCCCACAGGGATGTAGCCCT
CATCTATAACCAAATCCTTTTCCAGGCAGCGTGCGACGGCCGGAATAGGC
GGATAAAGACGCAGGGACTCTTTGACCACGCAGCTTAGATACGGTAACGT
CGCGAAATCCGAGAGAATAACGCCTCTGAATAAATCCTGGCCGTAGTGCA
TCCTCAGTTCCTCAAAAAGCTTTTGTTGCACTGCCTCATGGCGGGAAAGC
AGATACAAACAGAAGGAAACCGCTGAAGTCGTCGTATCGTGACCCTCAAA
GATGAAAGTGTTCACTTCATCGCGAATTTGCTTGTCAGTCAATGGTTGCC
CATCCACAGTTGCCCGCAGGAGCGTGTCCAGCAGGGCGTGGGGCTTTGTT
GGCTTATCTTGATTAGCCTCCCTGGCCAGTAAACGGCGTCGCTGCTCTAT
AATTCCGTTGGTAAACTCATGGAGGCAGATGACTCCTGCCTGTTGCTTTC
TGAATCCGCTGGGCCAGCACAGGCGAAAGAGGTGGGGAAAGAGGAGATGC
GGCCTCATGAACCTGGTGGCCAAGATGTTGGTTAGATCTTTTACAGCGTG
CACCACCTCAGAGTCAGCTCCTTGAGCGTCCACGTTCACGCCCATAAC

BO08221.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:19:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG10755-PA 1491 Cyp4ae1-RA 561..1488 946..19 4640 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:03:30
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4ae1-RA 1822 CG10755-RA 651..1578 946..19 4640 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:03:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2179826..2180363 886..349 2675 99.8 Minus
X 23542271 X 2180418..2180754 355..19 1685 100 Minus
X 23542271 X 2179711..2179770 946..887 300 100 Minus
Blast to na_te.dros performed on 2015-02-11 18:03:26 has no hits.

BO08221.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:41:20 Download gff for BO08221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10755-PA 559..1491 16..948 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:33:09 Download gff for BO08221.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10755-PA 559..1491 16..948 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:46:18 Download gff for BO08221.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 649..1582 15..948 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:45:05 Download gff for BO08221.3prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 649..1582 15..948 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:45:05 Download gff for BO08221.3prime
Subject Subject Range Query Range Percent Splice Strand
X 2179709..2179770 887..948 98 -> Minus
X 2179826..2180358 354..886 100 -> Minus
X 2180420..2180758 15..353 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:46:18 Download gff for BO08221.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2073742..2073803 887..948 98 -> Minus
arm_X 2073859..2074391 354..886 100 -> Minus
arm_X 2074453..2074791 15..353 99   Minus

BO08221.5prime Sequence

901 bp (794 high quality bases) assembled on 2006-01-06

> BO08221.5prime
GAAGTTATCAGTCGACATGTTGGTGGTTTTGTTGGTGGCCCTCCTGGTGA
CTCGCCTAGTGGCCTCGCTGTTCCGTTTGGCGCTAAAGGAGCTTCGACAT
CCTTTGCAAGGCGTTGTGCCAAGTGTTTCGAGAGTTCCTCTACTAGGAGC
CGCCTGGCAGATGCGGAGTTTTCAGCCAGACAACTTGCATGATAAGTTCG
CCGAGTATGTTAAGCGTTTTGGTCGCAGTTTCATGGGCACTGTCTTAGGC
CATGTGGTTATGGTTACAGCGGAGCCCCGACATATCGATGCACTGCTGCA
GGGTCAGCATCAGTTGAAGAAGGGCACGATGTACTTTGCCTTACGCGGTT
GGCTGGGCGATGGACTGCTGCTGAGTCGTGGAAAGGAGTGGCACACGATG
CGCAAAATCATCACGCCCACGTTTCACTTTAGCATCCTGGAGCAGTTTGT
CGAGGTCTTCGATAGGCAGAGCAGCATATTAGTGGAGCGTTTGAGAACGC
TGTCGTACGGCAACGAGGTCGTGAACATCTATCCCTTGGTGGGCTTGGCT
GCCCTAGACATAATCACCGAAACTGCTATGGGCGTGAACGTGGACGCTCA
AGGAGCTGACTCTGAGGTGGTGCACGCTGTAAAAGATCTAACCAACATCT
TGGCCACCAGGTTCATGAGGCCGCATCTCCTCTTTCCCCACCTCTTTCGC
CTGTGCTGGCCCAGCGGATTCAGAAAGCAACAGGCAGGAGTCATCTGCCT
CCATGAGTTTACCAACGGAATTATAGAGCAGCGACGCCGTTTACTGGCCA
GGGAGGCTAATCAAGATAAGCCAAACAAGCCCCACGCCCTGCTGGACACG
CTCCTGCGGGCAACTGTGGATGGGCAACATTGACTGACAAGCAAATTCGC
G

