Clone Sequence Records
BO08289.3prime Sequence
882 bp (764 high quality bases) assembled on 2006-01-06
> BO08289.3prime
ATGGTCTAGAAAGCTTGCCAACTCAAAGAAGTCGTCCTGCTGCTTCTCCA
GCCGCTTCAGCGAATTCTGGACTCGTCGCGTCTGCGTCGTGTTCAGCAGG
TGCGCCGTATCCGAGGAGTTCCCGCTGCCCGTCGAGCTGTGGCGCTGATA
CTGCGACGGACGGTCGTTGTTGTTGGTCTTGTAGGAGTTGTTCAGCGGAT
GGCGGCGCTGCGGGAAAACGTCGGCGGTGGCACTGATGCAGATGTCCGCA
TCACTCTGACTGCTGACCAGGTCCTTAGAGCGCTCCACATATTTGCGCGA
CTCAGAAATGGTGTTGTCTATCTTGTTAAGGAAGTCGTTCATGCATTTCC
TGTTCTCCTCCTCGGGCGTCATTGCGGCCACCGAGTCCAGGCTCTTGCTC
TGCTTGCCGCTGCAACCACCGTGGCCGTGCATCATCGATGGATCCTCGTC
GCCGGCCTGCACCACCAGCAGCTCCCCGGCAATGGAGTAGGGACGTTGTG
GGGGCTGTTGCTGCTGCTGCTGTTGGTTGCCGCCGGAACGCGATCCTCCG
GAAATGGGGCCGGTGCCACTTGTGTTGCAGCTGCTGCTGCTCCCACTGCT
GCTGCTGCTACTGCTGCTGCTGATGTCGTTGCTCTTCATGAAGCTCTTGT
TGCTCTGGCTCAGATTATTGGCATTGTTGTGCGCCTCCCGCTGTCCATTG
GCATCCGGAGTGCCCGGTGGCGTGGCCAGCACGGCGTCGAAAGCGGCTAT
CGAATCGCCAGGCACCTGGGGATAGTACGGTGAGTTCTTCTCCACTGGAA
CGAGGAGAAACTGACGCAGGAACAGGCTGTCCGAGGCGAAGAGGCGGTTG
GCCCGTCTTATTTGCTCCGTCGTGCAGCCGTA
BO08289.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:21:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12207-PB | 1101 | CG12207-RB | 235..1098 | 882..19 | 4320 | 100 | Minus |
| CG12207-PC | 1101 | CG12207-RC | 235..1098 | 882..19 | 4320 | 100 | Minus |
| CG12207-PA | 1032 | CG12207-RA | 166..1029 | 882..19 | 4320 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 03:09:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12207-RG | 2535 | CG12207-RG | 876..1739 | 882..19 | 4320 | 100 | Minus |
| CG12207-RF | 2113 | CG12207-RF | 454..1317 | 882..19 | 4320 | 100 | Minus |
| CG12207-RE | 1927 | CG12207-RE | 268..1131 | 882..19 | 4320 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 03:09:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14300419..14301018 | 871..272 | 3000 | 100 | Minus |
| 3R | 32079331 | 3R | 14301228..14301480 | 271..19 | 1265 | 100 | Minus |
Blast to na_te.dros performed 2015-02-11 03:09:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6741..6899 | 660..495 | 319 | 68.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6893 | 658..495 | 275 | 66.5 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6796..6956 | 680..513 | 220 | 61.9 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2300..2449 | 638..483 | 216 | 63.7 | Minus |
| roo | 9092 | roo DM_ROO 9092bp | 1062..1157 | 591..492 | 165 | 67 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6824 | 610..495 | 161 | 64.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6414..6563 | 645..495 | 149 | 58.2 | Minus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 849..1005 | 661..495 | 146 | 58.3 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2450..2661 | 694..492 | 138 | 56.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2394 | 590..495 | 130 | 64.6 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6779 | 535..495 | 120 | 79.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..6800 | 535..495 | 120 | 79.1 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2747..2842 | 581..488 | 115 | 59.4 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2334..2376 | 532..492 | 111 | 76.7 | Minus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6758 | 527..495 | 111 | 81.8 | Minus |
BO08289.3prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:43:12 Download gff for
BO08289.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12207-PB | 236..1101 | 18..881 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:36:03 Download gff for
BO08289.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12207-PA | 167..1032 | 18..881 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 06:25:05 Download gff for
BO08289.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12207-RD | 400..1266 | 13..881 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 05:26:46 Download gff for
