Clone BO08251 Report

Search the DGRC for BO08251

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:82
Well:51
Vector:pDNR-Dual
Associated Gene/TranscriptCG32698-RA
Protein status:BO08251.pep: validated full length
Sequenced Size:1015

Clone Sequence Records

BO08251.3prime Sequence

909 bp (797 high quality bases) assembled on 2006-01-06

> BO08251.3prime
ATGGTCTAGAAAGCTTGCGTTCTGTTTCCAACTGGTCGCTTTATAGTAGA
CCTCGCGGTACATGGTGGGGCAGGCGGCCTTGCCGTTCGACTTCGTCGTC
TTGAAATCAATATTGGTGCGAATGGGCCGGTGCAGGAGCGGCTGGGGCGG
CCGGTAATTGTTGCCCAGGGGCGCTTTCGGGTGGTCTGGACTGCCCTGCA
TCAGGCGGCGCAGGGCGTGCAACTGTTGCTTTGTGATGTAGATGGGCTTG
TTGAGCACCACCCAGGTGACTGTTTCGTGGCAGGCAGGTGCCGTTGTGGA
TCCATCGTAGGTCATATAGTGATCCGTGTCCGGTAGCAGTCCGCGGATGG
AGAGACGCTTAACGAAGGCCTCATCGCCGCCATAGCGAATGCGCTCCAGC
TGATCGGTGAGCATGCGCAGCTCCGCATTCGAGAGATCTCCAAGCTGCAG
CAGAATGGAGACACCGACGATGCCCTGGGCGCGATTGAGGGCATCTGAGA
AATTTGCATACAGCTGGGAATTGTAGCCGAATATTTGTATCTCCGCCGGG
AACGTATAGCCCTCGACACTGTGCTCCGATCCAAATTGGTCGTTCAATCC
GTAGTGCATGTGGATCTCGTGGAAACGGTAGCGATACGACAACGGTCCGC
CCGATATATTCACTGGCGTCTGCATACCGTCGTAGTTGGCCACCGTATCA
TTGCCGGCCGTAAAGATGACGCTGTGGCCCGTATTAGTGATCAATCCGGA
TATCCTGTGCTTGTCTATGTGCATGGGCCTCAAGTTGGGATCAAATAGCA
GGCGTTGGGGTTCCAGATTGACCGGCGATTGGCGACGACCCTTGTTGCAG
AGCGACCACTCCGGATTGATGAGGCCCCAAAAGGCAGGTCCTGAGATGCC
ATCGTATGT

BO08251.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:20:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG32698-PA 984 CG32698-RA 91..981 909..19 4455 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 04:19:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG32698-RD 1775 CG32698-RD 579..1469 909..19 4455 100 Minus
CG32698-RB 2007 CG32698-RB 811..1701 909..19 4455 100 Minus
CG32698-RC 8207 CG32698-RC 788..1678 909..19 4455 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 04:19:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9845957..9846180 446..223 1120 100 Minus
X 23542271 X 9836593..9836806 754..541 1070 100 Minus
X 23542271 X 9848528..9848715 226..39 940 100 Minus
X 23542271 X 9836310..9836450 894..754 705 100 Minus
X 23542271 X 9845699..9845796 542..445 490 100 Minus
Blast to na_te.dros performed on 2015-02-11 04:19:14 has no hits.

BO08251.3prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:42:11 Download gff for BO08251.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32698-PA 91..984 18..909 99   Minus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:34:24 Download gff for BO08251.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32698-PA 91..984 18..909 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-22 20:58:38 Download gff for BO08251.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32698-RA 566..1456 19..909 100   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:45:14 Download gff for BO08251.3prime
Subject Subject Range Query Range Percent Splice Strand
CG32698-RC 788..1678 19..909 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:45:14 Download gff for BO08251.3prime
Subject Subject Range Query Range Percent Splice Strand
X 9845959..9846180 223..444 100 -> Minus
X 9848532..9848715 39..222 100 -> Minus
X 9832524..9832542 891..909 100 -> Minus
X 9836314..9836450 754..890 100 -> Minus
X 9836594..9836806 541..753 100 -> Minus
X 9845701..9845796 445..540 100 -> Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-22 20:58:38 Download gff for BO08251.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9742565..9742748 39..222 100 -> Minus
arm_X 9726557..9726575 891..909 100 -> Minus
arm_X 9730347..9730483 754..890 100 -> Minus
arm_X 9730627..9730839 541..753 100 -> Minus
arm_X 9739734..9739829 445..540 100 -> Minus
arm_X 9739992..9740213 223..444 100 -> Minus

