Clone Sequence Records
BO08244.3prime Sequence
956 bp (804 high quality bases) assembled on 2006-01-06
> BO08244.3prime
ATGGTCTAGAAAGCTTGCGATTTCATGTTTTTCCAGCAGCGGAAGATTGC
AGGTTGTGGTGCGATTCTGTGGATCCTGGAGACCATTGACTTCGTTGACA
AGATTTTGAGCCTGCGCAAGTTGTTTGCTCCGATGGGTGCGATATAACCA
GGTCGCCGAAACAAGTAAGGCGACCAGCAATATGGCTGCGCACACAGCTA
CTACTACTACGACTACCATTGGGTAATCTCGGACTGCTTCCAGCTTTTTC
TGATTCAGCTCCAGTTTGCCCACGATCGCCAGGAGTTGATTAAATGATTC
CAAGGTCACGGATTCCTGGGAAGATTTTGGTTCCTTCTGCAGCGTTGCGT
AACCTGCTTTCGAAGGAACTCTTTCCCGGACTTCTCCACGGAGGGCGACA
GCTGGACTGCGCACGGCACAGTCGCTTTGAATGCTCAGGATTCCACTGCC
ATTCAATTGGAGCTCCTGCCTCTCACCGGAGCACACTCCTATTAAAGTTA
GCTCATTGGTAAGGGCCACCATCCAGGAGTTTGGTGCCACCATCTCTGTC
CACAGACTCTTCTCCTTCACTTGACGCAAGGTGCAGACTTCGGAAGACTG
GTTCCGTATGGCCGCCAGGGAGCAGGCAAAACTGTCATCCCCAGTCCCGT
AGATAATGCGGTTGCGCCTGCAGATGAACCTTTCTTCGCCCAACTTGATG
CAGTCGTCCAAGCTCTGAAGCGGAAAATACCTGTCCATATGATCGTTGAT
GCCCAGATAAGGTGTTTCGGTGTCCACCAGTTGGATTACGCCATTGTTTA
ACCGTGGAATGGGCGTCAATCGGTAGATATTAAACTTCTCCGCATCGAGC
AAGGGCACTGTGATTTGGACTCCACGTGGGTGCCCCGCTGCCGAGGACTA
CGGAGGCGAGAGGTAAATATTCCGGATGGTATATCGGCCATCCAGATCTC
CCAGAA
BO08244.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:20:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4715-PA | 1596 | Iris-RA | 743..1593 | 869..19 | 4255 | 100 | Minus |
| CG4715-PA | 1596 | Iris-RA | 653..698 | 956..911 | 205 | 97.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:09:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Iris-RA | 1767 | CG4715-RA | 678..1618 | 956..19 | 4600 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:09:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1132481..1133421 | 19..956 | 4525 | 99.5 | Plus |
Blast to na_te.dros performed on 2015-02-11 22:09:28 has no hits.
BO08244.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:41:58 Download gff for
BO08244.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iris-PA | 655..1596 | 15..954 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:34:05 Download gff for
BO08244.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4715-PA | 655..1596 | 15..954 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:47:54 Download gff for
BO08244.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iris-RA | 678..1621 | 15..956 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:47:56 Download gff for
BO08244.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iris-RA | 678..1621 | 15..956 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:47:56 Download gff for
BO08244.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1132477..1133421 | 15..956 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:47:54 Download gff for
BO08244.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1132477..1133421 | 15..956 | 99 | | Plus |
BO08244.5prime Sequence
915 bp (892 high quality bases) assembled on 2006-01-06
> BO08244.5prime
GAAGTTATCAGTCGACATGAAAGCGATTAGTTTGGTATTCATCCTCGCCC
CCTCGCTGATAGCGCTCTCCCATGGAAGCCCAGTTGATCGGGAGGCGATC
GGAGGTCCGATGGCGATGCGGGGATTCAACAACAGTCTGGGCACCTTCGT
GGAGTACAGCGGTCAGGCATCGCTAGCCTCCAGAGATTGGAAGTTATGTG
CCAGCTTCAACTTGGAGTCGCTTTATACGGCAATACGTGCGTTCAATGGT
GTCTACAAGGCTTTGGTCGATGTGTGCGATATCCAAAGGAATCTTTGTCC
AGAAATTCTGGACATTACCAAGTTTGCGGATAGTATTCTTCACGATGGAC
TAATTGACTTGGAGAAAGCGTTGGACTTTAGGGCCGGACGACTTTCTTTG