BO08289.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12207-RE | 269..1135 | 13..881 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 05:26:46 Download gff for
BO08289.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14301228..14301484 | 13..271 | 98 | | Minus |
| 3R | 14300417..14301018 | 272..874 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 06:25:05 Download gff for
BO08289.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10126139..10126740 | 272..874 | 99 | -> | Minus |
| arm_3R | 10126950..10127206 | 13..271 | 98 | | Minus |
BO08289.5prime Sequence
927 bp (781 high quality bases) assembled on 2006-01-06
> BO08289.5prime
GAAGTTATCAGTCGACATGGATTACATTGTGAAGGCCTACAAGGATTGGA
AACTGCATTCGCAGTTTCAAGAGATCGTCCCCGACATGGATGACTCGGAA
TTCATGTTCAACGAGAAGCAATCGATCCGGGACTCCGGGCGCACCCTCAA
GCGCTACGGGAGCACCTGCTGCAACAGCCTCCGGAACAATGAGACCCTCA
TCCGGCACATCGTCGAGAAGACGGACACGCTGCAGGGCATCGCCCTCAAG
TACGGCTGCACGACGGAGCAAATAAGACGGGCCAACCGCCTCTTCGCCTC
GGACAGCCTGTTCCTGCGTCAGTTTCTCCTCGTTCCAGTGGAGAAGAACT
CACCGTACTATCCCCAGGTGCCTGGCGATTCGATAGCCGCTTTCGACGCC
GTGCTGGCCACGCCACCGGGCACTCCGGATGCCAATGGACAGCGGGAGGC
GCACAACAATGCCAATAATCTGAGCCAGAGCAACAAGAGCTTCATGAAGA
GCAACGACATCAGCAGCAGCAGTAGCAGCAGCAGCAGTGGGAGCAGCAGC
AGCTGCAACACAAGTGGCACCGGCCCCATTTCCGGAGGATCGCGTTCCGG
CGGCAACCAACAGCAGCAGCAGCAACAGCCCCCACAACGTCCCTACTCCA
TTGCCGGGGAGCTGCTGGTGGTGCAGGCCGGCGACGAGGATCCATCGATG
ATGCACGGCCACGGTGGTTGCAGCGGCAAGCAGAGCAAGAGCCTGGACTC
GGTGGCCGCAATGACGCCCGAGGAGGAGAACAGGAAATGCATGAACGACT
TCCTTACAAGATAGACNACACCATTTCTGAGTCGCGCAAATATGTGGAGC
GCTCTANGGACCTGGTCAGCAGTCAGAGTGATGCGGACATCTGCATCAGT
GCCACCGCCGACGTTTTCCGGCAGCGC
BO08289.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-06 13:21:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12207-PB | 1101 | CG12207-RB | 1..790 | 17..806 | 3950 | 100 | Plus |
| CG12207-PC | 1101 | CG12207-RC | 1..790 | 17..806 | 3950 | 100 | Plus |
| CG12207-PA | 1032 | CG12207-RA | 1..721 | 86..806 | 3605 | 100 | Plus |
| CG12207-PB | 1101 | CG12207-RB | 791..912 | 806..927 | 547 | 97.5 | Plus |
| CG12207-PC | 1101 | CG12207-RC | 791..912 | 806..927 | 547 | 97.5 | Plus |
| CG12207-PA | 1032 | CG12207-RA | 722..843 | 806..927 | 547 | 97.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-11 18:08:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12207-RG | 2535 | CG12207-RG | 642..1553 | 17..927 | 4498 | 99.6 | Plus |
| CG12207-RF | 2113 | CG12207-RF | 220..1131 | 17..927 | 4498 | 99.6 | Plus |
| CG12207-RC | 1997 | CG12207-RC | 104..1015 | 17..927 | 4498 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-11 18:08:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14300419..14301018 | 262..860 | 2928 | 99.5 | Plus |
| 3R | 32079331 | 3R | 14298786..14298987 | 61..262 | 1010 | 100 | Plus |
| 3R | 32079331 | 3R | 14301228..14301294 | 861..927 | 320 | 98.5 | Plus |
| 3R | 32079331 | 3R | 14290773..14290820 | 17..64 | 240 | 100 | Plus |
Blast to na_te.dros performed 2015-02-11 18:08:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6741..6899 | 473..638 | 319 | 68.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6893 | 475..638 | 275 | 66.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6796..6956 | 453..620 | 220 | 61.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2300..2449 | 495..650 | 216 | 63.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1062..1157 | 542..641 | 165 | 67 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6824 | 523..638 | 161 | 64.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6414..6563 | 488..638 | 149 | 58.2 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 849..1005 | 472..638 | 146 | 58.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2450..2661 | 439..641 | 138 | 56.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2394 | 543..638 | 130 | 64.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..6800 | 598..638 | 120 | 79.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6779 | 598..638 | 120 | 79.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2747..2842 | 552..645 | 115 | 59.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2334..2376 | 601..641 | 111 | 76.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6758 | 606..638 | 111 | 81.8 | Plus |
