Clone Sequence Records
BO08225.3prime Sequence
881 bp (820 high quality bases) assembled on 2006-01-06
> BO08225.3prime
ATGGTCTAGAAAGCTTGCTTCGGCAGAGCTTTTGCTTTTATCATCTTGCT
TTTCACAGGACACGGCAAACACCCAGGAGCTGCCCTGTTTGTGGTCGCGG
ACCTGAATGCCGTGCTGTTGTAACAAGCTCCTCAGTTCATCACAGGCGGC
TAAAAGCTGCGGGTTCTTAACATTTCCGGAGGTGGCCCTTTCCCGCATTC
TTCCCCGAACGTTTATCACATCATTCACAAGCAAATTGGGATCAATGCTA
TGATCCGTAAAGGAAACCTTTTCTTGCAACGATTCTTTATCCTGCAACTC
TGATAGACCAAACGTGACTATGGCACGGTTTATGAAGTTTCCAGCTGCCA
ACAGCAGATCAATGCAGTAGGCGGGCTCCTCCTGTGCGTCCACTTGCTGC
TCATTTATGCAGCGACTTATGCTGCTCATCTGATCGATTAGCACGCTGAT
GGCTCTGGCGGTATCGAAATCATCTCGAAGGCAATTATCGAATTCGGTTA
CTGTATGAGTCAGTTGGGCCTTTAACGCTCCCTCGTCTAACAAGTGCACG
GGCTTCAGGAATTGGGTATAGGCACTTAGATCGGCCTGAAAGTTTCTAAA
CCGCTGCAGGGTCTGGCGAGCCGTCACCATCAACTGATCGCTATAAGGCA
TTGCATTGCGGTAATTGGACAGCAGGCAGGCCATTCGAAACTCATCGGCG
GTGTACTTCTTCAGCAGCTCCGACACGGAGATCGTGTTGCCCAGAGACTT
TGACATCTTCTCCCGATCTCCAACCATATGAAGTTGTCCGGTGTGCACCC
AATAGTTTACCCACTGGTCAGTTTTATACCGTGCACAGCACTGCGCCTCC
TCGTTTTCGTGGTGCGGAAACGCAAGTCAAG
BO08225.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:19:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8257-PA | 1677 | CG8257-RA | 823..1674 | 870..19 | 4260 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:37:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8257-RB | 2108 | CG8257-RB | 915..1775 | 878..19 | 4280 | 99.9 | Minus |
| CG8257-RA | 1813 | CG8257-RA | 915..1775 | 878..19 | 4280 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:37:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14159429..14160280 | 19..870 | 4260 | 100 | Plus |
Blast to na_te.dros performed on 2015-02-04 20:37:26 has no hits.
BO08225.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:41:27 Download gff for
BO08225.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-PA | 810..1677 | 15..881 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:33:20 Download gff for
BO08225.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-PA | 810..1677 | 15..881 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:28:09 Download gff for
BO08225.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 911..1783 | 11..881 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:52:35 Download gff for
BO08225.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 911..1783 | 11..881 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:52:35 Download gff for
BO08225.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14159421..14160293 | 11..881 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:28:09 Download gff for
BO08225.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10046926..10047798 | 11..881 | 99 | | Plus |
BO08225.5prime Sequence
906 bp (826 high quality bases) assembled on 2006-01-06
> BO08225.5prime
GAAGTTATCAGTCGACATGTATAGCCTCAAGGAGGGGCTCCGGGCTCTTA
ACAGTCGAACGAGACCAGCTCTCATTTGCCGGCGCAACATTTCGGAGGAG
GCTCCCAAACAGGATAGTCCGTTTAAATGGAGAAAACCAATTGGCCAGCA
CACAGGAATCAATATATACAATCACGGCTTGCGGCAGAAGGTACCCCTAA
TCCTACGCAATCCCCAAATGGTCACATGGTACACTTGCGGACCCACTGTT
TATGACTCCGCGCACCTAGGTCATGCCAGCACCTATGTCAAGGTAGACAT
CCTGCAGCGCATTCTCCGCGATTATTTTAAAATCAACCTGGTGACAGCCA
TGAACATCACGGATGTTGACGACAAGATCATTAAGCGGGCCCAGCTCGCT
GGACTGGACTGGCAGAAGATGGCGCGAGCTTATGAAGCGGAATTTCGTCA
GGACATGTTGCGTCTCAATGTTCAGGCGCCGGATGTGCGCAGTCATGTGA
CTACCACCATGCCTGTCATTATTCAGTTCATTCAGCAGCTGATAGACGGA
AAGCAGGCTTACGTTACCCCGGATAACTCTGTTTACTTTGATGTCTCCAA
AAGCAAGAACTATGGAAAGCTTCAAAACTTAGGCCTAAGCGAGGACAAAT
TGGACCCCATCAAACGAAACACTGCCGATTTTGCCTTGTGGAAGGCGCGT
AAAAGTGGCAGTGAGCCCACGTGGGCTGCACCCTGGGGTGGCGAGGGACG
CCCCGGTTGGCACATTGAATGCAGCGCCATTGCAGGTTTATTCTTTGGCC
GCCAGTTGGACATTCATGCTGGCGGCTTGGACTTGCGTTTTCCGCACCAC
GAAAACGAGGAGGCGCAGTGCTGTGCACGGTATAAAACTGACCAGTGGGT
AAACTA
BO08225.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:19:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8257-PA | 1677 | CG8257-RA | 1..890 | 17..906 | 4450 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 14:58:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8257-RB | 2108 | CG8257-RB | 102..991 | 17..906 | 4450 | 100 | Plus |
| CG8257-RA | 1813 | CG8257-RA | 102..991 | 17..906 | 4450 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 14:58:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14160213..14161091 | 906..28 | 4395 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 14:58:08 has no hits.