GGAGATGACGACGTGTCCATCGAGCTTGGGATGGGAACATCCTGCATTGA
CAGCTCCATTAATGTTATAAATGTGATACTTCAAGAACCCTTTCACGAGG
CTTATGAACCTGAAAACCTGATTATGATGAAGCCGTATCTATACCTTATG
GGCAGCAGACTAAAAAGTGCCCAGAATGCCATAACTGAAGCCATAATCTC
TGCCCACCACGGAAAGCTTAGTCCTCTTGTCCTTTCAATGAAACAGCTGC
AAGCGAAGATGCCGCCAATTCTGGGAGATCTGGATGGCCGATATACAATC
CGGAATATTTACCTTCTCGCCTCCGTAGTTCCTCGGCAGCGGGGCAACCA
CGTGGAGTTCCAAATCACAGTGCCCTTGCTCGATGCGGAGAAGTTTAATA
TCTACCGATTGACGCCCATTCCACGGTTAAAACATGGCGTAATCCAACTG
GTGGACACCGAAACACCTTATCTGGGCATCAACGATCATATGGACAGGTA
TTTTCCGCTTCAGAG
BO08244.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:20:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4715-PA | 1596 | Iris-RA | 1..899 | 17..915 | 4445 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 22:09:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Iris-RA | 1767 | CG4715-RA | 26..924 | 17..915 | 4465 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 22:09:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1133175..1134073 | 915..17 | 4465 | 99.8 | Minus |
Blast to na_te.dros performed on 2015-02-11 22:09:36 has no hits.
BO08244.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:41:59 Download gff for
BO08244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iris-PA | 1..899 | 17..915 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:34:06 Download gff for
BO08244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4715-PA | 1..899 | 17..915 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-28 02:47:56 Download gff for
BO08244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iris-RA | 18..924 | 10..915 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-12 00:48:20 Download gff for
BO08244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iris-RA | 18..924 | 10..915 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-12 00:48:20 Download gff for
BO08244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1133175..1134081 | 10..915 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-28 02:47:56 Download gff for
BO08244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1133175..1134081 | 10..915 | 99 | | Minus |
BO08244.complete Sequence
1627 bp (1627 high quality bases) assembled on 2006-01-10
GenBank Submission: FJ631117
> BO08244.complete
GAAGTTATCAGTCGACATGAAAGCGATTAGTTTGGTATTCATCCTCGCCC
CCTCGCTGATAGCGCTCTCCCATGGAAGCCCAGTTGATCGGGAGGCGATC
GGAGGTCCGATGGCGATGCGGGGATTCAACAACAGTCTGGGCACCTTCGT
GGAGTACAGCGGTCAGGCATCGCTAGCCTCCAGAGATTGGAAGTTATGTG
CCAGCTTCAACTTGGAGTCGCTTTATACGGCAATACGTGCGTTCAATGGT
GTCTACAAGGCTTTGGTCGATGTGTGCGATATCCAAAGGAATCTTTGTCC
AGAAATTCTGGACATTACCAAGTTTGCGGATAGTATTCTTCACGATGGAC
TAATTGACTTGGAGAAAGCGTTGGACTTTAGGGCCGGACGACTTTCTTTG
GGAGATGACGACGTGTCCATCGAGCTTGGGATGGGAACATCCTGCATTGA
CAGCTCCATTAATGTTATAAATGTGATACTTCAAGAACCCTTTCACGAGG
CTTATGAACCTGAAAACCTGATTATGATGAAGCCGTATCTATACCTTATG
GGCAGCAGACTAAAAAGTGCCCAGAATGCCATAACTGAAGCCATAATCTC
TGCCCACCACGGAAAGCTTAGTCCTCTTGTCCTTTCAATGAAACAGCTGC
AAGCGAAGATGCCGCCAATTCTGGGAGATCTGGATGGCCGATATACAATC
CGGAATATTTACCTTCTCGCCTCCGTAGTTCCTCGGCAGCGGGGCAACCA
CGTGGAGTTCCAAATCACAGTGCCCTTGCTCGATGCGGAGAAGTTTAATA
TCTACCGATTGACGCCCATTCCACGGTTAAACAATGGCGTAATCCAACTG
GTGGACACCGAAACACCTTATCTGGGCATCAACGATCATATGGACAGGTA
TTTTCCGCTTCAGAGCTTGGACGACTGCATCAAGTTGGGCGAAGAAAGGT