BO08221.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:19:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG10755-PA 1491 Cyp4ae1-RA 1..862 17..878 4260 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-13 05:41:39
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4ae1-RA 1822 CG10755-RA 89..976 15..901 4385 99.7 Plus
Cyp4d8-RA 1573 CG4321-RA 319..432 350..463 215 82.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-13 05:41:37
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2179317..2179770 183..636 2270 100 Plus
X 23542271 X 2179826..2180091 637..901 1250 98.9 Plus
X 23542271 X 2179095..2179262 15..182 840 100 Plus
3L 28110227 3L 7494829..7494942 463..350 195 78.1 Minus
Blast to na_te.dros performed on 2015-02-13 05:41:38 has no hits.

BO08221.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:41:21 Download gff for BO08221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10755-PA 1..886 17..901 99   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:33:10 Download gff for BO08221.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10755-PA 1..886 17..901 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-09-01 18:06:39 Download gff for BO08221.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 86..976 12..901 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-13 07:58:19 Download gff for BO08221.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 86..976 12..901 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-13 07:58:19 Download gff for BO08221.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2179826..2180091 637..901 98   Plus
X 2179092..2179262 12..182 99 -> Plus
X 2179317..2179770 183..636 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-09-01 18:06:39 Download gff for BO08221.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2073125..2073295 12..182 99 -> Plus
arm_X 2073350..2073803 183..636 100 -> Plus
arm_X 2073859..2074124 637..901 98   Plus

BO08221.complete Sequence

1522 bp (1522 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ631103

> BO08221.complete
GAAGTTATCAGTCGACATGTTGGTGGTTTTGTTGGTGGCCCTCCTGGTGA
CTCGCCTAGTGGCCTCGCTGTTCCGTTTGGCGCTAAAGGAGCTTCGACAT
CCTTTGCAAGGCGTTGTGCCAAGTGTTTCGAGAGTTCCTCTACTAGGAGC
CGCCTGGCAGATGCGGAGTTTTCAGCCAGACAACTTGCATGATAAGTTCG
CCGAGTATGTTAAGCGTTTTGGTCGCAGTTTCATGGGCACTGTCTTAGGC
CATGTGGTTATGGTTACAGCGGAGCCCCGACATATCGATGCACTGCTGCA
GGGTCAGCATCAGTTGAAGAAGGGCACGATGTACTTTGCCTTACGCGGTT
GGCTGGGCGATGGACTGCTGCTGAGTCGTGGAAAGGAGTGGCACACGATG
CGCAAAATCATCACGCCCACGTTTCACTTTAGCATCCTGGAGCAGTTTGT
CGAGGTCTTCGATAGGCAGAGCAGCATATTAGTGGAGCGTTTGAGAACGC
TGTCGTACGGCAACGAGGTCGTGAACATCTATCCCTTGGTGGGCTTGGCT
GCCCTAGACATAATCACCGAAACTGCTATGGGCGTGAACGTGGACGCTCA
AGGAGCTGACTCTGAGGTGGTGCACGCTGTAAAAGATCTAACCAACATCT
TGGCCACCAGGTTCATGAGGCCGCATCTCCTCTTTCCCCACCTCTTTCGC
CTGTGCTGGCCCAGCGGATTCAGAAAGCAACAGGCAGGAGTCATCTGCCT
CCATGAGTTTACCAACGGAATTATAGAGCAGCGACGCCGTTTACTGGCCA
GGGAGGCTAATCAAGATAAGCCAACAAAGCCCCACGCCCTGCTGGACACG
CTCCTGCGGGCAACTGTGGATGGGCAACCATTGACTGACAAGCAAATTCG
CGATGAAGTGAACACTTTCATCTTTGAGGGTCACGATACGACGACTTCAG
CGGTTTCCTTCTGTTTGTATCTGCTTTCCCGCCATGAGGCAGTGCAACAA
AAGCTTTTTGAGGAACTGAGGATGCACTACGGCCAGGATTTATTCAGAGG
CGTTATTCTCTCGGATTTCGCGACGTTACCGTATCTAAGCTGCGTGGTCA
AAGAGTCCCTGCGTCTTTATCCGCCTATTCCGGCCGTCGCACGCTGCCTG
GAAAAGGATTTGGTTATAGATGAGGGCTACATCCCTGTGGGAACCAACGT
GGTCGTACTTCTCTGGCAGCTCCTCCGGGATGAAGCGATCTTCACCGATC
CACTGGTCTTCCAGCCGGAGAGGCATCTAGGAGAAGAGGCACCCAGACTG
AGTCCCTACAGCTACATACCTTTCTCCGCTGGGCCGAGGAACTGCATTGG
TCAAAAGTTTGCTCTGCTGGAGATGAAAACCATGGTGACCAAAGTGATAC
GCCACTACCAGCTGCTTCCAATGGGAGCCGATGTGGAGCCATCCATTAAA
ATAGTGCTGCGCTCCAAGAGCGGGGTAAATGTTGGGCTGCGGCCGCGGTT
GTATGCAAGCTTTCTAGACCAT