BO08289.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-18 03:43:13 Download gff for
BO08289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12207-PB | 1..912 | 17..927 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-10 02:36:04 Download gff for
BO08289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12207-PC | 1..912 | 17..927 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-25 19:46:39 Download gff for
BO08289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12207-RB | 419..1333 | 14..927 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-11 19:41:16 Download gff for
BO08289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12207-RC | 101..1015 | 14..927 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-11 19:41:16 Download gff for
BO08289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14290770..14290820 | 14..64 | 98 | -> | Plus |
| 3R | 14298790..14298987 | 65..262 | 100 | -> | Plus |
| 3R | 14300420..14301018 | 263..860 | 99 | -> | Plus |
| 3R | 14301228..14301294 | 861..927 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-25 19:46:39 Download gff for
BO08289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10116492..10116542 | 14..64 | 98 | -> | Plus |
| arm_3R | 10124512..10124709 | 65..262 | 100 | -> | Plus |
| arm_3R | 10126142..10126740 | 263..860 | 99 | -> | Plus |
| arm_3R | 10126950..10127016 | 861..927 | 98 | | Plus |
BO08289.complete Sequence
1132 bp (1132 high quality bases) assembled on 2006-01-10
GenBank Submission: FJ631138
> BO08289.complete
GAAGTTATCAGTCGACATGGATTACATTGTGAAGGCCTACAAGGATTGGA
AACTGCATTCGCAGTTTCAAGAGATCGTCCCCGACATGGATGACTCGGAA
TTCATGTTCAACGAGAAGCAATCGATCCGGGACTCCGGGCGCACCCTCAA
GCGCTACGGGAGCACCTGCTGCAACAGCCTCCGGAACAATGAGACCCTCA
TCCGGCACATCGTCGAGAAGACGGACACGCTGCAGGGCATCGCCCTCAAG
TACGGCTGCACGACGGAGCAAATAAGACGGGCCAACCGCCTCTTCGCCTC
GGACAGCCTGTTCCTGCGTCAGTTTCTCCTCGTTCCAGTGGAGAAGAACT
CACCGTACTATCCCCAGGTGCCTGGCGATTCGATAGCCGCTTTCGACGCC
GTGCTGGCCACGCCACCGGGCACTCCGGATGCCAATGGACAGCGGGAGGC
GCACAACAATGCCAATAATCTGAGCCAGAGCAACAAGAGCTTCATGAAGA
GCAACGACATCAGCAGCAGCAGTAGCAGCAGCAGCAGTGGGAGCAGCAGC
AGCTGCAACACAAGTGGCACCGGCCCCATTTCCGGAGGATCGCGTTCCGG
CGGCAACCAACAGCAGCAGCAGCAACAGCCCCCACAACGTCCCTACTCCA
TTGCCGGGGAGCTGCTGGTGGTGCAGGCCGGCGACGAGGATCCATCGATG
ATGCACGGCCACGGTGGTTGCAGCGGCAAGCAGAGCAAGAGCCTGGACTC
GGTGGCCGCAATGACGCCCGAGGAGGAGAACAGGAAATGCATGAACGACT
TCCTTAACAAGATAGACAACACCATTTCTGAGTCGCGCAAATATGTGGAG
CGCTCTAAGGACCTGGTCAGCAGTCAGAGTGATGCGGACATCTGCATCAG
TGCCACCGCCGACGTTTTCCCGCAGCGCCGCCATCCGCTGAACAACTCCT
ACAAGACCAACAACAACGACCGTCCGTCGCAGTATCAGCGCCACAGCTCG
ACGGGCAGCGGGAACTCCTCGGATACGGCGCACCTGCTGAACACGACGCA
GACGCGACGAGTCCAGAATTCGCTGAAGCGGCTGGAGAAGCAGCAGGACG
ACTTCTTTGAGTTGGCAAGCTTTCTAGACCAT
BO08289.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:38:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12207-RG | 1101 | CG12207-PG | 1..1098 | 17..1114 | 5490 | 100 | Plus |
| CG12207-RF | 1101 | CG12207-PF | 1..1098 | 17..1114 | 5490 | 100 | Plus |
| CG12207-RC | 1101 | CG12207-PC | 1..1098 | 17..1114 | 5490 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:38:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12207-RG | 2535 | CG12207-RG | 642..1739 | 17..1114 | 5490 | 100 | Plus |
| CG12207-RF | 2113 | CG12207-RF | 220..1317 | 17..1114 | 5490 | 100 | Plus |
| CG12207-RC | 1997 | CG12207-RC | 104..1201 | 17..1114 | 5490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:38:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14300419..14301018 | 262..861 | 3000 | 100 | Plus |
| 3R | 32079331 | 3R | 14301228..14301480 | 862..1114 | 1265 | 100 | Plus |