BO08225.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:41:28 Download gff for
BO08225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-PA | 1..889 | 17..905 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:33:21 Download gff for
BO08225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-PA | 1..889 | 17..905 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-15 06:12:57 Download gff for
BO08225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 102..990 | 17..905 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 18:11:15 Download gff for
BO08225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 102..990 | 17..905 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 18:11:15 Download gff for
BO08225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14160214..14161091 | 28..905 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-15 06:12:57 Download gff for
BO08225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10047719..10048596 | 28..905 | 100 | | Minus |
BO08225.complete Sequence
1708 bp (1708 high quality bases) assembled on 2006-08-17
GenBank Submission: FJ631105
> BO08225.complete
GAAGTTATCAGTCGACATGTATAGCCTCAAGGAGGGGCTCCGGGCTCTTA
ACAGTCGAACGAGACCAGCTCTCATTTGCCGGCGCAACATTTCGGAGGAG
GCTCCCAAACAGGATAGTCCGTTTAAATGGAGAAAACCAATTGGCCAGCA
CACAGGAATCAATATATACAATCACGGCTTGCGGCAGAAGGTACCCCTAA
TCCTACGCAATCCCCAAATGGTCACATGGTACACTTGCGGACCCACTGTT
TATGACTCCGCGCACCTAGGTCATGCCAGCACCTATGTCAAGGTAGACAT
CCTGCAGCGCATTCTCCGCGATTATTTTAAAATCAACCTGGTGACAGCCA
TGAACATCACGGATGTTGACGACAAGATCATTAAGCGGGCCCAGCTCGCT
GGACTGGACTGGCAGAAGATGGCGCGAGCTTATGAAGCGGAATTTCGTCA
GGACATGTTGCGTCTCAATGTTCAGGCGCCGGATGTGCGCAGTCATGTGA
CTACCACCATGCCTGTCATTATTCAGTTCATTCAGCAGCTGATAGACGGA
AAGCAGGCTTACGTTACCCCGGATAACTCTGTTTACTTTGATGTCTCCAA
AAGCAAGAACTATGGAAAGCTTCAAAACTTAGGCCTAAGCGAGGACAAAT
TGGACCCCATCAAACGAAACACTGCCGATTTTGCCTTGTGGAAGGCGCGT
AAAAGTGGCAGTGAGCCCACGTGGGCTGCACCCTGGGGTGGCGAGGGACG
CCCCGGTTGGCACATTGAATGCAGCGCCATTGCAGGTTTATTCTTTGGCC
GCCAGTTGGACATTCATGCTGGCGGCTTGGACTTGCGTTTTCCGCACCAC
GAAAACGAGGAGGCGCAGTGCTGTGCACGGTATAAAACTGACCAGTGGGT
AAACTATTGGGTGCACACCGGACAACTTCATATGGTTGGAGATCGGGAGA
AGATGTCAAAGTCTCTGGGCAACACGATCTCCGTGTCGGAGCTGCTGAAG
AAGTACACCGCCGATGAGTTTCGAATGGCCTGCCTGCTGTCCAATTACCG
CAATGCAATGCCTTATAGCGATCAGTTGATGGTGACGGCTCGCCAGACCC
TGCAGCGGTTTAGAAACTTTCAGGCCGATCTAAGTGCCTATACCCAATTC
CTGAAGCCCGTGCACTTGTTAGACGAGGGAGCGTTAAAGGCCCAACTGAC
TCATACAGTAACCGAATTCGATAATTGCCTTCGAGATGATTTCGATACCG
CCAGAGCCATCAGCGTGCTAATCGATCAGATGAGCAGCATAAGTCGCTGC
ATAAATGAGCAGCAAGTGGACGCACAGGAGGAGCCCGCCTACTGCATTGA
TCTGCTGTTGGCAGCTGGAAACTTCATAAACCGTGCCATAGTCACGTTTG
GTCTATCAGAGTTGCAGGATAAAGAATCGTTGCAAGAAAAGGTTTCCTTT
ACGGATCATAGCATTGATCCCAATTTGCTTGTGAATGATGTGATAAACGT
TCGGGGAAGAATGCGGGAAAGGGCCACCTCCGGAAATGTTAAGAACCCGC
AGCTTTTAGCCGCCTGTGATGAACTGAGGAGCTTGTTACAACAGCACGGC
ATTCAGGTCCGCGACCACAAACAGGGCAGCTCCTGGGTGTTTGCCGTGTC
CTGTGAAAAGCAAGATGATAAAAGCAAAAGCTCTGCCGAAGCAAGCTTTC
TAGACCAT