BO08251.5prime Sequence

763 bp (762 high quality bases) assembled on 2006-01-06

> BO08251.5prime
GAAGTTATCAGTCGACATGGAGCTGCTGCAGGCCCTCTGCTGTACGCTGC
TCCTGCTTTTGGCCCGGATGCAAGTTCTGCTTGCCGTCAGTTGGGAGGAT
TGGTGGACATACGATGGCATCTCAGGACCTGCCTTTTGGGGCCTCATCAA
TCCGGAGTGGTCGCTCTGCAACAAGGGTCGTCGCCAATCGCCGGTCAATC
TGGAACCCCAACGCCTGCTATTTGATCCCAACTTGAGGCCCATGCACATA
GACAAGCACAGGATATCCGGATTGATCACTAATACGGGCCACAGCGTCAT
CTTTACGGCCGGCAATGATACGGTGGCCAACTACGACGGTATGCAGACGC
CAGTGAATATATCGGGCGGACCGTTGTCGTATCGCTACCGTTTCCACGAG
ATCCACATGCACTACGGATTGAACGACCAATTTGGATCGGAGCACAGTGT
CGAGGGCTATACGTTCCCGGCGGAGATACAAATATTCGGCTACAATTCCC
AGCTGTATGCAAATTTCTCAGATGCCCTCAATCGCGCCCAGGGCATCGTC
GGTGTCTCCATTCTGCTGCAGCTTGGAGATCTCTCGAATGCGGAGCTGCG
CATGCTCACCGATCAGCTGGAGCGCATTCGCTATGGCGGCGATGAGGCCT
TCGTTAAGCGTCTCTCCATCCGCGGACTGCTACCGGACACGGATCACTAT
ATGACCTACGATGGATCCACAACGGCACCTGCCTGCCACGAAACAGTCAC
CTGGGTGGTGCTC

BO08251.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:20:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG32698-PA 984 CG32698-RA 1..747 17..763 3735 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:08:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG32698-RD 1775 CG32698-RD 489..1235 17..763 3735 100 Plus
CG32698-RB 2007 CG32698-RB 721..1467 17..763 3735 100 Plus
CG32698-RC 8207 CG32698-RC 698..1444 17..763 3735 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:08:48
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9836593..9836806 262..475 1070 100 Plus
X 23542271 X 9845957..9846150 570..763 970 100 Plus
X 23542271 X 9836310..9836450 122..262 705 100 Plus
X 23542271 X 9845699..9845796 474..571 490 100 Plus
X 23542271 X 9812099..9812156 17..74 290 100 Plus
X 23542271 X 9832490..9832543 73..126 270 100 Plus
Blast to na_te.dros performed on 2015-02-11 03:08:51 has no hits.

BO08251.5prime Sim4 Records

Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:42:12 Download gff for BO08251.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32698-PA 1..747 17..763 100   Plus
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:34:26 Download gff for BO08251.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32698-PA 1..747 17..763 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:24:56 Download gff for BO08251.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32698-RA 476..1222 17..763 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:26:32 Download gff for BO08251.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32698-RC 698..1444 17..763 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:26:32 Download gff for BO08251.5prime
Subject Subject Range Query Range Percent Splice Strand
X 9812099..9812156 17..74 100 -> Plus
X 9832492..9832542 75..125 100 -> Plus
X 9836314..9836450 126..262 100 -> Plus
X 9836594..9836806 263..475 100 -> Plus
X 9845701..9845796 476..571 100 -> Plus
X 9845959..9846150 572..763 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:24:56 Download gff for BO08251.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 9706132..9706189 17..74 100 -> Plus
arm_X 9726525..9726575 75..125 100 -> Plus
arm_X 9730347..9730483 126..262 100 -> Plus
arm_X 9730627..9730839 263..475 100 -> Plus
arm_X 9739734..9739829 476..571 100 -> Plus
arm_X 9739992..9740183 572..763 100   Plus

BO08251.complete Sequence

1015 bp (1015 high quality bases) assembled on 2006-01-10

GenBank Submission: FJ631123

> BO08251.complete
GAAGTTATCAGTCGACATGGAGCTGCTGCAGGCCCTCTGCTGTACGCTGC
TCCTGCTTTTGGCCCGGATGCAAGTTCTGCTTGCCGTCAGTTGGGAGGAT
TGGTGGACATACGATGGCATCTCAGGACCTGCCTTTTGGGGCCTCATCAA
TCCGGAGTGGTCGCTCTGCAACAAGGGTCGTCGCCAATCGCCGGTCAATC
TGGAACCCCAACGCCTGCTATTTGATCCCAACTTGAGGCCCATGCACATA
GACAAGCACAGGATATCCGGATTGATCACTAATACGGGCCACAGCGTCAT
CTTTACGGCCGGCAATGATACGGTGGCCAACTACGACGGTATGCAGACGC
CAGTGAATATATCGGGCGGACCGTTGTCGTATCGCTACCGTTTCCACGAG
ATCCACATGCACTACGGATTGAACGACCAATTTGGATCGGAGCACAGTGT
CGAGGGCTATACGTTCCCGGCGGAGATACAAATATTCGGCTACAATTCCC
AGCTGTATGCAAATTTCTCAGATGCCCTCAATCGCGCCCAGGGCATCGTC
GGTGTCTCCATTCTGCTGCAGCTTGGAGATCTCTCGAATGCGGAGCTGCG
CATGCTCACCGATCAGCTGGAGCGCATTCGCTATGGCGGCGATGAGGCCT
TCGTTAAGCGTCTCTCCATCCGCGGACTGCTACCGGACACGGATCACTAT
ATGACCTACGATGGATCCACAACGGCACCTGCCTGCCACGAAACAGTCAC
CTGGGTGGTGCTCAACAAGCCCATCTACATCACAAAGCAACAGTTGCACG
CCCTGCGCCGCCTGATGCAGGGCAGTCCAGACCACCCGAAAGCGCCCCTG
GGCAACAATTACCGGCCGCCCCAGCCGCTCCTGCACCGGCCCATTCGCAC
CAATATTGATTTCAAGACGACGAAGTCGAACGGCAAGGCCGCCTGCCCCA
CCATGTACCGCGAGGTCTACTATAAAGCGACCAGTTGGAAACAGAACGCA
AGCTTTCTAGACCAT