| 3R | 32079331 | 3R | 14298786..14298987 | 61..262 | 1010 | 100 | Plus |
| 3R | 32079331 | 3R | 14290773..14290820 | 17..64 | 240 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 08:38:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6741..6899 | 473..638 | 319 | 68.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..6893 | 475..638 | 275 | 66.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6796..6956 | 453..620 | 220 | 61.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2300..2449 | 495..650 | 216 | 63.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1062..1157 | 542..641 | 165 | 67 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6824 | 523..638 | 161 | 64.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6414..6563 | 488..638 | 149 | 58.2 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 849..1005 | 472..638 | 146 | 58.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2450..2661 | 439..641 | 138 | 56.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2394 | 543..638 | 130 | 64.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6779 | 598..638 | 120 | 79.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..6800 | 598..638 | 120 | 79.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2334..2376 | 601..641 | 111 | 76.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..6758 | 606..638 | 111 | 81.8 | Plus |
BO08289.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 22:55:21 Download gff for
BO08289.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12207-RC | 1..1101 | 17..1115 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:02:01 Download gff for
BO08289.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12207-RC | 66..1163 | 17..1116 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:55 Download gff for
BO08289.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12207-RB | 422..1519 | 17..1116 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 22:55:21 Download gff for
BO08289.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12207-RC | 63..1167 | 14..1120 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:22:11 Download gff for
BO08289.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12207-RC | 104..1201 | 17..1116 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:22:11 Download gff for
BO08289.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14290773..14290820 | 17..64 | 100 | -> | Plus |
| 3R | 14298790..14298987 | 65..262 | 100 | -> | Plus |
| 3R | 14300420..14301018 | 263..861 | 100 | -> | Plus |
| 3R | 14301228..14301480 | 862..1116 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:55 Download gff for
BO08289.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10116495..10116542 | 17..64 | 100 | -> | Plus |
| arm_3R | 10124512..10124709 | 65..262 | 100 | -> | Plus |
| arm_3R | 10126142..10126740 | 263..861 | 100 | -> | Plus |
| arm_3R | 10126950..10127202 | 862..1116 | 99 | | Plus |
BO08289.pep Sequence
Translation from 16 to 1132
> BO08289.pep
MDYIVKAYKDWKLHSQFQEIVPDMDDSEFMFNEKQSIRDSGRTLKRYGST
CCNSLRNNETLIRHIVEKTDTLQGIALKYGCTTEQIRRANRLFASDSLFL
RQFLLVPVEKNSPYYPQVPGDSIAAFDAVLATPPGTPDANGQREAHNNAN
NLSQSNKSFMKSNDISSSSSSSSSGSSSSCNTSGTGPISGGSRSGGNQQQ
QQQQPPQRPYSIAGELLVVQAGDEDPSMMHGHGGCSGKQSKSLDSVAAMT
PEEENRKCMNDFLNKIDNTISESRKYVERSKDLVSSQSDADICISATADV
FPQRRHPLNNSYKTNNNDRPSQYQRHSSTGSGNSSDTAHLLNTTQTRRVQ
NSLKRLEKQQDDFFELASFLDH
BO08289.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 19:18:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12207-PG | 366 | CG12207-PG | 1..366 | 1..366 | 1904 | 100 | Plus |
| CG12207-PF | 366 | CG12207-PF | 1..366 | 1..366 | 1904 | 100 | Plus |
| CG12207-PC | 366 | CG12207-PC | 1..366 | 1..366 | 1904 | 100 | Plus |
| CG12207-PB | 366 | CG12207-PB | 1..366 | 1..366 | 1904 | 100 | Plus |
| CG12207-PE | 343 | CG12207-PE | 1..343 | 24..366 | 1777 | 100 | Plus |
