Clone BO08226 Report

Search the DGRC for BO08226

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:82
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG10137-RA
Protein status:BO08226.pep: validated full length
Sequenced Size:2857

Clone Sequence Records

BO08226.3prime Sequence

971 bp (811 high quality bases) assembled on 2006-01-06

> BO08226.3prime
ATGGTCTAGAAAGCTTGCATTTGACTTCTTGAGATTCCTCTTGCGTATAT
TCCCGGGACAGCCGCCGGCGCTGAGGAGATGCAATTTCCAGCCGCCGTCT
TGGGGAAGGTGAACATCGTCATGACAAAGGGGACATCGAGCAGCACCCGT
TTTCAGTTCCCGACAATAGTCCTCCATCTGATGTAGTTCATATAGCTGCT
TGTGCACCGATTCAGTGCAACGGACACAGACCACGTAGCTCTCCTTGGCA
TCGCATTCCGTTGTCAGGTGGTAGTTCAGAGCAGCAACCTCCAGCACTTG
ACTGCATTGTGGGCACTTGGTGAGGAAAGGACACGCCTTCCAGTAGTGTC
GGTCCAACTGAGTAGCGTCACTGCCGGCACACGACCAGTCGCAAAAGGGG
CAACGTATTTTGGGTGTGTTGTCTTCAGTGGACTCCGAGTTGGAAGCGGA
TCCCTTGCGCGAGTTGCTCACGGATAGCATGGAGCGCTTGAGCTGCTCGT
TGTACTGCTGCTTTCCATTGCAGCTGGCATATCCATTACTGGAGCTGGCC
ATTGGGCCTAGGTTATGACCACTGCGGCTATTCATCAGTCGAGAGGCATC
TGAGCTGGTGGACGCCTTATCCGCCGGCGGTGTTGCCGCATCGCCCGAGC
TGTGACCCCCGCCATACTTGCTAGCCTCCAGCAGCTCCTGCTTGCGGTCC
AGATCCAACTTGTCAAATTCGGTGAAGAGTTGGCGGTACAAGAGATTGCG
ACGCGTGATGTCGTCATCCGGAGGTAACTGCTTGCGCACCAGTCGGGGAT
TCACCTTGTAGACGAGCAGCANGATGCGCTCGGCCACCTTTCGCACAGGC
TCCGCTGGATGATGGATGCCGGAGCAGCCGCACTCGGACAATGCCCTGCA
NGTGAGTCCACTATGCTTGTCCGTGCTAATGCCCTGAGTGTTGACCAGCT
GCTCCAGCATCTGCAGCCGAC

BO08226.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:19:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG10137-PA 2826 CG10137-RA 1871..2823 971..19 4727 99.7 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-04 20:37:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG10137-RA 3227 CG10137-RA 1957..2909 971..19 4743 99.8 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-04 20:37:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19531546..19532110 971..407 2803 99.6 Minus
2L 23513712 2L 19532167..19532312 406..261 730 100 Minus
2L 23513712 2L 19532527..19532667 159..19 705 100 Minus
U 3151297 U 2744806..2744946 159..19 705 100 Minus
2L 23513712 2L 19532366..19532467 260..159 510 100 Minus
U 3151297 U 2744707..2744746 198..159 200 100 Minus
Blast to na_te.dros performed on 2015-02-04 20:37:37 has no hits.

BO08226.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:41:29 Download gff for BO08226.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10137-PA 1871..2826 18..971 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:33:22 Download gff for BO08226.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10137-PA 1871..2826 18..971 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-10 21:28:10 Download gff for BO08226.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 1957..2917 13..971 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-04 21:52:36 Download gff for BO08226.3prime
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 1957..2917 13..971 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-04 21:52:36 Download gff for BO08226.3prime
Subject Subject Range Query Range Percent Splice Strand
2L 19531546..19532110 407..971 99 -> Minus
2L 19532167..19532312 261..406 100 -> Minus
2L 19532366..19532467 159..260 100 -> Minus
2L 19532528..19532675 13..158 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-10 21:28:10 Download gff for BO08226.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19531546..19532110 407..971 99 -> Minus
arm_2L 19532167..19532312 261..406 100 -> Minus
arm_2L 19532366..19532467 159..260 100 -> Minus
arm_2L 19532528..19532675 13..158 97   Minus