BO08221.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:27:45
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4ae1-RA 1491 CG10755-PA 1..1488 17..1504 7440 100 Plus
Cyp4d8-RA 1392 CG4321-PA 199..312 350..463 195 78.1 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:27:46
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4ae1-RA 1822 CG10755-RA 89..1578 15..1504 7450 100 Plus
Cyp4d8-RA 1573 CG4321-RA 319..432 350..463 195 78.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:27:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2179826..2180363 637..1174 2675 99.8 Plus
X 23542271 X 2179317..2179770 183..636 2270 100 Plus
X 23542271 X 2180418..2180754 1168..1504 1685 100 Plus
X 23542271 X 2179095..2179262 15..182 840 100 Plus
3L 28110227 3L 7494829..7494942 463..350 195 78.1 Minus
Blast to na_te.dros performed on 2014-11-28 00:27:44 has no hits.

BO08221.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:11:12 Download gff for BO08221.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 1..1491 17..1507 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:31:56 Download gff for BO08221.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 209..1705 12..1508 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:52:38 Download gff for BO08221.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 96..1578 22..1506 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:11:12 Download gff for BO08221.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 209..1705 12..1508 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:20:51 Download gff for BO08221.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp4ae1-RA 96..1578 22..1506 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:20:51 Download gff for BO08221.complete
Subject Subject Range Query Range Percent Splice Strand
X 2179102..2179262 22..182 100 -> Plus
X 2179317..2179770 183..636 100 -> Plus
X 2179826..2180358 637..1169 100 -> Plus
X 2180420..2180754 1170..1506 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:52:38 Download gff for BO08221.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2073135..2073295 22..182 100 -> Plus
arm_X 2073350..2073803 183..636 100 -> Plus
arm_X 2073859..2074391 637..1169 100 -> Plus
arm_X 2074453..2074787 1170..1506 99   Plus

BO08221.pep Sequence

Translation from 16 to 1522

> BO08221.pep
MLVVLLVALLVTRLVASLFRLALKELRHPLQGVVPSVSRVPLLGAAWQMR
SFQPDNLHDKFAEYVKRFGRSFMGTVLGHVVMVTAEPRHIDALLQGQHQL
KKGTMYFALRGWLGDGLLLSRGKEWHTMRKIITPTFHFSILEQFVEVFDR
QSSILVERLRTLSYGNEVVNIYPLVGLAALDIITETAMGVNVDAQGADSE
VVHAVKDLTNILATRFMRPHLLFPHLFRLCWPSGFRKQQAGVICLHEFTN
GIIEQRRRLLAREANQDKPTKPHALLDTLLRATVDGQPLTDKQIRDEVNT
FIFEGHDTTTSAVSFCLYLLSRHEAVQQKLFEELRMHYGQDLFRGVILSD
FATLPYLSCVVKESLRLYPPIPAVARCLEKDLVIDEGYIPVGTNVVVLLW
QLLRDEAIFTDPLVFQPERHLGEEAPRLSPYSYIPFSAGPRNCIGQKFAL
LEMKTMVTKVIRHYQLLPMGADVEPSIKIVLRSKSGVNVGLRPRLYASFL
DH

BO08221.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:19:24
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp4ae1-PA 496 CG10755-PA 1..496 1..496 2557 100 Plus
Cyp4d2-PB 501 CG3466-PB 29..500 32..494 1091 45.5 Plus
Cyp4d2-PA 501 CG3466-PA 29..500 32..494 1091 45.5 Plus
Cyp4d14-PA 507 CG3540-PA 1..507 1..496 1026 41.5 Plus
Cyp4d14-PB 510 CG3540-PB 1..510 1..496 1014 41.3 Plus