BO08225.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:30:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8257-RB | 1677 | CG8257-PB | 1..1674 | 17..1690 | 8370 | 100 | Plus |
| CG8257-RA | 1677 | CG8257-PA | 1..1674 | 17..1690 | 8370 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:30:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8257-RB | 2108 | CG8257-RB | 102..1775 | 17..1690 | 8370 | 100 | Plus |
| CG8257-RA | 1813 | CG8257-RA | 102..1775 | 17..1690 | 8370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:30:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14159429..14161091 | 1690..28 | 8315 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:30:49 has no hits.
BO08225.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:01:05 Download gff for
BO08225.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 1..1677 | 17..1694 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:19:35 Download gff for
BO08225.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 67..1748 | 17..1698 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:26:04 Download gff for
BO08225.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 102..1775 | 17..1692 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:01:06 Download gff for
BO08225.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 67..1748 | 17..1698 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:33:12 Download gff for
BO08225.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8257-RA | 102..1775 | 17..1692 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:33:12 Download gff for
BO08225.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14159427..14161091 | 28..1692 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:26:04 Download gff for
BO08225.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10046932..10048596 | 28..1692 | 99 | | Minus |
BO08225.pep Sequence
Translation from 16 to 1708
> BO08225.pep
MYSLKEGLRALNSRTRPALICRRNISEEAPKQDSPFKWRKPIGQHTGINI
YNHGLRQKVPLILRNPQMVTWYTCGPTVYDSAHLGHASTYVKVDILQRIL
RDYFKINLVTAMNITDVDDKIIKRAQLAGLDWQKMARAYEAEFRQDMLRL
NVQAPDVRSHVTTTMPVIIQFIQQLIDGKQAYVTPDNSVYFDVSKSKNYG
KLQNLGLSEDKLDPIKRNTADFALWKARKSGSEPTWAAPWGGEGRPGWHI
ECSAIAGLFFGRQLDIHAGGLDLRFPHHENEEAQCCARYKTDQWVNYWVH
TGQLHMVGDREKMSKSLGNTISVSELLKKYTADEFRMACLLSNYRNAMPY
SDQLMVTARQTLQRFRNFQADLSAYTQFLKPVHLLDEGALKAQLTHTVTE
FDNCLRDDFDTARAISVLIDQMSSISRCINEQQVDAQEEPAYCIDLLLAA
GNFINRAIVTFGLSELQDKESLQEKVSFTDHSIDPNLLVNDVINVRGRMR
ERATSGNVKNPQLLAACDELRSLLQQHGIQVRDHKQGSSWVFAVSCEKQD
DKSKSSAEASFLDH
BO08225.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:45:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8257-PB | 558 | CG8257-PB | 1..558 | 1..558 | 2933 | 100 | Plus |
| CG8257-PA | 558 | CG8257-PA | 1..558 | 1..558 | 2933 | 100 | Plus |
| Aats-cys-PA | 741 | CG8431-PA | 204..655 | 132..559 | 542 | 33.8 | Plus |
| Aats-cys-PA | 741 | CG8431-PA | 20..98 | 48..126 | 237 | 53.2 | Plus |