BO08226.5prime Sequence

874 bp (817 high quality bases) assembled on 2006-01-06

> BO08226.5prime
GAAGTTATCAGTCGACATGGCTAAGAAAATACCTTTTAACGTGGTGTTCG
CCTCAGACGAGGATGTTAACTTTCCGGCTAGCGAGTTAAACAATCACGGC
CCCACAGTTCACGGATGGCGAAGTGCTCCGAACGGCAGCCTCACCTCACA
TGACATCATCCTCCGATTCCAGCAGCCGGCCAAGATCTATCGCATCCAGC
TCCTGGCACACCAGTATCTTATACCTGAGAAAGTAGAACTCTGGCTGCAC
TACTCGCCCAAATCCCTGCCCAGCACTCCATCCTCGCAGTACTTTGACTT
TTTGGGTTTTGTTGCCCTGGCGGATAATGCCAACACGAACTACAAGTCTC
GGGAGCTGCAGAGCGTAACCGTGTGTCCACGTAGGGGCACACATCTTAAG
CTGCGTCTGATTGGCGTCCAAGGAAACGACTACAATGACACAGGCCAGAT
TTCCCTACTAGCGGTAAATGTCCTGGGCGAGGATCTGGAAGTGGGGCCAA
ATAATGGCAACGGAGAGGAGCACTTGGCCAACGAGGCCCCACCGTTGGAC
ACGGCCACCGGAGAACTGGCCCTGGCCTCCGTCTGTGATGACCTGCTTTT
CTCCATGTATGTGGAGGAGTCAATAGTGCAGACCATCCGAGAGTTGGAAC
AGCGAAAGATTTTGGCCGTTAACTCAGAAAGATTCGAGTACGCCCGCAAA
CTGAAGCTATGCATGACAGCTTTAAGGACTGCCGGAGAACGTTTGGGGCG
CTATGCTCTGGCCAAGAGGCAGGCTGTTCAGCAGGAGGACTTTACCACGG
CCAGGCTACGCAAGGAGCAGATCGAGATGTACCGGGCGGCAGTACTTCGA
CAATTGCAGGTGCATCAGCTTCTG

BO08226.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:19:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG10137-PA 2826 CG10137-RA 1..858 17..874 4290 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:04:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG10137-RA 3227 CG10137-RA 81..944 11..874 4305 99.9 Plus
CG10165-RD 1440 CG10165-RD 366..537 224..53 860 100 Minus
CG10165-RB 1342 CG10165-RB 268..439 224..53 860 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:04:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19529094..19529743 225..874 3250 100 Plus
2L 23513712 2L 19528774..19528945 53..224 860 100 Plus
2L 23513712 2L 19526766..19526811 11..56 215 97.8 Plus
Blast to na_te.dros performed on 2015-02-11 18:04:07 has no hits.

BO08226.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:41:30 Download gff for BO08226.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10137-PA 1..858 17..874 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:33:23 Download gff for BO08226.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10137-PA 1..858 17..874 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:46:21 Download gff for BO08226.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 81..944 11..874 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:47:55 Download gff for BO08226.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 81..944 11..874 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:47:55 Download gff for BO08226.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19526766..19526811 11..56 97 -> Plus
2L 19528778..19528945 57..224 100 -> Plus
2L 19529094..19529743 225..874 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:46:21 Download gff for BO08226.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19526766..19526811 11..56 97 -> Plus
arm_2L 19528778..19528945 57..224 100 -> Plus
arm_2L 19529094..19529743 225..874 100   Plus