TCATCTGCAGGCGCAACCGCATTATCTACGGGACTGGGGATGACAGTTTT
GCCTGCTCCCTGGCGGCCATACGGAACCAGTCTTCCGAAGTCTGCACCTT
GCGTCAAGTGAAGGAGAAGAGTCTGTGGACAGAGATGGTGGCACCAAACT
CCTGGATGGTGGCCCTTACCAATGAGCTAACTTTAATAGGAGTGTGCTCC
GGTGAGAGGCAGGAGCTCCAATTGAATGGCAGTGGAATCCTGAGCATTCA
AAGCGACTGTGCCGTGCGCAGTCCAGCTGTCGCCCTCCGTGGAGAAGTCC
GGGAAAGAGTTCCTTCGAAAGCAGGTTACGCAACGCTGCAGAAGGAACCA
AAATCTTCCCAGGAATCCGTGACCTTGGAATCATTTAATCAACTCCTGGC
GATCGTGGGCAAACTGGAGCTGAATCAGAAAAAGCTGGAAGCAGTCCGAG
ATTACCCAATGGTAGTCGTAGTAGTAGTAGCTGTGTGCGCAGCCATATTG
CTGGTCGCCTTACTTGTTTCGGCGACCTGGTTATATCGCACCCATCGGAG
CAAACAACTTGCGCAGGCTCAAAATCTTGTCAACGAAGTCAATGGTCTCC
AGGATCCACAGAATCGCACCACAACCTGCAATCTTCCGCTGCTGGAAAAA
CATGAAATCGCAAGCTTTCTAGACCAT
BO08244.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:44:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Iris-RA | 1596 | CG4715-PA | 1..1593 | 17..1609 | 7965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:44:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Iris-RA | 1767 | CG4715-RA | 26..1618 | 17..1609 | 7965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:44:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1132481..1134073 | 1609..17 | 7965 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:44:54 has no hits.
BO08244.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:10:53 Download gff for
BO08244.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iris-RA | 1..1596 | 17..1613 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 06:31:33 Download gff for
BO08244.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iris-RA | 40..1643 | 10..1613 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:52:43 Download gff for
BO08244.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iris-RA | 26..1618 | 17..1611 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:10:53 Download gff for
BO08244.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iris-RA | 40..1643 | 10..1613 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:53:13 Download gff for
BO08244.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iris-RA | 26..1618 | 17..1611 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:53:13 Download gff for
BO08244.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1132479..1134073 | 17..1611 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:52:43 Download gff for
BO08244.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1132479..1134073 | 17..1611 | 99 | | Minus |
BO08244.pep Sequence
Translation from 16 to 1627
> BO08244.pep
MKAISLVFILAPSLIALSHGSPVDREAIGGPMAMRGFNNSLGTFVEYSGQ
ASLASRDWKLCASFNLESLYTAIRAFNGVYKALVDVCDIQRNLCPEILDI
TKFADSILHDGLIDLEKALDFRAGRLSLGDDDVSIELGMGTSCIDSSINV
INVILQEPFHEAYEPENLIMMKPYLYLMGSRLKSAQNAITEAIISAHHGK
LSPLVLSMKQLQAKMPPILGDLDGRYTIRNIYLLASVVPRQRGNHVEFQI
TVPLLDAEKFNIYRLTPIPRLNNGVIQLVDTETPYLGINDHMDRYFPLQS
LDDCIKLGEERFICRRNRIIYGTGDDSFACSLAAIRNQSSEVCTLRQVKE
KSLWTEMVAPNSWMVALTNELTLIGVCSGERQELQLNGSGILSIQSDCAV
RSPAVALRGEVRERVPSKAGYATLQKEPKSSQESVTLESFNQLLAIVGKL
ELNQKKLEAVRDYPMVVVVVVAVCAAILLVALLVSATWLYRTHRSKQLAQ
AQNLVNEVNGLQDPQNRTTTCNLPLLEKHEIASFLDH
BO08244.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:19:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Iris-PA | 531 | CG4715-PA | 1..531 | 1..531 | 2699 | 100 | Plus |