BO08251.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:34:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG32698-RD 984 CG32698-PD 1..981 17..997 4905 100 Plus
CG32698-RB 984 CG32698-PB 1..981 17..997 4905 100 Plus
CG32698-RC 984 CG32698-PC 1..981 17..997 4905 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:34:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG32698-RD 1775 CG32698-RD 489..1469 17..997 4905 100 Plus
CG32698-RB 2007 CG32698-RB 721..1701 17..997 4905 100 Plus
CG32698-RC 8207 CG32698-RC 698..1678 17..997 4905 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:33:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9845957..9846180 570..793 1120 100 Plus
X 23542271 X 9836593..9836806 262..475 1070 100 Plus
X 23542271 X 9848528..9848715 790..977 940 100 Plus
X 23542271 X 9836310..9836450 122..262 705 100 Plus
X 23542271 X 9845699..9845796 474..571 490 100 Plus
X 23542271 X 9812099..9812156 17..74 290 100 Plus
X 23542271 X 9832490..9832543 73..126 270 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:34:00 has no hits.

BO08251.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:11:01 Download gff for BO08251.complete
Subject Subject Range Query Range Percent Splice Strand
CG32698-RA 1..984 17..998 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:56:45 Download gff for BO08251.complete
Subject Subject Range Query Range Percent Splice Strand
CG32698-RA 460..1440 17..999 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:47 Download gff for BO08251.complete
Subject Subject Range Query Range Percent Splice Strand
CG32698-RA 476..1456 17..999 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:11:02 Download gff for BO08251.complete
Subject Subject Range Query Range Percent Splice Strand
CG32698-RA 460..1440 17..997 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:20:38 Download gff for BO08251.complete
Subject Subject Range Query Range Percent Splice Strand
CG32698-RC 698..1678 17..999 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:20:38 Download gff for BO08251.complete
Subject Subject Range Query Range Percent Splice Strand
X 9836594..9836806 263..475 100 -> Plus
X 9845701..9845796 476..571 100 -> Plus
X 9845959..9846180 572..793 100 -> Plus
X 9848532..9848715 794..977 100 -> Plus
X 9812099..9812156 17..74 100 -> Plus
X 9832492..9832542 75..125 100 -> Plus
X 9836314..9836450 126..262 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:47 Download gff for BO08251.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9730627..9730839 263..475 100 -> Plus
arm_X 9739734..9739829 476..571 100 -> Plus
arm_X 9706132..9706189 17..74 100 -> Plus
arm_X 9726525..9726575 75..125 100 -> Plus
arm_X 9730347..9730483 126..262 100 -> Plus
arm_X 9739992..9740213 572..793 100 -> Plus
arm_X 9742565..9742748 794..977 100 -> Plus

BO08251.pep Sequence

Translation from 16 to 1015

> BO08251.pep
MELLQALCCTLLLLLARMQVLLAVSWEDWWTYDGISGPAFWGLINPEWSL
CNKGRRQSPVNLEPQRLLFDPNLRPMHIDKHRISGLITNTGHSVIFTAGN
DTVANYDGMQTPVNISGGPLSYRYRFHEIHMHYGLNDQFGSEHSVEGYTF
PAEIQIFGYNSQLYANFSDALNRAQGIVGVSILLQLGDLSNAELRMLTDQ
LERIRYGGDEAFVKRLSIRGLLPDTDHYMTYDGSTTAPACHETVTWVVLN
KPIYITKQQLHALRRLMQGSPDHPKAPLGNNYRPPQPLLHRPIRTNIDFK
TTKSNGKAACPTMYREVYYKATSWKQNASFLDH

BO08251.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:19:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG32698-PD 327 CG32698-PD 1..327 1..327 1766 100 Plus
CG32698-PB 327 CG32698-PB 1..327 1..327 1766 100 Plus
CG32698-PC 327 CG32698-PC 1..327 1..327 1766 100 Plus
CG32698-PA 327 CG32698-PA 1..327 1..327 1766 100 Plus
CG1402-PC 333 CG1402-PC 18..331 7..331 1027 54.8 Plus