BO08226.complete Sequence

2857 bp (2857 high quality bases) assembled on 2006-08-17

GenBank Submission: FJ631106

> BO08226.complete
GAAGTTATCAGTCGACATGGCTAAGAAAATACCTTTTAACGTGGTGTTCG
CCTCAGACGAGGATGTTAACTTTCCGGCTAGCGAGTTAAACAATCACGGC
CCCACAGTTCACGGATGGCGAAGTGCTCCGAACGGCAGCCTCACCTCACA
TGACATCATCCTCCGATTCCAGCAGCCGGCCAAGATCTATCGCATCCAGC
TCCTGGCACACCAGTATCTTATACCTGAGAAAGTAGAACTCTGGCTGCAC
TACTCGCCCAAATCCCTGCCCAGCACTCCATCCTCGCAGTACTTTGACTT
TTTGGGTTTTGTTGCCCTGGCGGATAATGCCAACACGAACTACAAGTCTC
GGGAGCTGCAGAGCGTAACCGTGTGTCCACGTAGGGGCACACATCTTAAG
CTGCGTCTGATTGGCGTCCAAGGAAACGACTACAATGACACAGGCCAGAT
TTCCCTACTAGCGGTAAATGTCCTGGGCGAGGATCTGGAAGTGGGGCCAA
ATAATGGCAACGGAGAGGAGCACTTGGCCAACGAGGCCCCACCGTTGGAC
ACGGCCACCGGAGAACTGGCCCTGGCCTCCGTCTGTGATGACCTGCTTTT
CTCCATGTATGTGGAGGAGTCAATAGTGCAGACCATCCGAGAGTTGGAAC
AGCGAAAGATTTTGGCCGTTAACTCAGAAAGATTCGAGTACGCCCGCAAA
CTGAAGCTATGCATGACAGCTTTAAGGACTGCCGGAGAACGTTTGGGGCG
CTATGCTCTGGCCAAGAGGCAGGCTGTTCAGCAGGAGGACTTTACCACGG
CCAGGCTACGCAAGGAGCAGATCGAGATGTACCGGGCGGCAGTACTTCGA
CAATTGCAGGTGCATCAGCTTCTGGAACCGCAGGGTGTGACCTTAAGCTC
CAATGACCAAAGCTGCGAGATCTATGCGGGTGGGAAGCCCAGTCTGCCAT
CGGCTCCTAGCCTGCAGGATGTGGCACAGGCACTTGCGGAAGCCACCTTC
AGTCCCAAGAGCATGACGAGTCTCAGCTTAGAGGACAAATCCTCGACCGA
TGGCTCCCAGCCTGGTAACGACAATACGTTGACAGCTCCGGCACCTGCTC
CAGCACCCGCTCCTGCGCCCACCTCTTTGCAGGCCACGCCCACTCCCACG
CTGGGGGGCTGGCGCAAGTCCCACGACGAGCTGCCGCAGTCGCCACGTCT
GCCTTCAAGGCACAGCTCACCAATGTCCAGCCGACAGGGATCGCTGCGCA
GGCGCAACAAGAGCGTTCCACGAAACTCCTACGAAGACTACGAGGAGCGG
GCCATTCCCACGCTGCGACAGGAGTGCCAAGGCAACGCGCTACTGGAAGC
GGATCCGAACCGTGGGCGTTCGCGCCTGAACGACCGCGAGCGTCGCCAGG
CAGCGCTTCCCATCCTGGTCTTCGGCAATGAGCTGGTGGAGCAGTTCTAT
TCGCGTCAGTTTCAGGACCGCGAGGATGGCTTGATGCGTCTGCGTAACTT
CCTAAAGGAGCACGACCTGTTAGAGGCGTCGAGCAACGAGCACGCTGCCA
GTCCCAACAAAGTGGCCCGCAGCGCCGCCCTTCTGCTGCATCGCGCTGTA
AGAGATGCCGTTTACTCCGTGTTTAGCCAAGCTACTGAGACGGTACGCAT
GCTGTTCCTAGAGTATGTGCCCGGTCGAGTTTCCCCCAACGAGGTGGCAC
GTTGCGTGGACCGCCTGCTGCCCGAATTGCTGGCCAAGTCCGGCGATCCA
TCTGCTCGATTGCACACTCTGGCCCAGCACACGATCCTAAGCATCGCCGC
CTGTCCGGAGGTGGCGGAGCAGCACCTGGTTGCGCCAGCACTATCACGAA
GCGTTGGATCCGGAACCCACCAGCGACTGGCAATGAGTCGGCTGCAGATG
CTGGAGCAGCTGGTCAACACTCAGGGCATTAGCACGGACAAGCATAGTGG
ACTCACCTGCAGGGCATTGTCCGAGTGCGGCTGCTCCGGCATCCATCATC
CAGCGGAGCCTGTGCGAAAGGTGGCCGAGCGCATCCTGCTGCTCGTCTAC
AAGGTGAATCCCCGACTGGTGCGCAAGCAGTTACCTCCGGATGACGACAT
CACGCGTCGCAATCTCTTGTACCGCCAACTCTTCACCGAATTTGACAAGT
TGGATCTGGACCGCAAGCAGGAGCTGCTGGAGGCTAGCAAGTATGGCGGG
GGTCACAGCTCGGGCGATGCGGCAACACCGCCGGCGGATAAGGCGTCCAC
CAGCTCAGATGCCTCTCGACTGATGAATAGCCGCAGTGGTCATAACCTAG
GCCCAATGGCCAGCTCCAGTAATGGATATGCCAGCTGCAATGGAAAGCAG
CAGTACAACGAGCAGCTCAAGCGCTCCATGCTATCCGTGAGCAACTCGCG
CAAGGGATCCGCTTCCAACTCGGAGTCCACTGAAGACAACACACCCAAAA
TACGTTGCCCCTTTTGCGACTGGTCGTGTGCCGGCAGTGACGCTACTCAG
TTGGACCGACACTACTGGAAGGCGTGTCCTTTCCTCACCAAGTGCCCACA
ATGCAGTCAAGTGCTGGAGGTTGCTGCTCTGAACTACCACCTGACAACGG
AATGCGATGCCAAGGAGAGCTACGTGGTCTGTGTCCGTTGCACTGAATCG
GTGCACAAGCAGCTATATGAACTACATCAGATGGAGGACTATTGTCGGGA
ACTGAAAACGGGTGCTGCTCGATGTCCCCTTTGTCATGACGATGTTCACC
TTCCCCAAGACGGCGGCTGGAAATTGCATCTCCTCAGCGCCGGCGGCTGT
CCCGGGAATATACGCAAGAGGAATCTCAAGAAGTCAAATGCAAGCTTTCT
AGACCAT

BO08226.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:20:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG10137-RA 2826 CG10137-PA 1..2823 17..2839 14115 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:20:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG10137-RA 3227 CG10137-RA 81..2909 11..2839 14130 100 Plus
CG10165-RD 1440 CG10165-RD 116..316 1321..1121 1005 100 Minus
CG10165-RD 1440 CG10165-RD 366..537 224..53 860 100 Minus
CG10165-RB 1342 CG10165-RB 268..439 224..53 860 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19529094..19530190 225..1321 5485 100 Plus
2L 23513712 2L 19531094..19532110 1435..2451 5085 100 Plus
2L 23513712 2L 19528774..19528945 53..224 860 100 Plus
2L 23513712 2L 19532167..19532312 2452..2597 730 100 Plus
2L 23513712 2L 19532527..19532667 2699..2839 705 100 Plus
U 3151297 U 2744806..2744946 2699..2839 705 100 Plus
2L 23513712 2L 19530914..19531031 1321..1438 590 100 Plus
2L 23513712 2L 19532366..19532467 2598..2699 510 100 Plus
2L 23513712 2L 19526766..19526811 11..56 215 97.8 Plus
U 3151297 U 2744707..2744746 2660..2699 200 100 Plus
Blast to na_te.dros performed on 2014-11-28 00:20:19 has no hits.

BO08226.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:00:44 Download gff for BO08226.complete
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 1..2826 17..2840 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:19:05 Download gff for BO08226.complete
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 81..2917 11..2845 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:22:40 Download gff for BO08226.complete
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 87..2909 17..2841 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:00:45 Download gff for BO08226.complete
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 81..2917 11..2845 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:30:09 Download gff for BO08226.complete
Subject Subject Range Query Range Percent Splice Strand
CG10137-RA 87..2909 17..2841 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:30:09 Download gff for BO08226.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19526772..19526811 17..56 100 -> Plus
2L 19528778..19528945 57..224 100 -> Plus
2L 19529094..19530189 225..1320 100 -> Plus
2L 19530914..19531028 1321..1435 100 -> Plus
2L 19531095..19532110 1436..2451 100 -> Plus
2L 19532167..19532312 2452..2597 100 -> Plus
2L 19532366..19532467 2598..2699 100 -> Plus
2L 19532528..19532667 2700..2841 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:22:40 Download gff for BO08226.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19532366..19532467 2598..2699 100 -> Plus
arm_2L 19526772..19526811 17..56 100 -> Plus
arm_2L 19528778..19528945 57..224 100 -> Plus
arm_2L 19529094..19530189 225..1320 100 -> Plus
arm_2L 19530914..19531028 1321..1435 100 -> Plus
arm_2L 19531095..19532110 1436..2451 100 -> Plus
arm_2L 19532167..19532312 2452..2597 100 -> Plus
arm_2L 19532528..19532667 2700..2841 98   Plus

BO08226.pep Sequence

Translation from 16 to 2857

> BO08226.pep
MAKKIPFNVVFASDEDVNFPASELNNHGPTVHGWRSAPNGSLTSHDIILR
FQQPAKIYRIQLLAHQYLIPEKVELWLHYSPKSLPSTPSSQYFDFLGFVA
LADNANTNYKSRELQSVTVCPRRGTHLKLRLIGVQGNDYNDTGQISLLAV
NVLGEDLEVGPNNGNGEEHLANEAPPLDTATGELALASVCDDLLFSMYVE
ESIVQTIRELEQRKILAVNSERFEYARKLKLCMTALRTAGERLGRYALAK
RQAVQQEDFTTARLRKEQIEMYRAAVLRQLQVHQLLEPQGVTLSSNDQSC
EIYAGGKPSLPSAPSLQDVAQALAEATFSPKSMTSLSLEDKSSTDGSQPG
NDNTLTAPAPAPAPAPAPTSLQATPTPTLGGWRKSHDELPQSPRLPSRHS
SPMSSRQGSLRRRNKSVPRNSYEDYEERAIPTLRQECQGNALLEADPNRG
RSRLNDRERRQAALPILVFGNELVEQFYSRQFQDREDGLMRLRNFLKEHD
LLEASSNEHAASPNKVARSAALLLHRAVRDAVYSVFSQATETVRMLFLEY
VPGRVSPNEVARCVDRLLPELLAKSGDPSARLHTLAQHTILSIAACPEVA
EQHLVAPALSRSVGSGTHQRLAMSRLQMLEQLVNTQGISTDKHSGLTCRA
LSECGCSGIHHPAEPVRKVAERILLLVYKVNPRLVRKQLPPDDDITRRNL
LYRQLFTEFDKLDLDRKQELLEASKYGGGHSSGDAATPPADKASTSSDAS
RLMNSRSGHNLGPMASSSNGYASCNGKQQYNEQLKRSMLSVSNSRKGSAS
NSESTEDNTPKIRCPFCDWSCAGSDATQLDRHYWKACPFLTKCPQCSQVL
EVAALNYHLTTECDAKESYVVCVRCTESVHKQLYELHQMEDYCRELKTGA
ARCPLCHDDVHLPQDGGWKLHLLSAGGCPGNIRKRNLKKSNASFLDH

BO08226.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 21:05:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG10137-PA 941 CG10137-PA 1..941 1..941 4896 100 Plus